mRNA_P-wetherbeei_contig20795.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20795.1.1
Unique NamemRNA_P-wetherbeei_contig20795.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A6L5FRV4_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FRV4_9HYPH)

HSP 1 Score: 367 bits (942), Expect = 1.470e-123
Identity = 187/313 (59.74%), Postives = 236/313 (75.40%), Query Frame = 1
Query:   34 AALAIAGLALP---AVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGAGL 963
            AA+A+   ++P   A AQ++P+ +IRI +GFGPGS  D++ RL G+H+E K G+PV+VE+R GN SMIAAE V++A KDG+TLF+GTVA TL P R    F L +DM PV+LLA+VPNL+VAHPS+  KD+  L+ +AK+KPD LTFGTSGAGTASHLA ELFNQ  G KIV VHYQ GSNQ L DLL GRI + FN A TL PHV++ AL A+ VAQ  R  +LP VPT+AE G+ G DAGIW+GLLAP GTP  IA  L++A+ EAL  +AV KVL  QGID LGG+P EF++FI  DI+KW +V++ +GL
Sbjct:   40 AAIAVGWASVPPGAAGAQQYPSGTIRIVIGFGPGSTVDIVGRLIGRHIEQKFGQPVVVESRLGNGSMIAAEAVSRAPKDGYTLFIGTVANTLNPTRTNSKFNLGKDMQPVALLAVVPNLMVAHPSVPAKDIKELVALAKAKPDMLTFGTSGAGTASHLAVELFNQTAGTKIVAVHYQGGSNQVLTDLLTGRITMAFNVAVTLTPHVKSGALKAMAVAQPKRAGILPDVPTLAEAGMPGVDAGIWVGLLAPPGTPADIANKLSAAANEALKADAVKKVLDTQGIDPLGGSPEEFSKFIDADIKKWEQVLTASGL 352          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A537Q322_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q322_9PROT)

HSP 1 Score: 362 bits (929), Expect = 5.340e-122
Identity = 188/318 (59.12%), Postives = 237/318 (74.53%), Query Frame = 1
Query:   10 RIFTY-ATAAALAIAGLALPAVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGAG 960
            RIF   A  A ++IAG A  A AQ +PTQ I++ +GFGPGS AD+LARL GK +E  LG+P++VENRPGNSSMIAAE VA+A  DG+TLFM T+A TL P   K +F L ++M P++LL  VPN+LVAHPS+   ++  L+ +AKSKP++LTFG+SG  TAS++AAELFN + G KIV V YQ GSNQA+ DLL+GRI L+FN A+TL PHVE   L A  VAQA R  ++P VPT+AE G++G+DAGIWIGLLAPAGTPP I E L++A+ +AL TEAV   L  QG D +GGTP EFA FI  DIEKWS  ++ +G
Sbjct:    7 RIFALCAGVAVMSIAGAAA-ATAQAYPTQPIKVLIGFGPGSAADILARLVGKQMEVSLGQPIVVENRPGNSSMIAAETVARAPADGYTLFMATIANTLNPAETKSNFNLGKEMAPITLLGTVPNVLVAHPSVPASNLQELVALAKSKPETLTFGSSGYATASYMAAELFNAKAGTKIVTVPYQGGSNQAVSDLLSGRITLMFNVAATLAPHVEAGKLKAFAVAQAKRASIMPDVPTLAEAGMSGYDAGIWIGLLAPAGTPPAIIEKLSAAANDALNTEAVRTALKLQGTDPVGGTPKEFADFIRADIEKWSAALASSG 323          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A1Q4BB48_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4BB48_9HYPH)

