mRNA_P-wetherbeei_contig2079.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2079.1.1
Unique NamemRNA_P-wetherbeei_contig2079.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A6H5JST1_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST1_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 8.600e-79
Identity = 128/250 (51.20%), Postives = 170/250 (68.00%), Query Frame = 1
Query:    4 KTEVLGIYSGTAFAAALLCHVVRWLLLHDARTSKLSRAADYAGPAQVATFVFLWYGISVSFTIINRWMYVDWRG-GFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQL 750
            K +V+G Y    F  A +   V+ LLL DA  S+LS+AADY    ++A +V  WYG+SVS  + NRW++ +W+G GFPFP+LTT VHM +K L +RV    +G++P  L  +V      PIG+ATA D+LLSN SF+  +V+FYTI KSGSL+WILLWA VFR E  + ++V VV     GL LAS GETDFS  GLL++L +SC+ G RW L QLLQ ++  C+D L  +YHIAPSSA+AM P AL+ +
Sbjct:    4 KGDVMGAYCLVTFFGASILFGVKHLLLRDATFSRLSKAADYVPAVEIAAWVLTWYGVSVSMVMANRWLFYEWQGVGFPFPVLTTMVHMWLKVLVTRVMYCFKGEKPPHLDVSVNLRTVIPIGLATAGDILLSNLSFMVATVAFYTIVKSGSLIWILLWAVVFRFEALTPKMVSVVLITSVGLFLASLGETDFSTEGLLLILGASCLSGLRWGLLQLLQAIEPSCHDPLLVIYHIAPSSAIAMTPMALLDI 253          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A835ZEZ4_9STRA (Triose-phosphate transporter family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.870e-56
Identity = 102/204 (50.00%), Postives = 130/204 (63.73%), Query Frame = 1
Query:  250 TGVHMVIKYLASRVA-----------VWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEFGAPRPLAEGALLMFCGG 828
            T  HM +K+  SR A             +R + P  L R +YW  AAPIG+ TAADVL+SNAS +FI+V+FYTIAK+G+L+W LLWA V RLE A     L++S I AGL +ASWGE DFSLPGLL+V+ + C GG RWALTQLLQ+ D  C D L  VYH+A +S   MLP  LI   P  +S+   +P  L + A ++  GG
Sbjct:    2 TACHMAVKFALSRAAFAAXXXXXXXGARLRRRAPEPLERRLYWRTAAPIGLLTAADVLMSNASLMFITVTFYTIAKTGTLMWTLLWAVVLRLEPARWVTALIISVITAGLAMASWGEIDFSLPGLLLVMGAGCAGGLRWALTQLLQQADPACKDPLVVVYHVAGASLAGMLPFVLIDAIPWAQSKFCDSPALLLQTAGIVAAGG 205          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A7S2FM58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FM58_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.260e-55
Identity = 118/282 (41.84%), Postives = 165/282 (58.51%), Query Frame = 1
Query:   13 VLGIYSGTAFAAALLCHVVRWLLLHDARTSKLSRAADYAGPAQVATFVFLWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAV-------WVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEFGAP---RPLAEGALLMFCGG 828
            VL  YS  AF+ A +  V   +L H +R    ++AA+      V T+VFLW+GISV+FT++N+W    WRGGF FPI  T  H+ +K L +R  V       + R   P  LP  +   +  PIG  TA DV+LSN SF F++V+FYTI KS +LVWILLWA +FR+E  +  + + V+ I  GL  AS+GET+FS+ GLL+++ +S  GG RWAL Q L  ++    D L  +YHIAP S + ML  A+   G  + ++E  A    +   E  +L F GG
Sbjct:    9 VLIAYSCVAFSLAGMSAVGARVLKHQSRYRPQAKAANLVQMMDVGTYVFLWFGISVTFTLLNKWFLTYWRGGFSFPITGTTGHIAMKALLARGLVDGRCGKYFERTVEPVPLPLTLQ--VIFPIGFMTATDVMLSNVSFKFVTVTFYTIVKSSTLVWILLWAVLFRIEKPNWAIAITVTVISLGLGCASYGETNFSMVGLLILIGASASGGLRWALIQRLMALEEMFEDPLIALYHIAPWSFITMLIMAVSIEGTHIFAKENLAQFQSQATLEALVLTFIGG 288          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A2R5GEA1_9STRA (Solute carrier family 35 member C2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEA1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.330e-53
Identity = 97/203 (47.78%), Postives = 137/203 (67.49%), Query Frame = 1
Query:  136 AQVATFVFLWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCN-DALTTVYHIAPSSALAMLPAAL 741
