mRNA_P-wetherbeei_contig20812.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20812.1.1
Unique NamemRNA_P-wetherbeei_contig20812.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: UPI0009B46650 (protein-L-isoaspartate(D-aspartate) O-methyltransferase-like n=1 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B46650)

HSP 1 Score: 81.6 bits (200), Expect = 1.670e-18
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVPIQVR 198
            R+ G+E+I  L ++S +NV+ DDP LLSSGRI    G+G  G PD AP+DAIHVGAAAA+VP  VR
Sbjct:   42 RVVGIEHINELVQMSIKNVQADDPELLSSGRIRFVVGDGRLGFPDGAPYDAIHVGAAAATVPRAVR 107
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A8C5GK96_9TELE (Protein-L-isoaspartate O-methyltransferase n=3 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5GK96_9TELE)

HSP 1 Score: 82.0 bits (201), Expect = 1.990e-17
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L E+S RNV+ DDP LLSSGRI+L  G+G  G P  AP+DAIHVGAAAASVP
Sbjct:  127 RVVGIEHINELVEMSIRNVQADDPELLSSGRIKLIVGDGRLGYPQGAPYDAIHVGAAAASVP 188
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: D7FPW4_ECTSI (Protein-L-isoaspartate (D-aspartate) O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.780e-17
Identity = 34/64 (53.12%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    4 IFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVPIQV 195
            ++G++YI  L ELSR N+++DD ++LSSGR+ L T +GW G P+  P+DAIHVGAAA S+P+ +
Sbjct:  209 VYGLDYIQQLVELSRTNLDKDDSTMLSSGRVVLKTADGWRGWPENGPYDAIHVGAAAESIPMDL 272
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A669D5I7_ORENI (Protein-L-isoaspartate O-methyltransferase n=57 Tax=Percomorphaceae TaxID=1489872 RepID=A0A669D5I7_ORENI)

HSP 1 Score: 80.9 bits (198), Expect = 4.450e-17
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L ++S +NV+ DDP LLSSGRI+L  G+G  G PD AP+DAIHVGAAAA+VP
Sbjct:  126 RVVGIEHIDELVQMSIKNVQADDPELLSSGRIKLVVGDGRLGYPDGAPYDAIHVGAAAATVP 187
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A669BQP2_ORENI (Protein-L-isoaspartate O-methyltransferase n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669BQP2_ORENI)

HSP 1 Score: 80.9 bits (198), Expect = 4.520e-17
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L ++S +NV+ DDP LLSSGRI+L  G+G  G PD AP+DAIHVGAAAA+VP
Sbjct:  127 RVVGIEHIDELVQMSIKNVQADDPELLSSGRIKLVVGDGRLGYPDGAPYDAIHVGAAAATVP 188
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A3Q4H917_NEOBR (Protein-L-isoaspartate O-methyltransferase n=22 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q4H917_NEOBR)

HSP 1 Score: 80.9 bits (198), Expect = 5.140e-17
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L ++S +NV+ DDP LLSSGRI+L  G+G  G PD AP+DAIHVGAAAA+VP
Sbjct:  126 RVVGIEHIDELVQMSIKNVQADDPELLSSGRIKLVVGDGRLGYPDGAPYDAIHVGAAAATVP 187
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: H3DIX2_TETNG (Protein-L-isoaspartate O-methyltransferase n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3DIX2_TETNG)

HSP 1 Score: 80.5 bits (197), Expect = 5.360e-17
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L E+S +NV+ DDP LL+SGRI+L  G+G  G P+ AP+DAIHVGAAAA+VP
Sbjct:  105 RVVGIEHINQLVEMSLKNVQADDPELLTSGRIKLVVGDGRLGFPEGAPYDAIHVGAAAAAVP 166
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A7L3AY36_9AVES (PIMT methyltransferase (Fragment) n=1 Tax=Syrrhaptes paradoxus TaxID=302527 RepID=A0A7L3AY36_9AVES)

HSP 1 Score: 78.2 bits (191), Expect = 5.520e-17
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 1 
Query:   10 GMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            G+E+I  L   S RNV+ DDP+LLSSGR++L  G+G  G P++AP+DAIHVGAAAA+VP
Sbjct:   15 GVEHIKELVHESIRNVQEDDPTLLSSGRVKLVVGDGRQGYPEEAPYDAIHVGAAAATVP 73
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BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A8C8AGC3_9STRI (Protein-L-isoaspartate O-methyltransferase n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8AGC3_9STRI)

HSP 1 Score: 80.1 bits (196), Expect = 5.550e-17
Identity = 37/63 (58.73%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:   10 GMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVPIQVR 198
            G+E+I  L   S +NV+ DDP+LLSSGR++L  G+G  G P++AP+DAIHVGAAAA+VP +VR
Sbjct:  128 GVEHIKELVHESIKNVQEDDPALLSSGRVKLVVGDGRQGYPEEAPYDAIHVGAAAATVPKEVR 190
[Close]
BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Match: A0A6P7HHF4_9TELE (Protein-L-isoaspartate O-methyltransferase n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6P7HHF4_9TELE)

