mRNA_P-wetherbeei_contig20804.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A3D6EVH3_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D6EVH3_9BACT) HSP 1 Score: 248 bits (634), Expect = 1.800e-77 Identity = 132/201 (65.67%), Postives = 159/201 (79.10%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTY-GPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
MK+ Y++ + + GV Q TLQ+CIDYALEN+V +QNA LD+ IA++KVKET+GIGLPQISG+AS++HN KLPRFF TY GP GFI F IP GI+ GDV+AAENFFQLKSSGD +SVNQ+IFNGSYIVGL+ASK YKELSY+AT QSKEQI++QVTKAYY VLINKER+ LFTSNI R+D+L +N
Sbjct: 1 MKQFYKVFVLLIGLAATPGV-----QAQTTFTLQQCIDYALENSVQVQNAILDEEIAQAKVKETIGIGLPQISGSASLMHNNKLPRFFNTYTGPGGFIDFGG--IP-GIQPGDVVAAENFFQLKSSGDASVSVNQLIFNGSYIVGLRASKTYKELSYKATAQSKEQIVQQVTKAYYTVLINKERVTLFTSNIARVDSLHKN 193
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A136M680_9BACT (Outer membrane efflux protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A136M680_9BACT) HSP 1 Score: 242 bits (618), Expect = 4.260e-75 Identity = 127/201 (63.18%), Postives = 162/201 (80.60%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTY-GPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
MK+ Y+I+I + + L + Q TLQ+CI YALEN+V +QNA+LD++IA+++V ET+GIGLPQIS +A+ +HN KLPRFF TY GP GF F + IP GI+ GDV+AAENFFQLKSSGD+ +SVNQ+IF+GSYIVGL+ASK YKELSY+AT+QSKEQI++QVTKAYY VLINKERI LF+SNI R+D+LL+N
Sbjct: 1 MKQFYKILI-LLIGLAAAPAVYAQT----AFTLQQCIQYALENSVQVQNARLDEAIAQARVHETIGIGLPQISASATAMHNNKLPRFFNTYNGPGGFFDFSS--IP-GIQVGDVVAAENFFQLKSSGDMNVSVNQLIFSGSYIVGLKASKTYKELSYKATDQSKEQIVQQVTKAYYTVLINKERITLFSSNIARVDSLLKN 193
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A6N4EJL2_9RHOO (TolC family protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EJL2_9RHOO) HSP 1 Score: 229 bits (583), Expect = 8.540e-70 Identity = 121/201 (60.20%), Postives = 153/201 (76.12%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTY-GPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
MKR ++ I +AL T A+ Q + TL++CI YALEN++ +NA L+Q IA++KV ETVGIGLPQISG+ASVVHN+KL RFFTT+ GPDGFI +P GI+ GDV+AA+NFFQLKSSG + +NQI+FNGSY+VGL+ASK Y ELS R+ Q+ + II+QVTKAYY+VLINKER LFT NI R+D+LLRN
Sbjct: 1 MKR----VLTILMALIFTSAAWAQQAESSSFTLEQCIQYALENSIAAKNADLEQRIAKAKVNETVGIGLPQISGSASVVHNQKLQRFFTTFTGPDGFIDLSG--VP-GIQVGDVVAAQNFFQLKSSGSASVGINQILFNGSYLVGLKASKTYTELSQRSAEQTDQDIIQQVTKAYYSVLINKERTKLFTDNIARVDSLLRN 194
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A401UEU3_9BACT (TolC family protein n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UEU3_9BACT) HSP 1 Score: 226 bits (577), Expect = 5.950e-69 Identity = 113/176 (64.20%), Postives = 145/176 (82.39%), Query Frame = 1
Query: 76 QPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTYGPDG-FIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
Q + TL++ + YALENA+ QNA LD+ IAE+KVKET+G+GLPQI+G AS+VHN+KLPRFFTTY P G FI +P GI+ GDV+ A+NFFQLKS GDVG+++NQ+IFNGSY+VGLQAS AYKEL+Y+ T Q++E+II+QV+KA+Y VLIN+ER+DLF +NI RLDTLL N
