mRNA_P-wetherbeei_contig2080.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A7S0DAI4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DAI4_9EUKA) HSP 1 Score: 165 bits (418), Expect = 1.010e-48 Identity = 85/187 (45.45%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 1 MKAISFLFFVGVAAATSRPLP-LDKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKSCLT----DPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAA 546
M +F+F + A P P + K TARW++ T+G L+TTSVHL+G FGNV SFVDG S+G+PYFYVS+MD SQ+D+ ANP SFTV+E DP+DP CAKV +TGVM +T E ++A+FA H MK WP H W +++L+I +W++DF+GGA+ + + Y+ A
Sbjct: 1 MLFAAFMFLMAPPARADGPPPFILKEKTARWVVHNATYGVLSTTSVHLNGTAFGNVQSFVDG-DMSFSSGIPYFYVSEMDVSQEDIKANPKVSFTVSEVNVGYCAQQKWDPEDPRCAKVVLTGVMVTITGE-EADKFKNAMFARHPAMKYWPTSHSWEIKKLNITDIWMLDFFGGASILDLDAYYKA 185
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A7S0SS89_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS89_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.320e-47 Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 52 RPLPLDKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKSCLT----DPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFA 543
+P KA TARWL N WG L+T+S+HL+G +G SFVDG+S+ STG+ YFY SDMDTS +D +NP+ SF + AE+ T DP+DP CA+VT++G +VT+ +ELS A +AL+ H M WPV H W+V ++DI +WL+D YGGA+ + + EY+A
Sbjct: 31 KPFFWKKAETARWLAHINIWGVLSTSSLHLNGQAWGQSKSFVDGSSSN-STGILYFYDSDMDTSIEDTQSNPLVSFALTMAERGYCTVNQIDPEDPKCARVTISGEFIEVTNESELSFALNALYERHPAMVSWPVDHNWKVHKIDINEIWLIDIYGGASFVDIDEYYA 197
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: D5ABI9_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ABI9_PICSI) HSP 1 Score: 151 bits (382), Expect = 3.780e-43 Identity = 82/185 (44.32%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 7 AISFLFFVGVAAA---TSRPLPLDKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKSCL--TDPQDPTCAKVTMTGVMADVT--DPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYF 540
AI F F GVA S+P P D TARWL+ +N WG L+T S+ L+GAPFGNV SF DG ++ +G+PYFY++ +D + +D+L + CSFT++EA TDP++PTC+K+T+TG M + DP E A AL++ H EM WP H ++ +L I ++L+D++GG + VAEYF
Sbjct: 9 AILFAFHTGVAYGYELQSKPDPSDARATARWLVSQNLWGVLSTISIDLEGAPFGNVVSFSDGLP-DQGSGIPYFYLTLLDPTPRDVLKDSRCSFTISEAPLGTCGDTDPENPTCSKLTLTGKMKQINRNDP-EADFAAQALYSKHSEMTDWPKDHNFQYFKLVIEGIFLIDWFGGPKPLSVAEYF 191
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: UPI00193A889E (protein CREG1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A889E) HSP 1 Score: 150 bits (378), Expect = 1.920e-42 Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 49 SRPLPLDKAGTARWLIRKNTWGFLATTSV--HLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAE-KSCLT---DPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAAS 549
S P +KA TAR+L+ +W +ATTS + G PF NV SF DG E TG+PYFYV+D D S QD++ NP+ SFT++EAE + C DP+DP CA++T++G M +VT+ E A +LF H MK WP H + V +L+I +WL+D++GG + +P+ +YFAA+
Sbjct: 35 SPPPHQEKAKTARYLVHATSWAVVATTSTLKEIAGRPFSNVFSFCDG-PIENGTGIPYFYVTDFDVSMQDVMKNPIVSFTLSEAEIEYCGNQDFDPEDPRCARLTLSGKMVNVTNNEERDFALASLFKRHPVMKSWPTSHDFHVTKLEIDMIWLLDYFGGGSVVPLKDYFAAN 206
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A176W293_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W293_MARPO) HSP 1 Score: 149 bits (376), Expect = 4.190e-42 Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 52 RPLPLDKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAE-KSCLT-DPQDPTCAKVTMTGVMADVTDPAELSA-ARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAAS 549
RP P D ARWL+ ++WG L+T S+HL GAP+GN+ASF DG K+TG PYFY+S MD + D+ + CS +++EA +C + D +DPTCA++T++G M ++ E A ALF+ H EM VWP GH WRV +L I ++LVDFYGGA ++ V +Y+ A+
Sbjct: 34 RPKPDDAEAMARWLVAFSSWGVLSTLSIHLGGAPWGNIASFSDGPKG-KATGTPYFYLSRMDPTPVDIEQDARCSLSLSEAPIGTCGSRDVEDPTCARLTLSGKMVELAKGCEEGKFALKALFSKHPEMAVWPKGHDWRVYKLKIEDIFLVDFYGGAKEMSVEDYYNAA 201
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: W7TKK5_9STRA (Protein creg1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKK5_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.830e-41 Identity = 74/172 (43.02%), Postives = 108/172 (62.79%), Query Frame = 1
Query: 52 RPLPLDKAGTARWLIRKNTWGFLATTSV--HLDGAPFGNVASFVDGTSTE-----KSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKS---CLTDPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEY 537
RP+P A + RWL+ ++TWG L+T S + GAPFGN S VDG + STG+PYF+VS++D SQQD AN + S TV+EA S + DP+ P C ++T+TG + +V D E + A ALF H +M+ WP HGW+V+++ RH++++D +GG + V EY