HSP 1 Score: 80.5 bits (197), Expect = 7.560e-17
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 
Query:    1 RIFGMEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHVGAAAASVP 186
            R+ G+E+I  L +LS +NV+ DDP LLSSGR+ L  G+G  G PD AP+DAIHVGAAAA+VP
Sbjct:  126 RVVGIEHIDELVQLSIKNVQADDPELLSSGRVTLVVGDGRLGYPDGAPYDAIHVGAAAATVP 187
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20812.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0009B466501.670e-1859.09protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
A0A8C5GK96_9TELE1.990e-1764.52Protein-L-isoaspartate O-methyltransferase n=3 Tax... [more]
D7FPW4_ECTSI2.780e-1753.13Protein-L-isoaspartate (D-aspartate) O-methyltrans... [more]
A0A669D5I7_ORENI4.450e-1761.29Protein-L-isoaspartate O-methyltransferase n=57 Ta... [more]
A0A669BQP2_ORENI4.520e-1761.29Protein-L-isoaspartate O-methyltransferase n=1 Tax... [more]
A0A3Q4H917_NEOBR5.140e-1761.29Protein-L-isoaspartate O-methyltransferase n=22 Ta... [more]
H3DIX2_TETNG5.360e-1759.68Protein-L-isoaspartate O-methyltransferase n=2 Tax... [more]
A0A7L3AY36_9AVES5.520e-1761.02PIMT methyltransferase (Fragment) n=1 Tax=Syrrhapt... [more]
A0A8C8AGC3_9STRI5.550e-1758.73Protein-L-isoaspartate O-methyltransferase n=1 Tax... [more]
A0A6P7HHF4_9TELE7.560e-1761.29Protein-L-isoaspartate O-methyltransferase n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20812contigP-wetherbeei_contig20812:806..1003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FPW4
Preferred namePCMT1
PFAMsPCMT
Model size198
Max annot lvl2759|Eukaryota
KEGG koko:K00573
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005903,GO:0006082,GO:0006139,GO:0006464,GO:0006479,GO:0006520,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006970,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009116,GO:0009119,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009791,GO:0009845,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010340,GO:0010506,GO:0010656,GO:0010660,GO:0010662,GO:0010664,GO:0010665,GO:0010667,GO:0010941,GO:0016020,GO:0016323,GO:0016740,GO:0016741,GO:0017144,GO:0018193,GO:0018197,GO:0019222,GO:0019538,GO:0019752,GO:0030091,GO:0030424,GO:0031253,GO:0031323,GO:0031329,GO:0031526,GO:0031667,GO:0032259,GO:0032501,GO:0032502,GO:0033554,GO:0033555,GO:0033993,GO:0034641,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0042221,GO:0042278,GO:0042493,GO:0042594,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043204,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044297,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044463,GO:0044464,GO:0045471,GO:0046128,GO:0046483,GO:0046498,GO:0046500,GO:0046677,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051704,GO:0051707,GO:0051716,GO:0051998,GO:0055086,GO:0060548,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071944,GO:0072521,GO:0090351,GO:0097305,GO:0097458,GO:0098542,GO:0098590,GO:0098862,GO:0120025,GO:0120038,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657,GO:1901700
Exons1
Evalue1.43e-16
EggNOG OGsCOG2518@1|root,KOG1661@2759|Eukaryota
EC2.1.1.77
Descriptionprotein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Cds size186
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186209.300386-CDS-P-wetherbeei_contig20812:805..9911683186209.300386-CDS-P-wetherbeei_contig20812:805..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20812 806..991 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186209.3120167-UTR-P-wetherbeei_contig20812:991..10031683186209.3120167-UTR-P-wetherbeei_contig20812:991..1003Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20812 992..1003 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20812.1.1prot_P-wetherbeei_contig20812.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20812 806..991 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20812.1.1

>prot_P-wetherbeei_contig20812.1.1 ID=prot_P-wetherbeei_contig20812.1.1|Name=mRNA_P-wetherbeei_contig20812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp
MEYIGALTELSRRNVERDDPSLLSSGRIELATGNGWDGLPDKAPFDAIHV
GAAAASVPIQVR
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mRNA from alignment at P-wetherbeei_contig20812:806..1003-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20812.1.1 ID=mRNA_P-wetherbeei_contig20812.1.1|Name=mRNA_P-wetherbeei_contig20812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig20812:806..1003- (Phaeothamnion wetherbeei SAG_119_79)
AGGATCTTCGGGATGGAGTACATCGGCGCACTGACGGAGCTGAGCCGCCG
CAACGTCGAGCGGGACGACCCGTCGCTGCTGAGCTCGGGGCGCATCGAGC
TGGCGACCGGCAACGGCTGGGATGGACTTCCCGACAAGGCGCCCTTCGAC
GCAATTCACGTCGGCGCCGCGGCCGCCAGTGTCCCCATACAGGTGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20812:806..1003-

>mRNA_P-wetherbeei_contig20812.1.1 ID=mRNA_P-wetherbeei_contig20812.1.1|Name=mRNA_P-wetherbeei_contig20812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig20812:806..1003- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGTACATCGGCGCACTGACGGAGCTGAGCCGCCGCAACGTCGAGCG
GGACGACCCGTCGCTGCTGAGCTCGGGGCGCATCGAGCTGGCGACCGGCA
ACGGCTGGGATGGACTTCCCGACAAGGCGCCCTTCGACGCAATTCACGTC
GGCGCCGCGGCCGCCAGTGTCCCCATACAGGTGAGG
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