mRNA_P-wetherbeei_contig20820.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20820.1.1
Unique NamemRNA_P-wetherbeei_contig20820.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI001BA902C6 (CHAD domain-containing protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BA902C6)

HSP 1 Score: 435 bits (1118), Expect = 1.750e-151
Identity = 222/301 (73.75%), Postives = 250/301 (83.06%), Query Frame = 1
Query:    1 MKGAGQTTLHVQRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            MKGAG+T + + RKAAS  +FDCATAFQKIALDCV  VRLHHSSACAGD E+VHQIRVA TRLR+AV FFA I VD EWRRLKKEL WLN SLGAARDSDV VEYA R+RYR WAQ MIG  LDA Q RDHRRMVR LRS R HD+I+AMSGWI  G WL RW+R  RR  A+PL+AYC+RELNRWR+RLIRKGRRLK LGASDRH+LRI AKRFRYMLEALTG+VPVF  G FRHVH PA  LQR LGDLRDL+RFAR G+SA+GD+ G+ RPPGY R+R++LR AA++AY  L+D+G C
Sbjct:    1 MKGAGKTKMGL-RKAASAIQFDCATAFQKIALDCVGKVRLHHSSACAGDAEAVHQIRVAITRLRSAVFFFASIVVDAEWRRLKKELAWLNGSLGAARDSDVVVEYARRERYRDWAQRMIGEDLDAHQTRDHRRMVRCLRSPRFHDLIEAMSGWIGGGSWLPRWERMLRRKSARPLKAYCKRELNRWRRRLIRKGRRLKALGASDRHRLRIRAKRFRYMLEALTGIVPVFGDGEFRHVHKPARQLQRTLGDLRDLKRFARLGLSAQGDNPGQRRPPGYSRQRQRLRSAAISAYRGLKDAGAC 300          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI00200056E5 (CHAD domain-containing protein n=1 Tax=Bradyrhizobium sp. 200 TaxID=2782665 RepID=UPI00200056E5)

HSP 1 Score: 355 bits (910), Expect = 7.370e-120
Identity = 186/302 (61.59%), Postives = 221/302 (73.18%), Query Frame = 1
Query:   13 GQTTLHVQRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVS-----AEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            GQT    + KA   A FDCATAFQK+ LDCVA ++ HHSSACAGD E+VHQIRVA TRLRAAV+FF PI +D EWR LKKE+ WLN  LG ARDSDV VEYA RKRYR W+Q +IG HLD RQ RDHR +VR LRS+R   ++ AM+ WI  G WL R+KR   R DA+ L++YC  +LNRW +RL+RKGR LKTLGAS RH+LRI+AKRFRYMLEALT  V ++ R  F H+H PA  LQR LGD+RDLERFA  G++     AE    G+  PPG+R RR+KL  AAMAAY  L+ +G C
Sbjct:    4 GQTRTAGRHKAVEAAGFDCATAFQKMTLDCVAAIKAHHSSACAGDAEAVHQIRVAITRLRAAVAFFGPIVIDAEWRHLKKEIAWLNGPLGTARDSDVVVEYARRKRYRAWSQRVIGEHLDQRQMRDHRSLVRCLRSVRTQRLVTAMTSWIRQGPWLERYKR---RKDAEALQSYCAGKLNRWHQRLVRKGRHLKTLGASRRHRLRIKAKRFRYMLEALTDTVALWGRDEFHHLHRPAKRLQRTLGDMRDLERFA--GLADGPPKAEDGRRGEKHPPGFRDRREKLLDAAMAAYRDLKHAGAC 300          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI001FFF2F9C (CHAD domain-containing protein n=1 Tax=Bradyrhizobium sp. 170 TaxID=2782641 RepID=UPI001FFF2F9C)

