mRNA_P-wetherbeei_contig2084.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A6H5L0H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H5_9PHAE) HSP 1 Score: 325 bits (833), Expect = 5.290e-105 Identity = 158/291 (54.30%), Postives = 206/291 (70.79%), Query Frame = 2
Query: 173 IQGRWSDLKIVLVCWVGLFVAGTAVGLVLPSSTTLNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVV-SGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICYRGAGA 1042
++GR D + L+ + V G A+G VLP+S L+G Y+ +S ++GWTYF SWS+SFYPQV+ N+RRKT+ GLS DF L N+L F+CY+AFTC+ WS QRAY++ H G PNKV+ ND FALHA ++ TL Q+ +YDWR R+QRPS A+A + S + YA V +G D G L+WL LY+LSY+K+ I+KY+PQV+LN RR ST GW++WNVILDLTGGLLS++QL+ DC TGDW GI+GYP KFA+GFVS+FFD IFL QHY+ Y GA
Sbjct: 34 VRGR-GDPALALLILGFIVVVGVALGSVLPASDELHGPYRRISAIIGWTYFCSWSVSFYPQVLLNYRRKTSVGLSFDFLLYNVLAFSCYSAFTCSLHWSKFMQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYAVSVWAGQTTRGNGSDRGLLNWLDFLYFLSYVKVVTGIIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQHYVLYPQPGA 323
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A836C9F4_9STRA (Putative lysosomal cystine transporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F4_9STRA) HSP 1 Score: 294 bits (752), Expect = 9.090e-94 Identity = 143/268 (53.36%), Postives = 186/268 (69.40%), Query Frame = 2
Query: 224 LFVAGTAVGLVLPSSTTLNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY 1027
L AG + VLP + L+G Y+ +S ++GW YF +WS+SFYPQV+ N+RRKTT GLS DFQL NLLGF CY+ +T AF+WS QR YE H+G NK+EPNDVAFA+HA+A+T VT+ Q+ +YD + RPSR A++ V AT + ++A V A + G + P W L +S++K+ V++VKYIPQ LN RRRST GWS++NV+LD TGGLLS+LQLL DC T DWSGI G P KF LG S+ FD +FL QHY+ Y
Sbjct: 16 LISAGVVLAFVLPPNEKLHGPYRRISAIIGWIYFLAWSVSFYPQVVLNYRRKTTIGLSFDFQLYNLLGFTCYSIYTSAFYWSTAVQREYEHSHNGNSNKIEPNDVAFAIHAVAITCVTIAQVIYYD-HVSGHRPSRVAISAVLATTAFLAVHAVVA----AILSPGASHPFHWTDWLSAVSFVKLAVTLVKYIPQAALNARRRSTQGWSIYNVLLDFTGGLLSLLQLLLDCGNTRDWSGIVGTPVKFGLGLTSMVFDVVFLTQHYVLY 278
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: D7FJH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH4_ECTSI) HSP 1 Score: 288 bits (738), Expect = 1.510e-91 Identity = 135/234 (57.69%), Postives = 174/234 (74.36%), Query Frame = 2
Query: 329 SWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYA-AVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY 1027
SWS+SFYPQV+ N+RRKT+ GLS DF L N+L F+CY+AFTC+ +WS + QRAY++ H G PNKV+ ND FALHA ++ TL Q+ +YDWR R+QRPS A+A + S + YA +V +G D G L+WL LY+LSY+K+ I+KY+PQV+LN RR ST GW++WNVILDLTGGLLS++QL+ DC TGDW GI+GYP KFA+GFVS+FFD IFL QHY+ Y
Sbjct: 25 SWSVSFYPQVLLNYRRKTSVGLSFDFLLYNVLAFSCYSAFTCSLYWSKSVQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYALSVWAGRTTRGNGSDRGLLNWLDFLYFLSYVKVVTGIIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQHYVLY 258
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A087SL29_AUXPR (Cystinosin n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SL29_AUXPR) HSP 1 Score: 267 bits (682), Expect = 2.770e-83 Identity = 142/282 (50.35%), Postives = 181/282 (64.18%), Query Frame = 2
Query: 236 GTAVGLVLPSSTTLNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGT-----LAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICYRGAGAFGGDGEDG 1066
G VGL LPS+ L VSP++GWTYF +WS+SFYPQV N+ RK+ +GLS+DFQ+LNLLGF CYA + + +W+A + AY VH G V NDV FALHA LT+VTL Q Y R PSR +A V AT G++ YAA + N + +WL LLY +S +K+ VS+VKYIPQV+LNHR RST GW+VWNV+LD GG LS+ Q++ D +V GDWS I+G P KFALGFVS+FFD IF+ QH + G +GE+G
