mRNA_P-wetherbeei_contig20799.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A2E2BCN4_9GAMM (Sec-independent protein translocase protein TatA n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BCN4_9GAMM) HSP 1 Score: 78.6 bits (192), Expect = 1.060e-17 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 1 MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQVIEGEARTERE 207
MGF I+ LVVLL+IV L+FGTKKIK VG+DVGGWIRDFKKAM+E+ + K +A Q IE E +E+E
Sbjct: 1 MGFGIKELVVLLVIVALVFGTKKIKGVGSDVGGWIRDFKKAMKEEPTETDPLKGEA-QTIEAEVTSEKE 68
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A3D5DCD1_9GAMM (Sec-independent protein translocase protein TatA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCD1_9GAMM) HSP 1 Score: 77.8 bits (190), Expect = 2.200e-17 Identity = 38/66 (57.58%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 1 MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMRE--DTPDETVAKNDAKQVIEGEA 192
M F I+ L+V+L+IV+L+FGTKKI+NVG DVGGWIRDFK+A+++ D PD+ K D +VIEG++
Sbjct: 1 MSFGIKELIVILVIVMLVFGTKKIRNVGTDVGGWIRDFKRALKDGQDAPDDAAKKTDPGRVIEGDS 66
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A523P079_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P079_9PROT) HSP 1 Score: 68.2 bits (165), Expect = 1.480e-13 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 1 MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPD----ETVAKNDAKQVIEGE-ARTEREH 210
M F I+ L+V+L+IV+L+FGTKKI++VG DVG WIRDFKKA+++ D + V + + +VIEGE A E+E+
Sbjct: 1 MSFGIKELIVILVIVMLVFGTKKIRSVGTDVGSWIRDFKKALKDGEDDADADDVVVETKSSRVIEGETAPVEKEN 75
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A1J4ZFM8_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Gallionellaceae bacterium CG1_02_60_948 TaxID=1805163 RepID=A0A1J4ZFM8_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 7.730e-13 Identity = 35/70 (50.00%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 4 GFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAK-NDAKQVIEGEARTEREH 210
FSI H +++L++VIL+FGTKK++N+G+D+GG ++ FK MR D DE+ K D QVIEGEA+ + +H
Sbjct: 3 SFSIWHWLIVLLVVILIFGTKKLRNIGSDLGGAVKGFKDGMRSD--DESAKKVRDGDQVIEGEAKDKTQH 70
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A257N4V2_9GAMM (Sec-independent protein translocase protein TatA n=3 Tax=unclassified Methylococcaceae TaxID=51352 RepID=A0A257N4V2_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 4.350e-12 Identity = 33/68 (48.53%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQVIEGEARTER 204
MG I+ L+V+L+IVI+LFGTKK++NVGAD+GG I+ F+ A++E D+T A+N+ + I+GE +++
Sbjct: 1 MGIGIKELLVILVIVIVLFGTKKLRNVGADLGGAIKSFRSAVKEGEEDKTHAENEG-ETIDGEVTSKK 67
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: UPI001C0E3FBA (Sec-independent protein translocase subunit TatA n=2 Tax=Acinetobacter baumannii TaxID=470 RepID=UPI001C0E3FBA) HSP 1 Score: 64.3 bits (155), Expect = 4.350e-12 Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 4 GFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQV 177
G SI H+++ I+VILLFGT K+KN+G DVGG ++DFKK+MRED +T A N++K +
Sbjct: 3 GLSIWHVIIFAIVVILLFGTSKLKNIGKDVGGAVKDFKKSMRED---DTAALNNSKTI 57
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: F0KM53_ACICP (Sec-independent protein translocase protein TatA n=23 Tax=Acinetobacter TaxID=469 RepID=F0KM53_ACICP) HSP 1 Score: 64.3 bits (155), Expect = 4.460e-12 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 4 GFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQVIEGEART 198
G SI H+V+ I+VILLFGT K+KN+G DVGG ++DFKK++RED DET A N + I+ + +T
Sbjct: 3 GLSIWHVVIFAIVVILLFGTSKLKNIGKDVGGAVKDFKKSVRED--DETTALNTPR-TIDAQVKT 64
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A177MBC4_METMH (Sec-independent protein translocase protein TatA n=6 Tax=Methylomonas TaxID=416 RepID=A0A177MBC4_METMH) HSP 1 Score: 63.9 bits (154), Expect = 6.170e-12 Identity = 32/63 (50.79%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 1 MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQVIEGE 189
MG SI HL+V+L+IVIL+FGTK++KN+G+D+G IR F+ A++E + D+T+A+ + ++ +EGE
Sbjct: 1 MGLSIPHLLVVLVIVILVFGTKRLKNIGSDLGEAIRGFRSAVKEGSEDKTIARKE-EEPLEGE 62
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A1F4CVU7_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CVU7_9PROT) HSP 1 Score: 63.9 bits (154), Expect = 6.820e-12 Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 4 GFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMRE--DTPDETVAKNDAKQVIEGEARTEREH 210
FSI H +++L+IV+L+FGTKK++N+GAD+GG +R FK MRE + P E A + + +EGE + + EH
Sbjct: 3 SFSIWHWLIVLVIVMLIFGTKKLRNMGADLGGAVRGFKDGMREGAEKPAEGAAPQETGKTVEGEVKGKTEH 73
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Match: A0A4R3XXU4_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3XXU4_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 8.760e-12 Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 4 GFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETVAKNDAKQVIEGEAR 195
FSI H +++L+IV+++FGTKK++N+G DVGG ++ FK AMRE+ + ++A Q I+GE +
Sbjct: 3 SFSIWHWLIVLVIVLVIFGTKKLRNMGGDVGGAVKSFKDAMREEEKSSKIGTSEAGQTIDGEVK 66 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20799.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20799.2.1 >prot_P-wetherbeei_contig20799.2.1 ID=prot_P-wetherbeei_contig20799.2.1|Name=mRNA_P-wetherbeei_contig20799.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp MGFSIQHLVVLLIIVILLFGTKKIKNVGADVGGWIRDFKKAMREDTPDETback to top mRNA from alignment at P-wetherbeei_contig20799:580..795+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20799.2.1 ID=mRNA_P-wetherbeei_contig20799.2.1|Name=mRNA_P-wetherbeei_contig20799.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig20799:580..795+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20799:580..795+ >mRNA_P-wetherbeei_contig20799.2.1 ID=mRNA_P-wetherbeei_contig20799.2.1|Name=mRNA_P-wetherbeei_contig20799.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig20799:580..795+ (Phaeothamnion wetherbeei SAG_119_79)back to top |