HSP 1 Score: 346 bits (887), Expect = 2.290e-116
Identity = 184/300 (61.33%), Postives = 222/300 (74.00%), Query Frame = 1
Query:   13 GQTTLHVQRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSA-----EGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSG 897
            GQT    + KA+     DCATAFQK+ LD VA ++ HHSSACAGD E+VHQIRVA TRLRAAV+FFAPI VD EWRRLK+E+ WLN  LGAARDSDV VEYA RKRYR WAQ MIG  LD RQ RDHRR+VR LRS+R   ++ AM+ WI  G WL+R+KR   R  A+ L++YC  EL+RW +RL+RKG+RLKTLGAS RH+LRI+AKRFRYMLEAL+  V ++ RG F H H PA  LQRALGD+RDLERFA  G+++     E    GK  PPGYR R++KL   A+AA+  L+ +G
Sbjct:    4 GQTRTSGRHKASEAVGLDCATAFQKMTLDSVAAIKAHHSSACAGDAEAVHQIRVAITRLRAAVAFFAPIVVDAEWRRLKEEIAWLNGPLGAARDSDVVVEYARRKRYRAWAQDMIGEQLDQRQMRDHRRLVRCLRSVRTQRLVAAMAAWIRQGPWLQRYKR---RKHAEALQSYCAGELDRWHERLVRKGKRLKTLGASRRHRLRIKAKRFRYMLEALSETVTLWGRGEFHHRHRPAKRLQRALGDMRDLERFA--GLASGSPQVENGKRGKKHPPGYRHRKEKLLGDAIAAHHDLKSAG 298          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI001BA8B797 (CHAD domain-containing protein n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0283 TaxID=2807671 RepID=UPI001BA8B797)

HSP 1 Score: 345 bits (885), Expect = 4.610e-116
Identity = 184/293 (62.80%), Postives = 216/293 (73.72%), Query Frame = 1
Query:   34 QRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRG---VSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            +RKA   A  DCATAFQKIALDCVA ++ HH+SACAGD E+VHQIRVA TRLRAAV+FFA I VD +W RL+KE+ WLN SLGAARDSDV VEYA RKRYR W Q MIG+ LD  Q +DHRR+VR LRS+R   +I AM+ WI  G WL R KR E   DA+ L++YC RELNRW +RL+RKGR LKTLGAS RH+LRI+AK FRYMLEALT  V    R  +RH+H PA  LQR LGD+RDLERFA        AE    G+  PPGYRR+R+KL  AA+AA+  L+ +G C
Sbjct:   11 RRKAPVAAAPDCATAFQKIALDCVAAIKAHHTSACAGDAEAVHQIRVAITRLRAAVAFFASIVVDAKWLRLRKEIAWLNGSLGAARDSDVVVEYARRKRYRAWGQRMIGKQLDESQTQDHRRLVRCLRSVRTQRLIVAMAAWIRQGPWLERHKRRE---DAEALQSYCARELNRWHERLVRKGRHLKTLGASRRHRLRIKAKHFRYMLEALTETVDFGGRNEWRHLHRPAKRLQRVLGDMRDLERFAGSAGGSPQAENIKRGRKHPPGYRRQREKLLSAAIAAHRDLKHAGAC 300          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: A0A1M7AXZ2_9BRAD (CHAD domain-containing protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1M7AXZ2_9BRAD)

HSP 1 Score: 340 bits (873), Expect = 5.270e-114
Identity = 180/301 (59.80%), Postives = 215/301 (71.43%), Query Frame = 1
Query:    1 MKGAGQTTLHVQRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            M  AG+     +RKA + A  DCATAF K+A DCVA V+ HH SACAGD E+VH+IRVA TRLRAAVSFFAPI VD EW RLK+E+ WLN SLGAARDSDV V YA R+RY+ WA   IG  LD R+ +DHRR+V  LRS R   +I+A++ W   G WL RW+   RR DA+PL+AYC RELNRWR+RLIR+GR L +LGA+ RH+LRI AKRFRYMLEALT +V +  R   R +H  A  LQR LGDLRDL RFA  G+S   D   K RPPGYRR+R+KL  AA  A+  L+ +G C
Sbjct:   18 MTQAGRARASGRRKAVAAAGLDCATAFSKMAQDCVAGVKAHHGSACAGDAEAVHRIRVAITRLRAAVSFFAPIAVDAEWLRLKREIAWLNVSLGAARDSDVMVAYARRRRYQAWAGRAIGADLDRRRTQDHRRLVSCLRSARARRLIEALAVWTRQGPWLARWEAVARRGDAEPLQAYCGRELNRWRERLIRQGRHLSSLGAARRHRLRIRAKRFRYMLEALTDIVAMRRRAEVRPMHDAAKRLQRTLGDLRDLRRFA--GLSPSADKRDKRRPPGYRRQREKLGNAAAQAWRDLKQAGAC 316          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: A0A7Z2SR06_9BRAD (CHAD domain-containing protein n=2 Tax=Bradyrhizobium sp. CCBAU 051011 TaxID=858422 RepID=A0A7Z2SR06_9BRAD)