Sbjct: 2 GLIVGLSLPSNPELPAPLNIVSPIIGWTYFAAWSVSFYPQVWLNYTRKSVSGLSLDFQILNLLGFICYAVYNVSLYWNAAIREAYRLVHGGNSPAVHANDVFFALHAAVLTMVTLAQSLAYP--SSRTPPSRLCVAAVVATSGAVLAYAAALYWAPGLHPSCLNGCTEGTWFTWLNLLYLVSLVKLAVSLVKYIPQVILNHRLRSTRGWNVWNVLLDFEGGALSLAQMIIDNSVCGDWSAITGNPVKFALGFVSMFFDVIFVGQHVAFGKRRGVQDAEGEEG 281
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A7S4DB46_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB46_HETAK) HSP 1 Score: 268 bits (685), Expect = 4.480e-83 Identity = 141/296 (47.64%), Postives = 183/296 (61.82%), Query Frame = 2
Query: 164 EGDIQGRWSDLK--------IVLVCWVGLFVAGTAVGLVLPSSTTLNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY 1027
+ D G W +K +V C + AG +GLVLP S+ L +YKY+S ++G+TYF +WS+SFYPQV NW RK+T GLS DF+ N LGF Y+ F F++ Q Y + HDG NKV NDV FA+HAL +TV+T+ Q+ +YD R L G+ A G L L+WLG LY+LSY+K+ +++VKYIPQ LN+RRRST GWS+ NV+LD GGLLS+LQL+ DC TGDW GI+G P KF LGFVSIFFD IF++QHYI +
Sbjct: 38 KADKNGIWPSIKSFACSRHALVFFC---VTFAGVVLGLVLPPSSNLPKKYKYISNIIGYTYFVAWSISFYPQVWLNWCRKSTRGLSFDFEAYNFLGFLTYSVFNLCFYFVPAIQDEYRKTHDGNDNKVALNDVCFAVHALIITVITIMQMRYYDRYQTRASWVGCLLLGI-----GFLCIAGYAGGVLLLRRR-----LTWLGWLYFLSYVKMAITVVKYIPQAYLNYRRRSTAGWSIGNVLLDALGGLLSVLQLILDCHATGDWGGITGDPVKFGLGFVSIFFDVIFMLQHYILF 320
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A7S1Z196_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z196_TRICV) HSP 1 Score: 263 bits (672), Expect = 1.900e-80 Identity = 141/272 (51.84%), Postives = 181/272 (66.54%), Query Frame = 2
Query: 218 VGLFVAGTAVGLVLPSSTTLNGR-YKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAY-ERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY 1027
+ L + G A+GL++P + L Y+ VS V+G+ YF SWS+SFYPQVI N+RRK+TTGLS DF +LN++GFACYA +TC F+WS + Y +R + V+ NDVAFA+HAL L V +GQI Y R Q + G+ I YAA++ G L WL LY LS++K+ +S+VKYIPQV+LN RR STVGW++WN+ILD TGG+LSI+QL+GD A GDWSGI G PAKFALGFVSI FD IF +QHY Y
Sbjct: 107 LSLTLVGGAIGLIMPRDSALKSPWYRIVSSVVGYIYFLSWSVSFYPQVILNFRRKSTTGLSNDFSVLNVVGFACYATYTCFFYWSNAIKGEYKQRNGEDSEITVQSNDVAFAVHALVLCAVQVGQISIYGG-FRMQPLAMFVKLGMFFGAVIILAYAALIL-----LQVGPGNGLLWLDFLYLLSFVKVAISVVKYIPQVILNIRRESTVGWNIWNIILDFTGGMLSIMQLIGDSADMGDWSGIIGNPAKFALGFVSIIFDIIFFLQHYFLY 372
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A8H7SE43_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SE43_9FUNG) HSP 1 Score: 254 bits (650), Expect = 4.470e-78 Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 2
Query: 275 LNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICYR 1030
++ ++ +S ++GW YF +WS+SFYPQ I NWRRK+ GLS+DF N+LGF CY+ F AFF S Q Y++ ++G N V NDV FALHA+ ++ TL Q F+Y R Q+ S PA G I L + G A +G W+ L+YYLSYIK+GV+IVKY+PQV +N +R+STVGWS++N++LD TGG+LS+ QLL D ++GDWSG+SG P KF LGFVSIFFD F+ QHYI YR
Sbjct: 14 VSWAWRIISSIIGWIYFLAWSISFYPQAILNWRRKSVQGLSIDFLYYNVLGFTCYSIFNVAFFASKEIQEEYKQRNNGSENLVRINDVVFALHAVVISSFTLSQTFYYK-RSPNQKSSLPA-------RGLIWLS---ILGAFLVVLAVKSGHAHWIDLMYYLSYIKLGVTIVKYLPQVWINFKRKSTVGWSIYNILLDFTGGVLSVAQLLLDAYLSGDWSGVSGDPVKFGLGFVSIFFDLFFMTQHYILYR 254
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A7S4REA9_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4REA9_9STRA) HSP 1 Score: 257 bits (656), Expect = 8.040e-78 Identity = 143/286 (50.00%), Postives = 184/286 (64.34%), Query Frame = 2
Query: 221 GLFVA---GTAVGLVLPSSTTL-NGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVH---DGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRP---SRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY---RGAG 1039
