mRNA_P-wetherbeei_contig20802.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: D7FJ20_ECTSI (Calmodulin-binding WW domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ20_ECTSI) HSP 1 Score: 137 bits (345), Expect = 2.730e-34 Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 1
Query: 13 PVAVFCRQCGDAFCKPCFDASHARGRRREHALIDATPIPMCGVCSYQHAARLCET---SSKPKGFFCDVCFFNAHPDIE-ANRRELQGVELCVSSSPAKKQATAFTADGAGGSGGAAHKSKALVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYY 513
PV C C D++C+ CF A H RG+RR H A I MC VC YQHA R+CET + +CDVCFFN HP ++ ++ E +E A A+ A G H+ LVV CV C+ YAARW CDDC +V+C C+A +H HG H E LPYY
Sbjct: 1046 PVRRMCTSCRDSYCEECFQALHGRGKRRAHV---APVIHMCCVCKYQHATRICETCTFKTSTTSAYCDVCFFNKHPGLDNLSKAEAAAIEE-GRGXXXXXXAKAWALTAARKQEGWNHRWTPLVVTCVECRRYAARWLCDDCEEVYCVGCYAFVHRHGTKVNHGAEKLPYY 1212
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: A0A6H5KGW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 9.940e-33 Identity = 74/183 (40.44%), Postives = 94/183 (51.37%), Query Frame = 1
Query: 13 PVAVFCRQCGDAFCKPCFDASHARGRRREHALIDATPIPMCGVCSYQHAARLCETSS---KPKGFFCDVCFFNAHPDIE-ANRRELQGVELCVSSSPAKKQATAFTADGAGGSG---------GAAHKSKA---LVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYY 513
PV C C D++C+ CF A H RG+RR H A I +C VC YQHA R+CET + +CDVCFFN HP ++ ++ E +E +G GG G AA K + LVV CV C+ YAARW CDDC +V+C C+A +H HG H E LPYY
Sbjct: 244 PVRRMCTSCRDSYCEECFQALHGRGKRRAHV---APVIHVCCVCKYQHATRICETCTFKVSTTSAYCDVCFFNKHPGLDNLSKAEAAAIE-----------------EGRGGGGVGRAKAWSLTAAKKQEGWTPLVVTCVECRRYAARWLCDDCEEVYCVGCYAFVHKHGTKVNHGAEKLPYY 406
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: F0WT96_9STRA (Uncharacterized protein AlNc14C247G9581 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WT96_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.320e-13 Identity = 50/166 (30.12%), Postives = 68/166 (40.96%), Query Frame = 1
Query: 22 VFCRQCGDAFCKPCFDASHARGRRREHALIDATPIPMCGVCSYQHAARLCETSSKPKGFFCDVCFFNAHPDIEANRRELQGVELCVSSSPAKKQATAFTADGAGGSGGAAHKSKALVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYYTV 519
V+C QC D CK CF H G R + +C C Q A R C + K FCD CF H +++ +G E + S K++ H + VV CV C +W+CDDC D++C+RC H HSV + Y V
Sbjct: 1085 VYCLQCEDVMCKACFRRDH--GTRIAFNHHQPKMLKLCCNCENQIATRECLICADGKTSFCDTCFCFLHTSLKSAH---EGAE---NRSDTKQK----------------HPFRGYVVMCVECGERTGQWKCDDCDDLYCKRCLTVSHGKLYRLDHSVHQVNYVAV 1226
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: A0A7S2W5Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Q8_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.810e-12 Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 352 HKSKALVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYYT 516
HK + LV+PCV CK AARWRCDDC DV+C++C+ +H G Q H + L +YT
Sbjct: 3 HKWEWLVMPCVECKELAARWRCDDCHDVYCKQCYGFIHLKGARQSHRAQALSWYT 57
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: A0A7S2NSB5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSB5_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.950e-10 Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 352 HKSKALVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYYT 516
HK L++ C C AA+WRC++C D++C RCF LH G+ H +PLPYYT
Sbjct: 63 HKFSYLMMQCSECSQCAAQWRCNNCDDIYCSRCFVKLHQRGHRIKHEGQPLPYYT 117
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Match: A0A7S1UFF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFF4_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 7.770e-9 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 367 LVVPCVSCKSYAARWRCDDCADVFCRRCFAALHAHGNSQLHSVEPLPYYT 516
LV+ C C YAARWRC +C ++FC +C + LH G+ H+ E LPYYT
Sbjct: 44 LVISCSECGFYAARWRCQECVEIFCTKCLSYLHNKGHRLNHTCEALPYYT 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20802.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20802.3.1 >prot_P-wetherbeei_contig20802.3.1 ID=prot_P-wetherbeei_contig20802.3.1|Name=mRNA_P-wetherbeei_contig20802.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp ALAAPVAVFCRQCGDAFCKPCFDASHARGRRREHALIDATPIPMCGVCSYback to top mRNA from alignment at P-wetherbeei_contig20802:26..661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20802.3.1 ID=mRNA_P-wetherbeei_contig20802.3.1|Name=mRNA_P-wetherbeei_contig20802.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig20802:26..661- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20802:26..661- >mRNA_P-wetherbeei_contig20802.3.1 ID=mRNA_P-wetherbeei_contig20802.3.1|Name=mRNA_P-wetherbeei_contig20802.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig20802:26..661- (Phaeothamnion wetherbeei SAG_119_79)back to top |