HSP 1 Score: 346 bits (887), Expect = 1.140e-115
Identity = 182/308 (59.09%), Postives = 220/308 (71.43%), Query Frame = 1
Query:   34 AALAIAGLALPAVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGA 957
            AA A+   + P +AQ FP+  +RI VGFG GS AD+LARL G+H+E +LG+PVIVENRPGNSSM+AAE VA+A KDG TLFM TVA TL PV+    F L RDM PV+LL I PN+LV HPS+  + V  L+ IAKSKPD+LTFGTSGAGTAS LA  LFN + G+ +V V YQ G+NQ + DLL GRIN +FN    L PHV + ALVAL V Q  R  +LP VPTM EQG+ GFD GIWIGLLAPAGTP  I + LA  +  AL TEAV   L  QGID +G +P+EF+ FI  DIEKW  +++ +
Sbjct:   13 AACALFVSSAPLLAQTFPSGPVRIIVGFGAGSTADILARLVGRHMETELGQPVIVENRPGNSSMVAAEAVARAPKDGQTLFMATVANTLNPVQAGSPFNLGRDMAPVALLGISPNVLVVHPSVQARTVKDLMAIAKSKPDTLTFGTSGAGTASDLATRLFNIKAGSNVVSVPYQGGANQGMSDLLTGRINAMFNVGVALAPHVASGALVALAVGQPKRATILPDVPTMEEQGIPGFDVGIWIGLLAPAGTPAAIVDRLAQGANGALKTEAVETALKTQGIDPIGASPSEFSAFIVADIEKWRAILAAS 320          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A1M5VY19_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M5VY19_9BRAD)

HSP 1 Score: 342 bits (876), Expect = 5.860e-114
Identity = 171/297 (57.58%), Postives = 222/297 (74.75%), Query Frame = 1
Query:   67 AVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGA 957
            AVAQ +P+Q I++ +GFGPGS AD+LARL GK +E  LG+P++VENR GNSSMIAAE VA+AA DG+TLFM T+A TL P   K  F L + + P++LL IVPN+LVA+PS+   ++  LI +AKSKP+SL+FG+SG  TAS++A ELFN + G KI+ V YQ GS+QA+ DLL+GRI L+FN A+TL PHVE   L A  VAQ+ R  ++P VPT+ E G+AGFDAG+WIGLLAPAGTPP I + L++A+  AL T+ V   L  QG D +GGTP EFA FI  DIEKW+ V++ +
Sbjct:   26 AVAQTYPSQPIKVVIGFGPGSAADILARLVGKQMEVSLGQPIVVENRLGNSSMIAAESVARAAPDGYTLFMATIANTLNPAETKSSFNLGKALAPIALLGIVPNVLVANPSVPANNLQELIALAKSKPESLSFGSSGYATASYMAGELFNAKAGTKILAVPYQGGSSQAVSDLLSGRITLMFNVAATLAPHVEAGRLKAFAVAQSKRASIMPDVPTLTEAGMAGFDAGVWIGLLAPAGTPPAIIDKLSAAANAALNTDQVQSALKQQGTDPVGGTPKEFADFIQADIEKWTAVLASS 322          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A1M6MRQ6_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6MRQ6_9BRAD)

HSP 1 Score: 341 bits (875), Expect = 8.590e-114
Identity = 172/296 (58.11%), Postives = 221/296 (74.66%), Query Frame = 1
Query:   70 VAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGA 957
            +AQ +PTQ I+I +GFGPGS AD+LARL GK +E+ LG+P+++ENRPGNSSMIAAE VA+A  DG+TLFM T+A TL P   K +F L + + PV LL IVPN+LVAHPS+   ++  LI +AKSKP++LTFG+SG  TAS++AAELFN++ G KI +V YQ GSNQA+ DLLAGRI L+FN A+TL P VE   L A  VAQ+ R  ++P VPT++E G+ G+DAGIWIGLLAPAGTPP I + L++A+  AL  E V   L  QG D +GG+P EFA FI  DIEKW  V++ +
Sbjct:   27 MAQTYPTQPIKILIGFGPGSAADILARLVGKQMESNLGQPIVIENRPGNSSMIAAETVARAPADGYTLFMATIANTLNPAETKSNFNLAKALAPVVLLGIVPNVLVAHPSVPANNLAELIALAKSKPETLTFGSSGYATASYMAAELFNEKAGTKIPMVPYQGGSNQAVSDLLAGRITLMFNVAATLAPQVEAGRLKAFAVAQSKRASIMPDVPTLSEAGMTGYDAGIWIGLLAPAGTPPAIVDKLSAAANAALSNEGVRAALKQQGTDPVGGSPKEFADFIHADIEKWVAVLASS 322          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A1H4W9N3_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Beijerinckia sp. 28-YEA-48 TaxID=1882748 RepID=A0A1H4W9N3_9HYPH)

