mRNA_P-wetherbeei_contig2083.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: W7T921_9STRA (Mfs monosaccharide transporter n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T921_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.780e-30 Identity = 63/120 (52.50%), Postives = 79/120 (65.83%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKELWS 917
YQ+E AP KVRG++V++ QL IT GILLA LN+G W +GWR SYG GFF+ L LLMI LPE+PRWLV G+ E A+ LGR EVE IE A+ E+ ++ G WK+L S
Sbjct: 218 YQSETAPPKVRGLVVSIQQLSITAGILLAGGLNVGLQHWDEGWRISYGGKGFFSLLLMLLMICLPESPRWLVAQGKSEAAKASLGRIRQEEEVEGELAGIEEAVEAEAQMEKGAWKDLVS 337
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A4D9CY86_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY86_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.990e-28 Identity = 63/127 (49.61%), Postives = 79/127 (62.20%), Query Frame = 3
Query: 558 YQAEMAPEKV-------RGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKELWS 917
YQ+E AP KV RG++V++ QL IT GILLA LN+G W +GWR SYG GFF+ L LLMI LPE+PRWLV G+ E A+ LGR EVE IE A+ E+ ++ G WK+L S
Sbjct: 171 YQSETAPPKVADFPFDVRGLVVSIQQLSITAGILLAGGLNVGLQHWDEGWRISYGGKGFFSLLLMLLMICLPESPRWLVAQGKSEAAKASLGRIRQEEEVEGELAGIEEAVEAEAQMEKGAWKDLVS 297
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A836C7Y4_9STRA (General substrate transporter n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y4_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.860e-24 Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVE 839
YQ+E+APE +RG+LV L QL ITFGI LAA N+G WS+GWR SY NGF + AL +LM+ PE+PRWL + G+ E+AR VL + YEV+
Sbjct: 158 YQSEIAPESIRGLLVALQQLSITFGIFLAALANVGLKTWSEGWRLSYCGNGFLSFALIILMMFCPESPRWLYKVGKVEQARAVLHKVRQDYEVD 251
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A4D9CNV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNV7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.290e-20 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 3
Query: 585 VRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAI 869
VRG++V++ +L IT GILLA LN+G W +GWR SYG GFF+ L LLM+ LPE+P WLV G+ E A+ LG EVE +EAA+
Sbjct: 12 VRGLVVSIKKLSITAGILLAGGLNVGLQHWDEGWRISYGDKGFFSLLLMLLMLCLPESPCWLVAQGKSETAKAFLGGIRQGDEVEGELAGMEAAV 106
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A6I6S0U3_9ACTN (Sugar porter family MFS transporter n=3 Tax=Streptomyces TaxID=1883 RepID=A0A6I6S0U3_9ACTN) HSP 1 Score: 94.4 bits (233), Expect = 5.830e-18 Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKEL 911
Y +E+AP +RG LV+ N L I G LLA +N W + WR+ GL A ALFL ++ LP+TPRW + GRP+EA VL RT + +V A +I+ A + E+D G W+EL
Sbjct: 161 YLSEIAPPHIRGRLVSFNSLMIVSGQLLAYLINAVLAHW-EAWRWMLGLAALPAVALFLGVLFLPDTPRWYISRGRPDEAAAVLHRTLPADDVPAELGRIDRARSLEADAQRGAWREL 277
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A166SQL3_9EURY (MFS transporter n=1 Tax=Haladaptatus sp. R4 TaxID=1679489 RepID=A0A166SQL3_9EURY) HSP 1 Score: 93.6 bits (231), Expect = 9.810e-18 Identity = 56/119 (47.06%), Postives = 71/119 (59.66%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKELW 914
Y +E+AP K+RG LV+LNQL +T GILLA +N F GWR+ G AAAL L M+ +PE+PRWLV+NGR +EAR VL RT +E + IE E + DA E W
Sbjct: 128 YNSEIAPPKIRGSLVSLNQLAVTSGILLAYLVNYVFKG-PGGWRWMLGSGVVPAAALALGMLFMPESPRWLVENGRLDEARSVLSRTRSEDRIEEEIQNIEETAKVEEN-DASTLLESW 244
