mRNA_P-wetherbeei_contig2083.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2083.6.1
Unique NamemRNA_P-wetherbeei_contig2083.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A0D7BVL6_9AGAR (MFS monosaccharide transporter n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BVL6_9AGAR)

HSP 1 Score: 57.4 bits (137), Expect = 3.600e-8
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G  L+T++NWA+N  +G ITP  L      GTFL+F V  FVAYL+A   +PET G
Sbjct:  444 GAALATSSNWANNFFVGLITPTTLERSPA-GTFLLFAVFCFVAYLWATYAVPETAG 498
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A4S8LHJ3_DENBC (General substrate transporter n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8LHJ3_DENBC)

HSP 1 Score: 52.8 bits (125), Expect = 1.530e-6
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ LSTA+NW +N ++G +TP  +    + GTF++F V  F AYL++  ++PET  
Sbjct:  346 GVALSTASNWINNFLVGLVTPVTIDYSPS-GTFMMFAVAAFFAYLWSTYSVPETAN 400
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: UPI001E8CBCD4 (general substrate transporter n=1 Tax=Lentinula edodes TaxID=5353 RepID=UPI001E8CBCD4)

HSP 1 Score: 52.8 bits (125), Expect = 1.540e-6
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ LSTA+ W +N +IG ITP  L      GTF++F V +F+AY++   N+PET  
Sbjct:  468 GVALSTASVWVNNFLIGLITPVTL-EWSAAGTFMMFAVASFLAYIWVTYNVPETAN 522
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A4V4HEE2_DENBC (General substrate transporter n=2 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4V4HEE2_DENBC)

HSP 1 Score: 52.8 bits (125), Expect = 1.540e-6
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ LSTA+NW +N ++G +TP  +    + GTF++F V  F AYL++  ++PET  
Sbjct:  473 GVALSTASNWINNFLVGLVTPVTIDYSPS-GTFMMFAVAAFFAYLWSTYSVPETAN 527
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A1Q3E398_LENED (Mfs monosaccharide n=2 Tax=Lentinula edodes TaxID=5353 RepID=A0A1Q3E398_LENED)

HSP 1 Score: 52.8 bits (125), Expect = 1.550e-6
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ LSTA+ W +N +IG ITP  L      GTF++F V +F+AY++   N+PET  
Sbjct:  801 GVALSTASVWVNNFLIGLITPVTL-EWSAAGTFMMFAVASFLAYIWVTYNVPETAN 855
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A0D0BMP7_9AGAR (MFS domain-containing protein n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0BMP7_9AGAR)

HSP 1 Score: 50.8 bits (120), Expect = 7.400e-6
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ LSTA+ W +N +IG ITP  L      GTF++F V +F+AY++   ++PET  
Sbjct:  460 GVALSTASVWVNNFLIGLITPVTL-EWSAAGTFMMFAVASFLAYIWVTYSVPETAN 514
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A317V4U0_9EURO (MFS quinate transporter n=1 Tax=Aspergillus heteromorphus CBS 117.55 TaxID=1448321 RepID=A0A317V4U0_9EURO)

HSP 1 Score: 50.1 bits (118), Expect = 1.380e-5
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ +  AA W SN V  F TPY+L     W TFL+F +L  V  LF    +PETRG
Sbjct:  423 GVAIGVAAQWLSNFVWSFSTPYVLAGAK-WATFLIFGILDAVFALFVWMVLPETRG 477
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A6A4IAQ3_9AGAR (General substrate transporter n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4IAQ3_9AGAR)

HSP 1 Score: 50.1 bits (118), Expect = 1.380e-5
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G++LSTA+ W +N ++G ITP  L      GTF++F V +F AY++    +PET  
Sbjct:  467 GVSLSTASVWINNFIVGLITPLTL-EWSAAGTFMMFAVASFFAYIWVTYTVPETAN 521
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: A0A5M3MN19_CONPW (General substrate transporter n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MN19_CONPW)

HSP 1 Score: 50.1 bits (118), Expect = 1.390e-5
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETRG 169
            G+ L+TA+NW +N +IG +TP M+  +   GTF VF V  F AYL+    +PET  
Sbjct:  486 GVALATASNWLNNFLIGLVTPAMM-AISPAGTFGVFSVACFGAYLWVTNAVPETAN 540
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BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Match: J3P8I6_GAET3 (High-affinity glucose transporter n=2 Tax=Magnaporthaceae TaxID=81093 RepID=J3P8I6_GAET3)