HSP 1 Score: 341 bits (874), Expect = 1.220e-113
Identity = 173/297 (58.25%), Postives = 215/297 (72.39%), Query Frame = 1
Query:   67 AVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGA 957
            A AQ  P+  +RI VGFG GS AD++ARL G+H+E+ +G+P+IVENRPGNSSM+AAE VA+A KDG TLFM TVA TL PV+ ++ F L +DM PV+LL + PN+LV HPS+  ++V  L+ IAKSKPD+LTFGTSGAGTAS LA  LFN + G+ +V V YQ G+NQ + DLL GRIN +FN    L PHV + ALVAL V Q  R  +LP VPTM EQG+ GFD GIWIGLLAP GTP  I + +A A+  AL TE V   L  QGID +G TPAEF +FI  DIEKW  +++ +
Sbjct:   28 AAAQTSPSGPVRIIVGFGAGSTADIVARLVGRHMESVIGQPIIVENRPGNSSMVAAETVARAPKDGQTLFMATVANTLNPVQARLPFNLGKDMEPVALLGVSPNVLVVHPSVAARNVKELMAIAKSKPDTLTFGTSGAGTASDLATRLFNIKAGSNVVSVPYQGGANQGMTDLLTGRINAMFNVGVALAPHVASGALVALAVGQPKRATILPDVPTMDEQGIPGFDVGIWIGLLAPGGTPASIVDQMAQAANGALKTEMVMTSLKTQGIDPIGATPAEFRKFIEADIEKWRSILAAS 324          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: UPI00131E7D73 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI00131E7D73)

HSP 1 Score: 340 bits (871), Expect = 3.360e-113
Identity = 175/309 (56.63%), Postives = 221/309 (71.52%), Query Frame = 1
Query:   10 RIFTYATAAALAIAGLALPAVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKW 936
            ++     AA + +   A  A AQ +P + I+I +GFGPGS AD+LARL G+ +E  LG+P+IVENR GNSSM+AAE VA+A  DG+TLFM T+A TL P   K DF L RD+ P+ LL +VPN+LVA+PS+   ++  LI +AKSKP+SL+FG+SG  TAS++AAELFN + G KI+ V YQ GSNQA+ DLL+GRI L+FN A TL P VE   L A  VAQ  R  ++P VPT+AE G+ G+DAGIWIGLLAP GTPP I E L++A+  AL T+AV   L  QG D +GGTPAEFA FI  DIEKW
Sbjct:    7 KLMVLGAAATITLVASAALAEAQTYPARPIKIVIGFGPGSAADILARLVGRQMEVSLGQPIIVENRSGNSSMLAAETVARAPADGYTLFMATIANTLNPAETKADFNLGRDLAPIVLLGVVPNVLVANPSVPANNLQELIALAKSKPESLSFGSSGYATASYMAAELFNAKAGTKILTVPYQGGSNQAVSDLLSGRITLMFNVAPTLAPQVEAGKLKAFAVAQPKRASIMPNVPTLAEAGMTGYDAGIWIGLLAPTGTPPAIIEKLSAAANAALNTDAVRTGLKQQGTDPIGGTPAEFADFIRADIEKW 315          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A0D7PGY7_9BRAD (Uncharacterized protein n=4 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A0D7PGY7_9BRAD)