            A++A +  LW+G SVS  + N+W+   W GGF FP+L + +HM IKY  S   V        D+PR V+W  A P+G ATA DV  SNAS+L++SV+FYTI KS SLV+ LL++ +++L+  S  L   VS I  G+ LAS G+T+FS  G L+V+ SS VGGFRW+LTQ+L +    CN DA+ T+Y I+P+SAL+++P +L
Sbjct:   13 AEIAYWSALWFGFSVSMVVYNKWLLHSWEGGFNFPLLISMLHMGIKYFLSLAMVRCNSFAIPDIPRRVWWLSAVPVGCATALDVAASNASYLYVSVTFYTIVKSSSLVFTLLFSVLYKLQPCSLSLFCAVSVIVVGVVLASMGDTEFSTIGFLLVIGSSAVGGFRWSLTQVLMK-QIRCNLDAILTIYLISPASALSLIPLSL 214          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A8K1CFW6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFW6_PYTOL)

HSP 1 Score: 179 bits (454), Expect = 7.320e-50
Identity = 98/232 (42.24%), Postives = 142/232 (61.21%), Query Frame = 1
Query:  142 VATFVFLWYGISVSFTIINRWMYVDWR-GGFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQ-LLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLG-PVLRSEEFGAPRPLAEGALLMFCGG 828
            V+ F+ LWYGIS+  T+ N+W    W  GG+PF    T ++M  K L SRV     G +  +LPRA+YW +A PIG+ T+ D++LSN SF +I+V+FYTI KSG  VW LL++     +  S  L  V+  I +G+ LAS+G T F L G L+VL++S +G  RW LTQ LL+ +D   N  L  VY+I+P+SA+ +LP AL   G  +L+S+     + L +  + +F  G
Sbjct:   73 VSVFIVLWYGISIGMTLFNKWFLRVWADGGYPFATTMTCINMFTKCLLSRVVNRCSGTKMTELPRAIYWRLAVPIGICTSLDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSYALFTVILLISSGIALASYGSTQFVLHGFLLVLSASIIGTLRWVLTQSLLKEMDESSNRILGVVYYISPASAVGLLPIALFSEGREILQSKFLLDSQLLIQSMIFIFVSG 304          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A6G0WE52_9STRA (TPT domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE52_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.790e-49
Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 1
Query:  142 VATFVFLWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQ-LLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEF-GAPRPLAEGALLMFCGG 828
            VA ++  WY +S++ T+ N+W    WRGGF F      VHM +K + SR+  W   +  A +    YW +  PIG+ T AD+++SN S  +I+VSF+TI KSG  VW LL++ +  L+  +  L++VV  IC G+ LAS+G   F L G L+VL +S +G  RW LTQ L+ R+D+  N AL+ VYHIAP SAL++LP AL+  G  L    F   P    E  L +  GG
Sbjct:   75 VAMYILAWYAMSITMTLFNKWFIKVWRGGFSFVFTIGCVHMTVKSILSRIVHWRHRRSIAPIASVNYWRLCVPIGLFTGADIVMSNMSLEYITVSFFTIVKSGGNVWNLLFSILLGLQKPTVPLLVVVVVICFGIGLASYGTIHFVLFGFLLVLFASILGTLRWVLTQFLMHRMDASQNKALSVVYHIAPMSALSLLPIALLVEGKALSQSVFVQTPALWGECILFLIAGG 305          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A2D4CJE1_PYTIN (TPT domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJE1_PYTIN)

HSP 1 Score: 169 bits (428), Expect = 3.270e-47
Identity = 91/214 (42.52%), Postives = 130/214 (60.75%), Query Frame = 1
Query:  142 VATFVFLWYGISVSFTIINRWMYVDWR-GGFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQ-LLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEF 777
            V+ ++ LWY IS+  T+ N+W    W  GGFPF    T ++M  K L SR+       +   LP  VYW +A PIG+ T+ D++LSN SF +I+V+FYTI KSG  VW LL++ +   +  S  L  V+  I +G++LAS+G T F L G ++VL +S +G  RW LTQ LL+ +D   N  L  VY+I+P+SAL +LP AL   GP +   +F
Sbjct:   72 VSVYIVLWYAISIGMTLFNKWFLRVWADGGFPFSTTMTCINMFTKCLLSRLMNRCATSKMTALPARVYWRLAVPIGLCTSLDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSILLGHQRPSYALFTVILLISSGISLASYGSTQFVLHGFVLVLCASIIGTLRWVLTQSLLKAMDESSNRILAVVYYISPASALGLLPIALATEGPAMLQSKF 285          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A7S2ANC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANC6_9STRA)