HSP 1 Score: 339 bits (870), Expect = 1.070e-113
Identity = 179/290 (61.72%), Postives = 218/290 (75.17%), Query Frame = 1
Query:   34 QRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARR---GVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDS 894
            +RK A+ A  DCATAFQ +ALDCVA ++ HHSSACAGD E+VHQIR+A TRLRAAV+FFAPI VD EW RLKKE+ WLN SLGAARDSDV VEYA RKRYR WAQ MIG  LD RQ R+HR++VR+LRS+R   +I AM+GWI  G WL R    ++R DA+ L+ YC R+LNRW  RL+R+GR+L TLGAS RH+LRI+ KRFRYMLEALT  V ++ R   RH+H PA  LQRALGDLRD++ FA     G  A+   + K RPPGYRRR++KL  AA+A++  +  S
Sbjct:   10 RRKVAAAASLDCATAFQTMALDCVAAIKAHHSSACAGDAEAVHQIRIAITRLRAAVAFFAPIVVDEEWVRLKKEIAWLNGSLGAARDSDVLVEYARRKRYRAWAQRMIGEQLDQRQMRNHRQLVRALRSVRTQHLISAMAGWIRRGPWLARC---QQRKDAEALQIYCARKLNRWHGRLVRQGRQLNTLGASRRHRLRIKFKRFRYMLEALTETVNLWGRRELRHLHQPAKQLQRALGDLRDIKSFASLAGDGPQAKKGKTSKKRPPGYRRRKEKLLGAALASHRDMAKS 296          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI000D3D83CF (CHAD domain-containing protein n=1 Tax=Bradyrhizobium algeriense TaxID=634784 RepID=UPI000D3D83CF)

HSP 1 Score: 338 bits (866), Expect = 3.530e-113
Identity = 178/295 (60.34%), Postives = 215/295 (72.88%), Query Frame = 1
Query:   34 QRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSA-----EGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            +R+ A   + DCA AFQK+ LDCVA ++ HHSSACAGD E+VHQIRVA TRLRAAV+FFAPI  D EW RLKKE+ WLN  LGAARDSDV +EYA RKRYR W+Q MIG   D RQ R+HRR+VR LRS R   ++ AM+ WI  G WL R++R   R DA+ L++YC  ELNRWR RL+RKGR LKTLGAS RH+LRI+AK FRY+LEALT +V    RG F  +H PA  LQRALGD+RDLERFA  G+++     E    G+  PPGYR RR+K+  AA+AAY  L+ +G C
Sbjct:   11 RREGAEAVDLDCAAAFQKMTLDCVAAIKAHHSSACAGDAEAVHQIRVAITRLRAAVAFFAPIVADAEWLRLKKEIAWLNGPLGAARDSDVVMEYARRKRYRAWSQHMIGEQPDQRQVRNHRRLVRCLRSARTQRLVAAMARWIRQGAWLERYRR---RQDAEALQSYCAGELNRWRARLVRKGRHLKTLGASRRHRLRIKAKHFRYILEALTEIVAPRGRGEFHGLHRPAKRLQRALGDMRDLERFA--GLASGSPQVENGKRGRKYPPGYRNRREKMFDAAIAAYRDLKHAGAC 300          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: A0A1H0KJP1_9BRAD (CHAD domain-containing protein n=1 Tax=Afipia sp. GAS231 TaxID=1882747 RepID=A0A1H0KJP1_9BRAD)