HSP 1 Score: 339 bits (869), Expect = 5.330e-113
Identity = 175/302 (57.95%), Postives = 216/302 (71.52%), Query Frame = 1
Query:   64 PAVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKWSKVVSGAGLYE 969
            PA A  +    +R+ VGFGP S AD++ARL  +HLE  LG+PVIVENRPGNSSM+AAE VA+A  DG TLF+ TVA T+ P R K  F L +++ P++LL +VPN+LVA+PSL VK V  LI +AK +   LTFGTSG  TASH+A  +FN + G  IV V YQ G++QA+ DLLAGRINL+FN A+ L P V +  L AL V Q  RT +LP VPTM E GL GFD G+WIGLLAPAGT P+I + LA AS EAL   ++ + L AQGI+ LGGTPAEFA FIA+DIEKW  ++  AGL E
Sbjct:   18 PANAAPYQAGPVRLVVGFGPASPADIVARLVARHLEEALGKPVIVENRPGNSSMLAAEAVARAPNDGRTLFVATVANTINPARMKSGFDLGKELAPIALLGVVPNVLVANPSLPVKTVGDLIALAKQQTGQLTFGTSGLWTASHMAVAMFNMKAGTDIVAVPYQGGASQAVTDLLAGRINLMFNVAAPLAPFVASGQLTALAVGQPKRTAILPDVPTMEEAGLTGFDVGVWIGLLAPAGTAPEIIDTLAKASNEALQQPSIREALKAQGIEVLGGTPAEFASFIARDIEKWRSLIEAAGLKE 319          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: A0A1H0DSU4_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1H0DSU4_9BRAD)

HSP 1 Score: 335 bits (860), Expect = 1.510e-111
Identity = 171/290 (58.97%), Postives = 214/290 (73.79%), Query Frame = 1
Query:   67 AVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKW 936
            A A+ +P+Q I+I VGFGP S AD+L RL GK +EAKLG+PVIVENR GNSSMI AE VA+A  DG+TLF  T+A TL P + K  F L + + P++LL +VPN+LVAHPS+   ++  LI +AKS+P++LTFG+SGAGTASH+AAELFNQ+ G  +V+V YQ GSNQA+ DLLAGRI L+FN A+TL PHVE   L A  VAQ  R  ++P VPT+AE G+  +DAG+WIGLLAPAGTP  I + L+ A+ EAL  E V K L  QG D +G TP EFA FI  D+EKW
Sbjct:   25 AAAETYPSQPIKIVVGFGPASAADILTRLVGKRMEAKLGQPVIVENRAGNSSMIGAEAVARAPADGYTLFTATIANTLNPAQTKSSFDLGKMLAPIALLGVVPNVLVAHPSVPASNLGELIALAKSRPETLTFGSSGAGTASHMAAELFNQKAGTSVVIVPYQGGSNQAVSDLLAGRITLMFNVAATLAPHVEAGKLKAFAVAQPRRATIMPDVPTLAEAGMNEYDAGVWIGLLAPAGTPSAIIDRLSIAANEALKDEEVQKALKLQGTDPVGSTPKEFADFIRADVEKW 314          
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Match: UPI00110EE501 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00110EE501)