Sbjct: 22 QASSSFTLEQALAYALENAIDKQNATLDERIAEAKVKETIGLGLPQINGNASIVHNQKLPRFFTTYDPSGGFIDLSG--VP-GIQPGDVVGAQNFFQLKSGGDVGVNINQLIFNGSYLVGLQASNAYKELAYKTTAQTEEKIIQQVSKAFYTVLINRERLDLFDNNIARLDTLLSN 194
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A5E7Z9Z0_9BACT (Outer membrane efflux protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E7Z9Z0_9BACT) HSP 1 Score: 215 bits (547), Expect = 2.200e-64 Identity = 112/172 (65.12%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 91 LTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTYG--PDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
L+L++CIDYAL N++ QNA LD+ IA +KVKET+GIGLPQISG+ASV HN+KL RF+ TY P+ F FPA IP G + GDV+AA NFFQLKSSG+ ++VNQ+IFNGSYIVGLQAS YKELS + + Q++EQI+EQVTKAYY VLIN+ER+ LF +NI R+D+LLRN
Sbjct: 36 LSLEQCIDYALANSINAQNATLDEQIATAKVKETIGIGLPQISGSASVNHNQKLQRFYGTYNDDPNAFSFFPAG-IP-GAQNGDVLAAPNFFQLKSSGNASVTVNQMIFNGSYIVGLQASNTYKELSQKTSEQTREQIVEQVTKAYYAVLINRERMLLFDANIARVDSLLRN 205
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A3B8W3C9_9BACT (TolC family protein (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8W3C9_9BACT) HSP 1 Score: 210 bits (535), Expect = 1.020e-62 Identity = 114/201 (56.72%), Postives = 152/201 (75.62%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTY-GPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
MKR + + +++ L TG A Q P+ L++CI YAL+NA+ QNA LD+ IA +KVKET+G GLPQI+ +ASV +NE+L RFFTTY GP GFI +P GI+ GDV++A+NFFQLK +G+VGL+++Q+IFNGSY+VGLQA+ AYK L+ + Q++E I+E VTKAYY VLIN+ERIDLF SNI R+D+LLRN
Sbjct: 1 MKRTF---LALSLVLLFTG-ARSQSGPS-AFGLEQCIQYALDNAINSQNAALDEQIASAKVKETIGTGLPQINASASVQYNEQLRRFFTTYTGPGGFIDLSG--VP-GIQVGDVVSAQNFFQLKGAGEVGLNIDQMIFNGSYLVGLQAANAYKTLATKQAIQTREAIVENVTKAYYAVLINRERIDLFNSNIARVDSLLRN 193
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A7Y4V9P8_9BACT (TolC family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4V9P8_9BACT) HSP 1 Score: 208 bits (529), Expect = 6.140e-62 Identity = 104/179 (58.10%), Postives = 136/179 (75.98%), Query Frame = 1
Query: 70 QDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTYGPDGFIQFPAD--QIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
Q Q TL++CI+YAL N+V QNA +DQ IA +KVKET G+GLPQI S+VHN KL RFFTTY P F D +P GI+ GDV+AA+NFFQLK+SG +S+NQ++F+GSY+VGL+ASKAYK LS++A + ++EQI++QVTKAYY +LIN+ER LF ++I RLD+LLRN
Sbjct: 1 QQQIGTTFTLEQCIEYALTNSVNAQNAIIDQEIASAKVKETTGLGLPQIDAGVSLVHNAKLQRFFTTYNPSSGANFLGDLSTVP-GIQAGDVVAAQNFFQLKNSGSASISINQLLFSGSYLVGLKASKAYKALSFKAADVTREQIVQQVTKAYYLILINRERTALFVNSIARLDSLLRN 178
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: UPI0019D8E9F0 (Transporter n=1 Tax=Cytophagales bacterium WSM2-2 TaxID=2774202 RepID=UPI0019D8E9F0) HSP 1 Score: 203 bits (517), Expect = 1.110e-59 Identity = 107/205 (52.20%), Postives = 149/205 (72.68%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFF-TTYGPDGFIQFPA----DQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