HSP 1 Score: 337 bits (864), Expect = 6.640e-113
Identity = 177/290 (61.03%), Postives = 207/290 (71.38%), Query Frame = 1
Query:   34 QRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGGC 903
            +RKA + A  DCAT FQKIA DCVA ++ HH SACAGD E+VH IRVA TRLRA VSFFAPI  D EW RLK+E+ WLN SLGAARDSDV VEYA R+RYR WA  +IG  LD R+ +DHRR+VR LRS R   +I A++ W   G WL RW+   RR DA+PL+AYC RELNRWR+RLIRKG+ L +L  + RH LRI AKRFRYMLEALT +V +  R   RH+H  A  LQR LGDLRDL RFAR   SA   D    RPPGYRR+R+KL  AA  A+  L+ +G C
Sbjct:   12 RRKAVAVARPDCATVFQKIAQDCVASIKAHHGSACAGDAEAVHLIRVAITRLRATVSFFAPIAADAEWLRLKQEIAWLNVSLGAARDSDVMVEYARRRRYRAWAGRVIGADLDRRRTQDHRRLVRCLRSARARRLIDALAVWTRQGPWLARWEAAARRGDAEPLQAYCGRELNRWRERLIRKGKDLASLNTARRHHLRIRAKRFRYMLEALTDIVAMRSRAELRHMHRAAKRLQRTLGDLRDLRRFARLSPSA---DKRAKRPPGYRRQREKLGNAAAGAWRDLKQAGAC 298          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: UPI001FF9408C (CHAD domain-containing protein n=1 Tax=Bradyrhizobium sp. 190 TaxID=2782658 RepID=UPI001FF9408C)

HSP 1 Score: 333 bits (855), Expect = 1.650e-111
Identity = 175/290 (60.34%), Postives = 216/290 (74.48%), Query Frame = 1
Query:   34 QRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFARRGVSA-----EGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLR 888
            +RKAA  A  DCATAFQK+AL CVA ++ HHSSACAGD E+VHQ+RVA TRLRAAVSFFAPI VD EWRRLK+E+ WLN  LGAARD DV VE+A R++YR W Q M+G   D RQ RDHRR+VR LRS R   ++ AM+ WI  G WL R++R   R  A+ L++YC  EL+RW +RL+RKG+ LK+LGAS RH+LRI+AKRFRYMLEALT  V ++ RG F H+H PA  +QRALGD+RDLERFA  G+++     E    GK  PPGYR R++KL  AA+AA+  L+
Sbjct:   11 RRKAAEAAGLDCATAFQKMALGCVAAIKAHHSSACAGDAEAVHQVRVAITRLRAAVSFFAPIVVDAEWRRLKQEIAWLNGPLGAARDIDVVVEHARRRQYRAWMQDMVGEQFDQRQMRDHRRLVRCLRSARTQRLVAAMAAWIRQGPWLPRYRR---RKHAEALQSYCAGELDRWHERLVRKGKSLKSLGASRRHRLRIKAKRFRYMLEALTETVALWGRGKFHHLHRPAKRMQRALGDMRDLERFA--GLASGSPQVENGKRGKKHPPGYRHRKEKLLGAAIAAHHDLK 295          
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Match: A0A1B1UHA5_9BRAD (CHAD domain-containing protein n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A1B1UHA5_9BRAD)