HSP 1 Score: 334 bits (856), Expect = 1.270e-110
Identity = 168/290 (57.93%), Postives = 213/290 (73.45%), Query Frame = 1
Query:   67 AVAQEFPTQSIRIAVGFGPGSVADVLARLTGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLVPVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPDSLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRINLIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGIWIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEFARFIAQDIEKW 936
            A A+ +PTQ I+I VGFGPGS AD+L RL  K +E KLG+PVI+ENR GNSSMI AE VA+A  DG+ LF  T+A TL P + K  F L + + P++LL +VPN+LVAHPS+   ++  LI +AKS+P++LTFG+SGAGTASH+AAELFNQ+ G  +V+V YQ GSNQA+ DLLAGRI L+FN A+TL PHVE   L A  VAQ  R  ++P VPT+AE G++ +DAG+WIGLLAPAGTP  I + L+ A+ EAL  E V + L  QG D +G TP EFA FI  D+EKW
Sbjct:   47 AAAENYPTQPIKIVVGFGPGSAADILTRLVSKRMETKLGQPVIIENRAGNSSMIGAEAVARAPADGYALFTATIANTLNPAQTKSSFDLGKMLAPIALLGVVPNVLVAHPSVPASNLSELIALAKSRPETLTFGSSGAGTASHMAAELFNQKAGTSVVIVPYQGGSNQAVSDLLAGRITLMFNVAATLAPHVEAGKLKAFAVAQPRRATIMPNVPTLAEAGMSEYDAGVWIGLLAPAGTPSAIIDRLSIAANEALKDEEVQRALKLQGTDPVGSTPKEFADFIRADVEKW 336          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20795.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FRV4_9HYPH1.470e-12359.74Tripartite tricarboxylate transporter substrate bi... [more]
A0A537Q322_9PROT5.340e-12259.12Tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q4BB48_9HYPH1.140e-11559.09Uncharacterized protein n=1 Tax=Rhizobiales bacter... [more]
A0A1M5VY19_9BRAD5.860e-11457.58Tripartite-type tricarboxylate transporter, recept... [more]
A0A1M6MRQ6_9BRAD8.590e-11458.11Tripartite-type tricarboxylate transporter, recept... [more]
A0A1H4W9N3_9HYPH1.220e-11358.25Tripartite-type tricarboxylate transporter, recept... [more]
UPI00131E7D733.360e-11356.63tripartite tricarboxylate transporter substrate bi... [more]
A0A0D7PGY7_9BRAD5.330e-11357.95Uncharacterized protein n=4 Tax=unclassified Brady... [more]
A0A1H0DSU4_9BRAD1.510e-11158.97Tripartite-type tricarboxylate transporter, recept... [more]
UPI00110EE5011.270e-11057.93tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20795contigP-wetherbeei_contig20795:57..1028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog596153.Alide_0025
PFAMsTctC
Model size972
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.29e-71
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VPJ4@28216|Betaproteobacteria,4AH22@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size969
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186208.6585941-CDS-P-wetherbeei_contig20795:56..10251683186208.6585941-CDS-P-wetherbeei_contig20795:56..1025Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20795 57..1025 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186208.6699462-UTR-P-wetherbeei_contig20795:1025..10281683186208.6699462-UTR-P-wetherbeei_contig20795:1025..1028Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20795 1026..1028 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20795.1.1prot_P-wetherbeei_contig20795.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20795 57..1025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20795.1.1

>prot_P-wetherbeei_contig20795.1.1 ID=prot_P-wetherbeei_contig20795.1.1|Name=mRNA_P-wetherbeei_contig20795.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MSRIFTYATAAALAIAGLALPAVAQEFPTQSIRIAVGFGPGSVADVLARL
TGKHLEAKLGRPVIVENRPGNSSMIAAEQVAKAAKDGHTLFMGTVAQTLV
PVRKKMDFKLDRDMTPVSLLAIVPNLLVAHPSLGVKDVPGLIGIAKSKPD
SLTFGTSGAGTASHLAAELFNQRVGAKIVVVHYQAGSNQALVDLLAGRIN
LIFNTASTLVPHVENKALVALGVAQAARTKVLPQVPTMAEQGLAGFDAGI
WIGLLAPAGTPPKIAEVLASASTEALGTEAVAKVLSAQGIDALGGTPAEF
ARFIAQDIEKWSKVVSGAGLYE*
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mRNA from alignment at P-wetherbeei_contig20795:57..1028-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20795.1.1 ID=mRNA_P-wetherbeei_contig20795.1.1|Name=mRNA_P-wetherbeei_contig20795.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig20795:57..1028- (Phaeothamnion wetherbeei SAG_119_79)
CAGATGTCACGTATCTTCACCTATGCGACTGCAGCCGCTCTCGCCATCGC CGGACTTGCCCTTCCCGCCGTAGCTCAGGAATTCCCGACGCAATCGATCC GTATTGCCGTCGGCTTCGGGCCGGGATCGGTCGCGGATGTGCTGGCGCGT CTCACCGGCAAGCATCTGGAAGCAAAGCTCGGGCGTCCCGTGATCGTGGA GAACCGGCCGGGCAACTCCAGCATGATCGCCGCCGAGCAGGTCGCCAAGG CGGCCAAGGACGGACACACGCTGTTCATGGGTACCGTCGCGCAGACGCTG GTCCCCGTGCGCAAAAAGATGGACTTCAAGCTCGACCGCGACATGACGCC GGTATCGCTGCTGGCGATCGTGCCCAATCTGCTCGTCGCGCATCCCTCGC TCGGCGTGAAGGACGTGCCGGGCCTGATCGGGATCGCGAAATCGAAGCCC GACAGCCTCACCTTCGGCACCTCGGGCGCGGGTACGGCGAGCCATCTGGC GGCGGAATTGTTCAATCAGCGCGTCGGCGCCAAGATCGTGGTCGTGCACT ATCAGGCGGGCAGCAATCAGGCGCTCGTCGATCTCCTGGCGGGCCGCATC AACCTGATCTTCAACACGGCCTCGACGCTCGTGCCGCACGTGGAGAACAA GGCGCTGGTTGCGCTCGGCGTTGCGCAAGCCGCACGCACCAAGGTTCTCC CGCAGGTGCCGACGATGGCGGAGCAGGGGCTCGCCGGGTTCGACGCCGGC ATCTGGATCGGGTTGCTGGCGCCGGCGGGAACGCCGCCAAAGATCGCGGA GGTGCTCGCGTCGGCCTCGACGGAAGCCCTGGGAACGGAAGCGGTCGCAA AGGTTTTGAGCGCGCAGGGTATCGATGCGCTCGGGGGCACACCGGCCGAA TTCGCGCGCTTCATCGCACAGGACATCGAGAAGTGGTCGAAGGTCGTGAG CGGGGCCGGGCTGTACGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20795:57..1028-