Sbjct: 29 RPVPPQPAKSGRWLLHESTWGVLSTVSTLPGIAGAPFGNPQSLVDGPYRDGLFGDNSTGIPYFFVSELDVSQQDASANSLVSLTVSEAGVSSECAMLDPESPLCIRLTVTGDLVEVVDEEETAFAMQALFQRHPQMQTWPTDHGWKVKKIVPRHIFVLDMFGGVKPVSVDEY 200
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A388LLM8_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLM8_CHABU) HSP 1 Score: 145 bits (366), Expect = 1.740e-40 Identity = 80/176 (45.45%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 34 VAAATSRPLPLDKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKS---CL-TDPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAAS 549
+ + + RP A ARWLI + +WG L+TTS+HL+G FGN+ASF DG S STGVPYFY+++MD + QD+ A+P CS TV EA C D +DP C +V ++G +A V D E++ A DALF H EM+ WP H + +L + +++L+DF+G A V EYFAA+
Sbjct: 30 ILSRSRRPPRKQHARMARWLISQASWGTLSTTSLHLNGTAFGNIASFSDGPS-HNSTGVPYFYLTEMDFTLQDVKADPRCSLTVTEASLKYGHCRGIDVEDPVCVRVVLSGKLAKVGDE-EVTFAEDALFHKHPEMRWWPKAHNFSTYKLAVENIFLLDFFGPPAQPSVEEYFAAA 203
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A061SAI5_9CHLO (Protein creg1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAI5_9CHLO) HSP 1 Score: 145 bits (365), Expect = 2.260e-40 Identity = 80/189 (42.33%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 7 AISFLFFVGVAAATSRPLPLDK-------AGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAE--AEKSCLTDPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAA 546
A+ L V + A ++P K AG ARWL+ N+WG L+TTS HL+G FGNV SF DG TG P+FY+S +D S QD+ +P CS TV++ K C DP+DPTCAK+T++G M V AR A+F H EM WP H + L++ V+L+D YGGA + VA +A
Sbjct: 15 ALISLILVVASMARAQPFDFTKLKLAQSDAGIARWLVASNSWGVLSTTSQHLNGTAFGNVVSFSDGVPPNH-TGTPFFYLSPLDPSLQDIRVHPWCSLTVSQLTTRKRCRVDPEDPTCAKLTLSGKMXPVAAGGAADGARAAVFGRHPEMASWPESHRFEFHXLEVEAVFLLDAYGGARALTVATITSA 202
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: UPI0019394946 (protein CREG1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019394946) HSP 1 Score: 144 bits (364), Expect = 2.480e-40 Identity = 74/173 (42.77%), Postives = 109/173 (63.01%), Query Frame = 1
Query: 49 SRPLPLDKAGTARWLIRKNTWGFLATTSV--HLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKSCLTD----PQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEYFAAS 549
S P +KA TAR+L+ W +ATTS + G PF NV SF DG TG+PYFYV+D+D S QD++ NP+ SFT++E E D P+DP CA++T++G M +VT+ + + A +LF H MK WP H + V +L+I +WL+D++GG + +P+ +YFAA+
Sbjct: 35 SPPPHQEKAKTARYLVHATLWAVVATTSTLKEIAGIPFSNVFSFCDG-PIGNGTGIPYFYVTDLDVSMQDVMTNPIVSFTLSEMETQYCGDQDFDPEDPRCARLTLSGKMVNVTNSEKRAFALASLFKRHPVMKYWPSSHDFHVTKLEIDMIWLLDYFGGGSVVPLDDYFAAN 206
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Match: A0A0C9RHU3_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_19717_836 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RHU3_9SPER) HSP 1 Score: 144 bits (362), Expect = 4.830e-40 Identity = 72/159 (45.28%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 67 DKAGTARWLIRKNTWGFLATTSVHLDGAPFGNVASFVDGTSTEKSTGVPYFYVSDMDTSQQDLLANPVCSFTVAEAEKSCL--TDPQDPTCAKVTMTGVMADVTDPAELSAARDALFAAHQEMKVWPVGHGWRVRRLDIRHVWLVDFYGGAADIPVAEY 537
D TARWL+ +NTWG L+TTS+ L G PFGNV SF DG K TG+PYFY++ +D + +DL + CSFTV+E TDP++PTC+K+T+TG M + + E A ALF+ H EM WP H + +L I +++L+D++GG + V EY
Sbjct: 39 DAHATARWLVSQNTWGILSTTSIDLQGVPFGNVVSFSDG-PPGKETGIPYFYLTSLDPTARDLQKDSHCSFTVSEVPLGTCKETDPENPTCSKLTLTGKMELIMNGPEADFAAQALFSKHGEMTDWPADHDFHFFKLVIENIFLIDWFGGPKPLSVEEY 196 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2080.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2080.4.2 >prot_P-wetherbeei_contig2080.4.2 ID=prot_P-wetherbeei_contig2080.4.2|Name=mRNA_P-wetherbeei_contig2080.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MKAISFLFFVGVAAATSRPLPLDKAGTARWLIRKNTWGFLATTSVHLDGAback to top mRNA from alignment at P-wetherbeei_contig2080:4212..5431+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2080.4.2 ID=mRNA_P-wetherbeei_contig2080.4.2|Name=mRNA_P-wetherbeei_contig2080.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1220bp|location=Sequence derived from alignment at P-wetherbeei_contig2080:4212..5431+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2080:4212..5431+ >mRNA_P-wetherbeei_contig2080.4.2 ID=mRNA_P-wetherbeei_contig2080.4.2|Name=mRNA_P-wetherbeei_contig2080.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig2080:4212..5431+ (Phaeothamnion wetherbeei SAG_119_79)back to top |