HSP 1 Score: 333 bits (853), Expect = 3.210e-111
Identity = 176/286 (61.54%), Postives = 207/286 (72.38%), Query Frame = 1
Query:   49 STAEFDCATAFQKIALDCVAMVRLHHSSACAGDTESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSDVAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAMSGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTLGASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGDLRDLERFA---RRGVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSG 897
            S A  DCATAFQ IALDC+A ++ HHSSACAGD E+VHQIRVA TRLRAAV+FFAPI VD EW RLKKE+ WLN  LGAARDSDV +EYA RKRYR WA  M+G  LD  Q RDHR +VRSLRS R   ++ A++ WI  G WL R++R   R +A+ L++YC RELNRW +RL+RKGR+LKTLGAS RH+LRI+ KRFRYMLEALT +V    RG   H+H PA  LQRALGDLRDL+RFA        AE    G+  PPGYR R+ KL  AA+ A+  L   G
Sbjct:   15 SAAGLDCATAFQTIALDCIASIKAHHSSACAGDAEAVHQIRVAITRLRAAVAFFAPIVVDAEWLRLKKEIAWLNGPLGAARDSDVVMEYARRKRYRAWADRMVGEQLDQHQTRDHRHLVRSLRSARTQRLVAAIARWIRQGAWLERYRR---RKNAETLQSYCMRELNRWHERLVRKGRQLKTLGASRRHRLRIKVKRFRYMLEALTEIVAPDGRGELHHLHKPAKRLQRALGDLRDLKRFAGLANGSPQAENGKRGRKLPPGYRPRKAKLLGAAITAHRDLEHIG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20820.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001BA902C61.750e-15173.75CHAD domain-containing protein n=7 Tax=Bradyrhizob... [more]
UPI00200056E57.370e-12061.59CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]
UPI001FFF2F9C2.290e-11661.33CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]
UPI001BA8B7974.610e-11662.80CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]
A0A1M7AXZ2_9BRAD5.270e-11459.80CHAD domain-containing protein n=2 Tax=Bradyrhizob... [more]
A0A7Z2SR06_9BRAD1.070e-11361.72CHAD domain-containing protein n=2 Tax=Bradyrhizob... [more]
UPI000D3D83CF3.530e-11360.34CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]
A0A1H0KJP1_9BRAD6.640e-11361.03CHAD domain-containing protein n=1 Tax=Afipia sp. ... [more]
UPI001FF9408C1.650e-11160.34CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]
A0A1B1UHA5_9BRAD3.210e-11161.54CHAD domain-containing protein n=1 Tax=Bradyrhizob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20820contigP-wetherbeei_contig20820:243..1148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1038859.AXAU01000001_gene3235
PFAMsCHAD
Model size906
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.25e-105
EggNOG OGsCOG5607@1|root,COG5607@2|Bacteria,1R678@1224|Proteobacteria,2TTJQ@28211|Alphaproteobacteria,3JRFF@41294|Bradyrhizobiaceae
DescriptionCHAD
Cds size906
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186209.4776545-CDS-P-wetherbeei_contig20820:242..11481683186209.4776545-CDS-P-wetherbeei_contig20820:242..1148Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20820 243..1148 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20820.1.1prot_P-wetherbeei_contig20820.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20820 243..1148 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20820.1.1