>mRNA_P-wetherbeei_contig20795.1.1 ID=mRNA_P-wetherbeei_contig20795.1.1|Name=mRNA_P-wetherbeei_contig20795.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig20795:57..1028- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCACGTATCTTCACCTATGCGACTGCAGCCGCTCTCGCCATCGCCGG
ACTTGCCCTTCCCGCCGTAGCTCAGGAATTCCCGACGCAATCGATCCGTA
TTGCCGTCGGCTTCGGGCCGGGATCGGTCGCGGATGTGCTGGCGCGTCTC
ACCGGCAAGCATCTGGAAGCAAAGCTCGGGCGTCCCGTGATCGTGGAGAA
CCGGCCGGGCAACTCCAGCATGATCGCCGCCGAGCAGGTCGCCAAGGCGG
CCAAGGACGGACACACGCTGTTCATGGGTACCGTCGCGCAGACGCTGGTC
CCCGTGCGCAAAAAGATGGACTTCAAGCTCGACCGCGACATGACGCCGGT
ATCGCTGCTGGCGATCGTGCCCAATCTGCTCGTCGCGCATCCCTCGCTCG
GCGTGAAGGACGTGCCGGGCCTGATCGGGATCGCGAAATCGAAGCCCGAC
AGCCTCACCTTCGGCACCTCGGGCGCGGGTACGGCGAGCCATCTGGCGGC
GGAATTGTTCAATCAGCGCGTCGGCGCCAAGATCGTGGTCGTGCACTATC
AGGCGGGCAGCAATCAGGCGCTCGTCGATCTCCTGGCGGGCCGCATCAAC
CTGATCTTCAACACGGCCTCGACGCTCGTGCCGCACGTGGAGAACAAGGC
GCTGGTTGCGCTCGGCGTTGCGCAAGCCGCACGCACCAAGGTTCTCCCGC
AGGTGCCGACGATGGCGGAGCAGGGGCTCGCCGGGTTCGACGCCGGCATC
TGGATCGGGTTGCTGGCGCCGGCGGGAACGCCGCCAAAGATCGCGGAGGT
GCTCGCGTCGGCCTCGACGGAAGCCCTGGGAACGGAAGCGGTCGCAAAGG
TTTTGAGCGCGCAGGGTATCGATGCGCTCGGGGGCACACCGGCCGAATTC
GCGCGCTTCATCGCACAGGACATCGAGAAGTGGTCGAAGGTCGTGAGCGG
GGCCGGGCTGTACGAGTAG
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