HSP 1 Score: 49.7 bits (117), Expect = 1.890e-5
Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 2 
Query:    2 GMTLSTAANWASNTVIGFITPYMLHNLDTWGTFLVFCVLTFVAYLFAAQNIPETR 166
            G+ L  ++NW +N ++G +TP ML ++ T+GT+L+F +LTF+   F    +PET+
Sbjct:  460 GVALGASSNWMNNFIVGQVTPIMLQSI-TYGTYLIFGILTFMGAGFIWFFVPETK 513
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2083.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D7BVL6_9AGAR3.600e-850.00MFS monosaccharide transporter n=1 Tax=Cylindrobas... [more]
A0A4S8LHJ3_DENBC1.530e-641.07General substrate transporter n=1 Tax=Dendrothele ... [more]
UPI001E8CBCD41.540e-644.64general substrate transporter n=1 Tax=Lentinula ed... [more]
A0A4V4HEE2_DENBC1.540e-641.07General substrate transporter n=2 Tax=Dendrothele ... [more]
A0A1Q3E398_LENED1.550e-644.64Mfs monosaccharide n=2 Tax=Lentinula edodes TaxID=... [more]
A0A0D0BMP7_9AGAR7.400e-642.86MFS domain-containing protein n=1 Tax=Gymnopus lux... [more]
A0A317V4U0_9EURO1.380e-546.43MFS quinate transporter n=1 Tax=Aspergillus hetero... [more]
A0A6A4IAQ3_9AGAR1.380e-541.07General substrate transporter n=1 Tax=Gymnopus and... [more]
A0A5M3MN19_CONPW1.390e-544.64General substrate transporter n=1 Tax=Coniophora p... [more]
J3P8I6_GAET31.890e-540.00High-affinity glucose transporter n=2 Tax=Magnapor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2083contigP-wetherbeei_contig2083:3667..3993 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size175
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Cds size174
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186209.7376122-CDS-P-wetherbeei_contig2083:3666..37541683186209.7376122-CDS-P-wetherbeei_contig2083:3666..3754Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2083 3667..3754 +
1683186209.7495706-CDS-P-wetherbeei_contig2083:3906..39921683186209.7495706-CDS-P-wetherbeei_contig2083:3906..3992Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2083 3907..3992 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2083.6.1prot_P-wetherbeei_contig2083.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2083 3667..3992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2083.6.1

>prot_P-wetherbeei_contig2083.6.1 ID=prot_P-wetherbeei_contig2083.6.1|Name=mRNA_P-wetherbeei_contig2083.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp
GHDSVDGGQLGFQHGHRLHHTVHAAQSRHVGNIFGLLRAYFRRLFVRGAK
HPRDTRHG
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mRNA from alignment at P-wetherbeei_contig2083:3667..3993+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2083.6.1 ID=mRNA_P-wetherbeei_contig2083.6.1|Name=mRNA_P-wetherbeei_contig2083.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig2083:3667..3993+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCATGACTCTGTCGACGGCGGCCAACTGGGCTTCCAACACGGTCATCG
GCTTCATCACACCGTACATGCTGCACAATCTCGACACGGTGAGTAGCAAA
GAGAGCCTTAGCAGAAATGCGACAGTGTTTTCTTTTTAAGTAAAAGCCCA
TGTTTCCCTTTCTTGTCTGACACAGATATTACCCAACCCTTAAATCACGC
TCCCTCCACTCTCTTGTCTCTGTCTCTCTCTCGTGTGCAGTGGGGAACAT
TTTTGGTCTTCTGCGTGCTTACTTTCGTCGCTTATTTGTTCGCGGCGCAA
AACATCCCCGAGACACGCGGCACGGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2083:3667..3993+

>mRNA_P-wetherbeei_contig2083.6.1 ID=mRNA_P-wetherbeei_contig2083.6.1|Name=mRNA_P-wetherbeei_contig2083.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig2083:3667..3993+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCATGACTCTGTCGACGGCGGCCAACTGGGCTTCCAACACGGTCATCG
GCTTCATCACACCGTACATGCTGCACAATCTCGACACGTGGGGAACATTT
TTGGTCTTCTGCGTGCTTACTTTCGTCGCTTATTTGTTCGCGGCGCAAAA
CATCCCCGAGACACGCGGCACGGA
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