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: UPI001FF39A2C (sugar porter family MFS transporter n=1 Tax=Halovarius sp. SQT-29-1 TaxID=2931975 RepID=UPI001FF39A2C) HSP 1 Score: 92.4 bits (228), Expect = 2.460e-17 Identity = 51/108 (47.22%), Postives = 69/108 (63.89%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEES 881
Y +E++P K+RG LV+LNQL IT GIL+A +N F++ + WR+ GL AA LFL M+ +PE+PRWL + GR AR VL RT +V+A R+I I ES
Sbjct: 138 YISEISPPKIRGSLVSLNQLTITSGILIAYLVNFAFSDGGE-WRWMLGLGMVPAAVLFLGMVFMPESPRWLYEQGRESAARDVLSRTRAEAKVDAELREIRETIRTES 244
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A839DY93_9PSEU (Sugar porter (SP) family MFS transporter n=2 Tax=Halosaccharopolyspora lacisalsi TaxID=1000566 RepID=A0A839DY93_9PSEU) HSP 1 Score: 91.7 bits (226), Expect = 4.350e-17 Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKELWS 917
Y AE++P ++RG L +LNQL IT GILLA ++ W + WR+ GL A ALF+ M+ +PETPRWL R +EAR VL RT E++ +IEAA + + +AG W++L S
Sbjct: 132 YIAEISPTRIRGTLTSLNQLLITTGILLAYVVDYALAPW-EAWRWMLGLGVIPAVALFVGMLFMPETPRWLASRNRMDEAREVLERTRAPEEIDEAFEEIEAAERQARE-EAG-WRDLTS 248
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A4R6S795_9PSEU (Sugar porter (SP) family MFS transporter n=1 Tax=Labedaea rhizosphaerae TaxID=598644 RepID=A0A4R6S795_9PSEU) HSP 1 Score: 91.7 bits (226), Expect = 4.350e-17 Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 3
Query: 528 SSARPTNERRYQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEESDIDAGKWKELWS 917
SS PT Y AE+AP K RG + LNQ+FI GIL+A ++ G S WR + A LF +++LPETPRWL++NGR EEAR VL TH + +VE +I I +++ G+ ++LW+
Sbjct: 121 SSTVPT----YMAELAPAKWRGAMGALNQIFIVLGILIAFLVSYGLGS-SSNWRLMFAGAIVPAVVLFFGLMLLPETPRWLLKNGREEEARAVLQSTHRAGDVEGEITQIREVIRLDTE-QKGRVRDLWA 244
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Match: A0A5P9P1V8_9EURY (Sugar porter family MFS transporter n=1 Tax=Natronorubrum aibiense TaxID=348826 RepID=A0A5P9P1V8_9EURY) HSP 1 Score: 91.3 bits (225), Expect = 6.140e-17 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 3
Query: 558 YQAEMAPEKVRGMLVTLNQLFITFGILLAAALNIGFNEWSQGWRFSYGLNGFFAAALFLLMIVLPETPRWLVQNGRPEEARVVLGRTHHSYEVEATARKIEAAIAEES 881
Y +E++P K+RG LV+LNQL IT GIL+A +N F+ + WR+ GL AA LF+ M+ +PE+PRWL + GR +AR VL RT V+ R+I+ I ES
Sbjct: 140 YISEISPPKIRGSLVSLNQLTITSGILIAYLVNYAFSSGGE-WRWMLGLGMIPAAVLFVGMVFMPESPRWLYEQGRESDARAVLSRTRTESRVDEELREIKTTIKTES 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2083.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2083.2.1 >prot_P-wetherbeei_contig2083.2.1 ID=prot_P-wetherbeei_contig2083.2.1|Name=mRNA_P-wetherbeei_contig2083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp MCRPSARSSSRWIFRCCTSAASSAASASAASAWSPQCELPRLHCFFLLALback to top mRNA from alignment at P-wetherbeei_contig2083:1145..2328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2083.2.1 ID=mRNA_P-wetherbeei_contig2083.2.1|Name=mRNA_P-wetherbeei_contig2083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1184bp|location=Sequence derived from alignment at P-wetherbeei_contig2083:1145..2328+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2083:1145..2328+ >mRNA_P-wetherbeei_contig2083.2.1 ID=mRNA_P-wetherbeei_contig2083.2.1|Name=mRNA_P-wetherbeei_contig2083.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig2083:1145..2328+ (Phaeothamnion wetherbeei SAG_119_79)back to top |