mRNA_P-wetherbeei_contig20842.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A6H5JAV1_9PHAE (Plastocyanin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV1_9PHAE) HSP 1 Score: 199 bits (507), Expect = 1.540e-58 Identity = 107/216 (49.54%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 49 SYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLPPRPV--RLLPDLRQLAPDAELGHFIYEYNQAGKIIRDGANYTWYGINGRPF-DPNYVAHTVTLNRTEEWVVVNQVVGFE--------GCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEI 663
SYLG ++ +F G+L F+DV GD ++ M LP P RLL DLR + PD E+ F++E+N A K+ G YTWYG+NG + + +++ V L EEWVVVNQ G GC GG E T HPFH HVNHFQVVG + GP D+++GDWRDTI +P PGNVT+RW+ADDFTG+ VAHCH+F H+D+GM MNFEI
Sbjct: 228 SYLGQETDVFEGTLAFVDVGGDALD-----MELPEKSPAAAGSDRLLQDLRDI-PDNEVSRFVFEFNAADKVSHLGNTYTWYGVNGVQYTNSSHIMRRVPLGSVEEWVVVNQRKGRGEGEQGLPVGCDRGGPG-EVTADGHPFHLHVNHFQVVG-SSWGDDGP-DWSVGDWRDTISIPTPGNVTIRWRADDFTGEAVAHCHIFGHSDTGMMMNFEI 434
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A835ZAK4_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK4_9STRA) HSP 1 Score: 200 bits (509), Expect = 3.550e-58 Identity = 103/212 (48.58%), Postives = 129/212 (60.85%), Query Frame = 1
Query: 40 EAQSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLPPRPVRLLPDLRQLAPDAELGHFIYEYNQAGKIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVG---FEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEIV 666
+ YLG KS + G+L F+ G V MPLP TLP R + DL AE +I+E+NQ K++R G NYTWYG+NG+ +D V +V L TE+W +VN V G +G G PT+ HPFH HVNH+Q +AA D+ +GDWRDTI VPAPGNVTVRW A DF GK+VAHCHLFSH+D+GM NFE+V
Sbjct: 301 DVDRYLGGKSRVRVGTLAFVTARGPRVRREE-VMPLPPTLPARAL----DLITADVPAER-RWIFEFNQGAKVLRAGRNYTWYGVNGQAYDARVVQRSVPLGATEQWTIVNAVYGEKGLLGGDVGAPPTRDNHPFHLHVNHYQASRACIVDAAPSIYSPDWQIGDWRDTITVPAPGNVTVRWVAADFKGKSVAHCHLFSHSDTGMTANFEVV 506
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A7S2SET7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SET7_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.800e-35 Identity = 85/221 (38.46%), Postives = 112/221 (50.68%), Query Frame = 1
Query: 46 QSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTT-----------LPPRPVRLLPDLRQLAPDAELGHFIYEYNQAG----KIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEI 663
++YLG + + +G V + T+ G L + P P+R DLR P + + EY QAG K+IRDG Y++ GING+ + + V ++ EWV+ N E C +G P +HPFH H NHFQVV + D+ +GDWRDTI VPAPGNVT+RW DF GKTV HCH H D+GM NFEI
Sbjct: 373 RAYLGDGTKISTGDFVHIAFVNTTLPLGTSTASLDVSQRYSIKREEAGYTPEPLR---DLRDEKPAST---HVIEYTQAGPNTPKVIRDGTPYSFLGINGQAYSTKTILK-VKRDQVTEWVIQN-----EWCMDG----TPATESHPFHLHTNHFQVVHITGSLSP---DYKVGDWRDTITVPAPGNVTIRWVPRDFIGKTVMHCHTLGHEDTGMMANFEI 574
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A8K1CHK1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHK1_PYTOL) HSP 1 Score: 138 bits (347), Expect = 4.750e-34 Identity = 81/226 (35.84%), Postives = 112/226 (49.56%), Query Frame = 1
Query: 1 RPGMHRLISVFSAEAQSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLPPRPVRLLPDLRQLAPD----AELGHFIYEYNQAGKIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEIV 666