>prot_P-wetherbeei_contig20820.1.1 ID=prot_P-wetherbeei_contig20820.1.1|Name=mRNA_P-wetherbeei_contig20820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MKGAGQTTLHVQRKAASTAEFDCATAFQKIALDCVAMVRLHHSSACAGDT
ESVHQIRVAFTRLRAAVSFFAPITVDREWRRLKKELKWLNTSLGAARDSD
VAVEYAGRKRYRVWAQCMIGRHLDARQARDHRRMVRSLRSLRLHDIIQAM
SGWIEAGRWLRRWKRNERRNDAKPLRAYCERELNRWRKRLIRKGRRLKTL
GASDRHQLRIEAKRFRYMLEALTGVVPVFDRGAFRHVHGPATGLQRALGD
LRDLERFARRGVSAEGDDSGKHRPPGYRRRRKKLRRAAMAAYVSLRDSGG
C*
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mRNA from alignment at P-wetherbeei_contig20820:243..1148+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20820.1.1 ID=mRNA_P-wetherbeei_contig20820.1.1|Name=mRNA_P-wetherbeei_contig20820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig20820:243..1148+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGGCGCTGGCCAGACCACATTGCACGTTCAGCGGAAGGCTGCTTC GACGGCAGAGTTCGATTGCGCGACGGCATTCCAGAAAATTGCGCTGGATT GCGTCGCCATGGTCAGGCTGCATCACAGCAGTGCCTGCGCCGGCGATACC GAATCCGTGCATCAGATACGCGTCGCTTTTACCCGGCTGCGGGCCGCCGT GTCCTTCTTCGCTCCGATCACGGTTGACCGTGAATGGCGACGCCTGAAGA AGGAACTCAAATGGCTGAACACCTCGCTCGGCGCCGCGCGCGACAGCGAT GTGGCGGTGGAATATGCGGGCCGCAAACGCTACCGGGTCTGGGCGCAATG CATGATCGGCAGGCATCTCGATGCGCGTCAGGCGCGCGATCATCGCCGGA TGGTCCGCAGCCTGCGTTCCCTGCGGCTTCATGATATTATCCAGGCGATG TCGGGCTGGATCGAGGCTGGCCGATGGCTCCGGCGTTGGAAGCGCAACGA GCGCCGCAACGACGCAAAGCCGCTGCGGGCTTATTGCGAACGCGAGCTCA ATCGCTGGCGCAAGCGGCTGATCCGGAAAGGGCGACGGCTCAAAACCCTC GGCGCATCCGATCGTCACCAGCTGCGAATCGAGGCGAAACGCTTTCGCTA CATGCTGGAGGCGCTGACGGGCGTCGTTCCGGTGTTCGACCGAGGCGCAT TCCGTCACGTCCACGGTCCCGCAACAGGGCTGCAACGCGCCCTGGGCGAT CTTCGCGATCTCGAGCGGTTCGCGAGGCGCGGAGTGTCGGCTGAAGGCGA TGATTCAGGCAAACACCGGCCACCGGGCTATCGCCGGCGAAGGAAAAAAC TGCGGCGCGCGGCGATGGCAGCCTATGTCAGCCTCAGGGACTCCGGCGGA TGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20820:243..1148+

>mRNA_P-wetherbeei_contig20820.1.1 ID=mRNA_P-wetherbeei_contig20820.1.1|Name=mRNA_P-wetherbeei_contig20820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig20820:243..1148+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGGCGCTGGCCAGACCACATTGCACGTTCAGCGGAAGGCTGCTTC
GACGGCAGAGTTCGATTGCGCGACGGCATTCCAGAAAATTGCGCTGGATT
GCGTCGCCATGGTCAGGCTGCATCACAGCAGTGCCTGCGCCGGCGATACC
GAATCCGTGCATCAGATACGCGTCGCTTTTACCCGGCTGCGGGCCGCCGT
GTCCTTCTTCGCTCCGATCACGGTTGACCGTGAATGGCGACGCCTGAAGA
AGGAACTCAAATGGCTGAACACCTCGCTCGGCGCCGCGCGCGACAGCGAT
GTGGCGGTGGAATATGCGGGCCGCAAACGCTACCGGGTCTGGGCGCAATG
CATGATCGGCAGGCATCTCGATGCGCGTCAGGCGCGCGATCATCGCCGGA
TGGTCCGCAGCCTGCGTTCCCTGCGGCTTCATGATATTATCCAGGCGATG
TCGGGCTGGATCGAGGCTGGCCGATGGCTCCGGCGTTGGAAGCGCAACGA
GCGCCGCAACGACGCAAAGCCGCTGCGGGCTTATTGCGAACGCGAGCTCA
ATCGCTGGCGCAAGCGGCTGATCCGGAAAGGGCGACGGCTCAAAACCCTC
GGCGCATCCGATCGTCACCAGCTGCGAATCGAGGCGAAACGCTTTCGCTA
CATGCTGGAGGCGCTGACGGGCGTCGTTCCGGTGTTCGACCGAGGCGCAT
TCCGTCACGTCCACGGTCCCGCAACAGGGCTGCAACGCGCCCTGGGCGAT
CTTCGCGATCTCGAGCGGTTCGCGAGGCGCGGAGTGTCGGCTGAAGGCGA
TGATTCAGGCAAACACCGGCCACCGGGCTATCGCCGGCGAAGGAAAAAAC
TGCGGCGCGCGGCGATGGCAGCCTATGTCAGCCTCAGGGACTCCGGCGGA
TGCTGA
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