GLF+ GT +G+ LP ++L Y+ S ++G+ YF +WS+SFYPQ+ N+RRK T GLSVDF +N+LGFACYA + + FWS Q Y + H + IP V NDVAFALHA L+ +TLGQI++YD Q S GVA + + A+VS LSWLG LY LSY+K+ ++++KYIPQV+LN RR+STVGW++WN+ILD TGG+LS+ QLLGD A DWSGI+G AKF LGFVSIFFD IF QHY+ Y RG G
Sbjct: 116 GLFLIICIGTVLGVSLPKESSLPTPWYRTFSSIIGYVYFTAWSISFYPQIFMNYRRKRTVGLSVDFSAMNVLGFACYAVYNASLFWSPYIQNLYRQNHAAGESIP--VRSNDVAFALHAFVLSSITLGQIWYYDGFGTSQTKMSFSVKLFFGVAFLVLVFSTLVAIVS-----------SKLSWLGFLYILSYVKVVITLLKYIPQVVLNVRRKSTVGWNIWNIILDFTGGMLSLAQLLGDSADMHDWSGITGNFAKFCLGFVSIFFDIIFFFQHYVLYPDKRGEG 388
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A024UGL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGL0_9STRA) HSP 1 Score: 250 bits (639), Expect = 1.360e-76 Identity = 133/276 (48.19%), Postives = 176/276 (63.77%), Query Frame = 2
Query: 218 VGLFV-AGTAVGLVLPSSTTLN--GRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICYRGA 1036
VGL V A T +GL + +T N Y +S V+GW YF WS+SF+PQV NWRR++ GLS+DF + N+LGF CYA F AF+WS Q Y++ HDG PN V+ NDV FALHA+ +T++T Q Y R + +L M I + G + +N T L LY LSY+K+GVS+VKYIPQV+LN++R+STVGW++WNV+LD TGG LS+ Q++ +VT DWS I+G P KF LGF S+FFD IF+ QHY+ Y GA
Sbjct: 34 VGLSVIAATGIGLGFATDSTDNIPQPYNRISSVIGWVYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFVCYAVFNAAFYWSDAIQDEYKKHHDGHPNAVQVNDVFFALHAVFVTLLTYYQTTIYT----RGTQTTSSLCKSVVGMSVIVSGVFFLLGFIVSNEWFST-----LNFLYLLSYVKLGVSLVKYIPQVILNYQRKSTVGWTIWNVLLDFTGGTLSMAQIMLTSSVTNDWSAITGDPVKFGLGFTSVFFDVIFITQHYVLYPGA 300
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Match: A0A6G0WBP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP7_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.720e-76 Identity = 122/266 (45.86%), Postives = 169/266 (63.53%), Query Frame = 2
Query: 230 VAGTAVGLVLPSSTTLNGRYKYVSPVMGWTYFFSWSLSFYPQVISNWRRKTTTGLSVDFQLLNLLGFACYAAFTCAFFWSATSQRAYERVHDGIPNKVEPNDVAFALHALALTVVTLGQIFWYDWRLRRQRPSRPALAGVAATMGSITLYAAVVSGTLAANAAGDTGPLSWLGLLYYLSYIKIGVSIVKYIPQVMLNHRRRSTVGWSVWNVILDLTGGLLSILQLLGDCAVTGDWSGISGYPAKFALGFVSIFFDAIFLMQHYICY 1027
V G +G S+ + Y +S ++GW YF WS+SF+PQV NWRR++ GLS+DF + N+LGF CYA F CAFFW+ T QR Y + HDG N V+ NDV FALHA+ +T+ T Q Y + + + G + + ++ + ++ LS L LY LSY+K+GVS+VKYIPQV+LN+ R+ST GW++WNV+LD TGG+LS+ Q++ AVT DWS I+G P KF LGF S+FFD IF++QHY+ Y
Sbjct: 29 VTGFGLGFGTDSTDNIPAPYNRISSIVGWIYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFLCYAIFNCAFFWNDTVQREYAKFHDGHRNAVQVNDVFFALHAVFVTIFTYYQTTIYTRGGQVVSTTCKTIVGGSLIVSAVFFLLGYIV---------NSEVLSALNFLYLLSYVKLGVSLVKYIPQVILNYERKSTAGWTIWNVLLDFTGGMLSMAQIIMTSAVTNDWSAITGDPVKFGLGFTSVFFDIIFIVQHYVLY 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2084.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2084.1.1 >prot_P-wetherbeei_contig2084.1.1 ID=prot_P-wetherbeei_contig2084.1.1|Name=mRNA_P-wetherbeei_contig2084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=345bp MDTSYTILDDESSTKRKGRKRNMGEGDIQGRWSDLKIVLVCWVGLFVAGTback to top mRNA from alignment at P-wetherbeei_contig2084:3079..5213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2084.1.1 ID=mRNA_P-wetherbeei_contig2084.1.1|Name=mRNA_P-wetherbeei_contig2084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2135bp|location=Sequence derived from alignment at P-wetherbeei_contig2084:3079..5213+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2084:3079..5213+ >mRNA_P-wetherbeei_contig2084.1.1 ID=mRNA_P-wetherbeei_contig2084.1.1|Name=mRNA_P-wetherbeei_contig2084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig2084:3079..5213+ (Phaeothamnion wetherbeei SAG_119_79)back to top |