R + L +V +LGA S +F G L F+ V+G + E G P+ + PP + DLR L+ D + +E+ GK+ +DG Y Y IN F + V + L +EWV++NQ TN HPFH H N FQ+V G D+ +GDWRD I VP PGNVT+R++ DF G VAHCH+ H+D+GM +IV
Sbjct: 456 RESLRPLQAVQDVGVNDFLGASSDVFQGVLAFVHVSGPSREMG----PVTSVPPPPALYAGVDLRTLSDDDRAKMDANPLHFEFTMGGKVKKDGFKYKNYFINHALFSLDNVLREMPLGVVQEWVIINQQDESGKATN---------KNHPFHLHTNAFQIVDMSHGEGV---DYKIGDWRDVIAVPTPGNVTIRFRPVDFKGPVVAHCHILGHSDAGMVALVKIV 665
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A7S3ZJW6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJW6_9STRA) HSP 1 Score: 137 bits (346), Expect = 6.000e-34 Identity = 83/220 (37.73%), Postives = 114/220 (51.82%), Query Frame = 1
Query: 19 LISVFSAEAQSYLGAKSGLFSGSLVFL-----DVAGDTVEEGRGAMPLPTTLPPRPVRLLPDLRQLAPDAELGHFIYEYNQAGKIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEI 663
L S FS E ++YLG+ S ++SGS++ + V ++ G P + P +P L PD E Q G I++DG YT Y ++ D + V + EW +VN G G + P +THPFH H NHFQVV G D+++GDWRDTI +P PGNVT+R++A DF G ++AHCH+FSHAD GM F I
Sbjct: 447 LKSAFSDELKAYLGSGSDVYSGSIIKIRPTASQVVTKDTDDVSGEDPRFPSTPD-----IPSLLAATPDRRA---TLEMVQRGSIVKDGNGYTDYALDVVQGDGS-----VKVGDVVEWTIVNMHKGAPG------EVVPQDTTHPFHLHTNHFQVVATSHGDGV---DYSVGDWRDTITLPTPGNVTIRFRASDFDGPSLAHCHIFSHADLGMLHAFSI 644
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A3M6VS59_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VS59_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.290e-33 Identity = 79/220 (35.91%), Postives = 115/220 (52.27%), Query Frame = 1
Query: 25 SVFSAEAQSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLPPRPVRLLPD--LRQLAPDAELGH----FIYEYNQAGKIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEIV 666
SV + E ++G S L+SG L F+ V G ++ E PL T +PP P L L+ + G F +E+ +++DG Y Y IN FD + + T+TL R +EW+++N+ E T HPFH H N FQ+V G D+ +GDWRD I VP PGNVT+R++ +D+TG VAHCH+ H+D+GM E++
Sbjct: 458 SVKNPELYDFMGNHSDLYSGVLAFVHVQGKSLAE-----PLITAVPPPSELYGPSKSLLDLSAEDRAGMDPLPFAFEFTMGDVVMKDGFYYKPYYINHALFDGSSI-RTMTLGRVQEWIIINR---------RDESGEVTLKNHPFHLHTNAFQIVNMSHGHG---IDYEVGDWRDVISVPTPGNVTIRFRPEDYTGIVVAHCHVLGHSDAGMIAGVEMI 659
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: I2CR18_NANGC (Multicopper oxidase type 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR18_NANGC) HSP 1 Score: 128 bits (321), Expect = 2.020e-32 Identity = 85/229 (37.12%), Postives = 114/229 (49.78%), Query Frame = 1
Query: 52 YLGAKSGLFSGSLVFLDVA--------GDTVEE-------GRGAMPLPTTL---PPRPVR--LLPDLRQLAPDAELGHFIYEYNQAGKIIR-DGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTI---LVPAPGN-VTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEI 663
YLG + ++ G+++ L V GD EE G L +L PPRP DLR P Y + AGK R DG Y+ +G+N + +V + L EEW + +G N HPFH HVNHFQ+VG G D+A+GDWRD+I L+PA G VT+RW+ADD+TGK AHCH+F+H+D+GM+ FEI
Sbjct: 55 YLGNGTDVYEGTIMTLHVERPAEEGKEGDGEEEALAERGGGEEESGLSVSLSLPPPRPPSHPQFQDLRTREPVDPARRLDYVFTTAGKGKRADGFVYSNFGVNNKTLSVQHVQRRIPLGALEEWRLSESDLGTPSVVN-----------HPFHMHVNHFQIVGMSHGEGV---DYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 269