M R Y+ + IA+ + Q+Q A+ TL++CI+YAL+N+V +QN +D+ IA+S++KET+GIGLPQISGT + +N +LPRFF T GF + D +P +K+ DV+AA+NFFQLK+S + +SVNQ+IFNGSY+VGL+AS YKEL+ ++T Q+KEQ IE VTKAYY LINKERI+LF +NI R+D+LL+N
Sbjct: 26 MNRFYKTPLLIALIAVASAANAQQEQRAQTFTLEQCIEYALKNSVNMQNILIDEQIADSRIKETIGIGLPQISGTVNATNNPQLPRFFGTKQRMAGFAGVDSAHYGDFLP-NLKDNDVVAAQNFFQLKNSLNASISVNQLIFNGSYLVGLKASSVYKELAQKSTRQTKEQTIEMVTKAYYGALINKERINLFQNNIARVDSLLKN 229
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A2W4PG81_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4PG81_9BACT) HSP 1 Score: 202 bits (514), Expect = 1.690e-59 Identity = 100/167 (59.88%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 97 LQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTYGPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLR 597
L +CI YALEN V +QNA++D+ IA+++VKETVGIGLPQI G+ ++ HNEKLPRFF Y P+ F IP GI+ GDV+A NFFQL SSGD G+ VNQ+IFN SY+VGL+A+ YKEL+++ T Q++ Q+IE V KAYY VLIN ERI LF +NI R+D+LLR
Sbjct: 29 LDDCIRYALENTVEVQNARIDEQIAKARVKETVGIGLPQIDGSVNITHNEKLPRFFMQYDPEQIGFFDPGDIP-GIEAGDVVAFGNFFQLPSSGDAGIHVNQLIFNASYLVGLKAADTYKELAFKTTTQTQIQVIENVQKAYYAVLINNERIALFDNNIARVDSLLR 194
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Match: A0A7Y4QYC6_9BACT (TolC family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4QYC6_9BACT) HSP 1 Score: 201 bits (510), Expect = 7.540e-59 Identity = 105/206 (50.97%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 1 MKRLYQIIIGIAVALTITGVAFGQDQPA-----RVLTLQECIDYALENAVTIQNAKLDQSIAESKVKETVGIGLPQISGTASVVHNEKLPRFFTTY-GPDGFIQFPADQIPAGIKEGDVIAAENFFQLKSSGDVGLSVNQIIFNGSYIVGLQASKAYKELSYRATNQSKEQIIEQVTKAYYNVLINKERIDLFTSNIGRLDTLLRN 600
M Y++II +A L + + Q +P + TL +CI+YAL+NA+ +QNA LDQ IA +KVKETVG+GLP ISG +VHN +L RFFTTY G GF+ +P IK GDV+AA+NFFQLK+SG ++ NQ++F+GSY+VGLQAS+A+K+LSY++ NQ++E++I+ V KAYY++LI+KER+ LF +N+ R+ LL N
Sbjct: 1 MSPFYKLIIFLAATLLVRA-GYAQQEPTSPSAPQAFTLDQCIEYALKNAIAMQNATLDQQIAAAKVKETVGLGLPDISGNVQLVHNTQLQRFFTTYTGTTGFLG-DLSGVP-NIKVGDVVAAQNFFQLKNSGTASVTANQLLFSGSYLVGLQASQAFKDLSYKSANQTREEVIQAVKKAYYSLLISKERLLLFEANMTRVQALLNN 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20804.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20804.2.1 >prot_P-wetherbeei_contig20804.2.1 ID=prot_P-wetherbeei_contig20804.2.1|Name=mRNA_P-wetherbeei_contig20804.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp MKRLYQIIIGIAVALTITGVAFGQDQPARVLTLQECIDYALENAVTIQNAback to top mRNA from alignment at P-wetherbeei_contig20804:604..1203+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20804.2.1 ID=mRNA_P-wetherbeei_contig20804.2.1|Name=mRNA_P-wetherbeei_contig20804.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig20804:604..1203+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20804:604..1203+ >mRNA_P-wetherbeei_contig20804.2.1 ID=mRNA_P-wetherbeei_contig20804.2.1|Name=mRNA_P-wetherbeei_contig20804.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig20804:604..1203+ (Phaeothamnion wetherbeei SAG_119_79)back to top |