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: D7FH25_ECTSI (Multicopper oxidase, type 1 is implicated in celullar iron transport n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH25_ECTSI) HSP 1 Score: 130 bits (328), Expect = 2.770e-32 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 391 GCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGMAMNFEI 663
GC GG E T HPFH HVNHFQVVG + G GP D+++GDWRDTI +P PGNVT+RW+ADDFTG+ VAHCH+F H+D+GM MNFEI
Sbjct: 344 GCGRGGPG-EVTADGHPFHLHVNHFQVVG-SSWGGDGP-DWSVGDWRDTISIPTPGNVTIRWRADDFTGEAVAHCHIFGHSDTGMMMNFEI 431
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A6A3R1L3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R1L3_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.320e-32 Identity = 78/213 (36.62%), Postives = 112/213 (52.58%), Query Frame = 1
Query: 25 SVFSAEAQSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLPPRPVRLLPD--LRQLAPDAELGH----FIYEYNQAGKIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPFDFALGDWRDTILVPAPGNVTVRWQADDFTGKTVAHCHLFSHADSGM 645
SV + S++G S L+SG L F+ V G++++E PL +PP P P L +L+ + G F +E+ ++DG Y Y IN FD + T+TL R +EWV++N+ E T HPFH H N FQ+V G D+ +GDWRD I VP PGNVT+R++ +D+TG AHCH+ H+D+GM
Sbjct: 469 SVKDPKLHSFMGNHSDLYSGVLAFVHVQGESLDE-----PLIAAVPPPPELYGPSKSLLELSAEDRAGMDPLPFEFEFTMGDPEMKDGFFYKPYYINHALFDGTSI-RTMTLGRVQEWVIINR---------RDESGEVTLKNHPFHLHTNAFQIVDMSHGHGV---DYEIGDWRDVISVPTPGNVTIRFRPEDYTGIVAAHCHILGHSDAGM 663
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Match: A0A2R5GV79_9STRA (Laccase-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV79_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.360e-32 Identity = 82/198 (41.41%), Postives = 108/198 (54.55%), Query Frame = 1
Query: 52 YLGAKSGLFSGSLVFLDVAGDT------VEEGRGAMPLPT----TLPPRPVRLLPDLRQLAPDAELGHFIYEYNQAG----KIIRDGANYTWYGINGRPFDPNYVAHTVTLNRTEEWVVVNQVVGFEGCTNGGGDTEPTQSTHPFHAHVNHFQVVGFEAAAGTGPF--DFALGDWRDTILVPAPGNVTVRWQADDFTG 597
YLG + + +G +V ++V G T +E R + L + T P L DLR+ P + EY Q G KI R+G YT+YGING+P+ P TV L++ EW + N E C +G P +HPFH H NHFQ+V ++ TG + DFA+GDWRDTI VPAPGNVT+RW A DFTG
Sbjct: 396 YLGNGTNIAAGEVVRINVHGKTSNGSSKLESARSGVNLGSESGNTAEP-----LKDLREHEPAVRK---VVEYTQGGPSTPKIEREGNKYTFYGINGQPYSPEIATLTVKLDQVVEWTIRN-----ENCLDGS----PALESHPFHLHTNHFQIVNV-SSPNTGDYSPDFAVGDWRDTIAVPAPGNVTIRWVARDFTG 575 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20842.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20842.1.1 >prot_P-wetherbeei_contig20842.1.1 ID=prot_P-wetherbeei_contig20842.1.1|Name=mRNA_P-wetherbeei_contig20842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp MHRLISVFSAEAQSYLGAKSGLFSGSLVFLDVAGDTVEEGRGAMPLPTTLback to top mRNA from alignment at P-wetherbeei_contig20842:522..1187- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20842.1.1 ID=mRNA_P-wetherbeei_contig20842.1.1|Name=mRNA_P-wetherbeei_contig20842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig20842:522..1187- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20842:522..1187- >mRNA_P-wetherbeei_contig20842.1.1 ID=mRNA_P-wetherbeei_contig20842.1.1|Name=mRNA_P-wetherbeei_contig20842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig20842:522..1187- (Phaeothamnion wetherbeei SAG_119_79)back to top |