HSP 1 Score: 169 bits (428), Expect = 8.610e-47
Identity = 92/236 (38.98%), Postives = 139/236 (58.90%), Query Frame = 1
Query:  136 AQVATFVFLWYGISVSFTIINRWMYVDWR-GGFPFPILTTGVHMVIKYLASRVAVWVR----GKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEFGAPRPLAEGALLMFCGG 828
            +++A F  LW+G SVSFTI N+W++  W   G P+P++ T +HM++K + S++ V  R     +    LP  + + +  PI + TA D+ LSN S   ++V+FYTI K+GSL+W+LLWA +FRLE  S RL  +   I  GL L+++G+T FS  GL+++L +SC  G RW L Q+L   D+    ++  VYHIAP +A  M   AL    P + S+   +   +    LL   GG
Sbjct:   24 SEIAAFALLWFGTSVSFTIFNKWLFSYWHHDGLPYPLMATSLHMLLKAILSQIFVRCRCSPFHQTLDPLPMPLLFKVIIPIALCTAGDIALSNLSVQLVTVTFYTIIKAGSLLWVLLWAVIFRLEKPSLRLFGICFLIAGGLFLSTFGDTAFSRIGLVLILGASCASGIRWGLVQVLMGHDNEQFTSMVVVYHIAPWAATFMFLTALGMEAPKMLSDTSFSNEEILLTILLTLVGG 259          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: A0A7S2WCK0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCK0_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.720e-47
Identity = 92/227 (40.53%), Postives = 148/227 (65.20%), Query Frame = 1
Query:  160 LWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAVWVRGKRPAD----LPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQLLQRVDSGCN-DALTTVYHIAPSSALAMLPAALIQLGPVLRSEEFGAPRPLAEGALLMFCG 825
            LW+  SVS  + N+W+   W GGF FP+L +  HM++KY  S  +++VR  R  +    +PR+++W  A P+G+ATA DV  SNAS+++I+V+FYTI KS SL+++L+++ +++L+     L++ V  +  G+ LAS+G+T F+  G L+VL +S VGGFRWALTQ+L +    CN +A+ T+Y I+P+SAL ++P +L   GP   + +F     L   ++L   G
Sbjct:   74 LWFAFSVSLVVYNKWLLYSWEGGFDFPLLISMFHMMLKYALS--SLFVRCARSKEELPTIPRSIWWLSAVPVGIATALDVAGSNASYMYITVTFYTIVKSSSLIFVLVFSIMYKLQPMETGLIVSVFVVGLGVMLASYGDTTFNGIGFLLVLGTSFVGGFRWALTQVLMK-QIKCNLNAILTIYFISPASALTLIPLSLWLEGPRFITSKFVTQPHLLVLSILNIIG 297          
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Match: W4FC91_9STRA (TPT domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FC91_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.700e-46
Identity = 100/277 (36.10%), Postives = 148/277 (53.43%), Query Frame = 1
Query:    1 MKTEVLGIYSGTAFAAALLCHVVRWLLLHDARTSKLSRAADYAGPAQVATFVFLWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAVWVRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSGSLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMVLASSCVGGFRWALTQ-LLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQLGPVLRSEEFGAPRPLAEGALLMFCGG 828
            M   +L +  G +F A +L  +  WL +   +     +   +     VA  +  WY +S+S T+ N+W    W GGFPF      +HM IK L +R  +W      A +    YW +  PIG+ T AD+++SN S  +I+VSF+TI KSG  VW LL++    L+  S  L +VV  IC G+ LAS+G   F + G ++VL++S +G   W LTQ L+Q++D   N +L  V+HIAP SAL+++P AL+  G  L S  F     L    L+    G
Sbjct:   66 MSMSLLYLCLGLSFVAVVLVFLKLWLRMRSMQPPSTKQRVTHL--LDVAICILGWYAMSISMTLFNKWFVKVWHGGFPFVFTMGAIHMSIKALLTRAMLWRHPTAIAAISPHNYWRLCVPIGLFTGADIVMSNMSLRYITVSFFTIVKSGGNVWNLLFSIALGLQHLSPSLFIVVVVICVGIGLASYGTIHFVVIGFVLVLSASILGTLWWVLTQFLMQQMDPRQNKSLAVVFHIAPVSALSLVPIALVVDGAGLTSSVFARDMTLWMECLVFLTTG 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2079.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JST1_9PHAE8.600e-7951.20TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZEZ4_9STRA4.870e-5650.00Triose-phosphate transporter family-domain-contain... [more]
A0A7S2FM58_9STRA1.260e-5541.84Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GEA1_9STRA3.330e-5347.78Solute carrier family 35 member C2 n=1 Tax=Hondaea... [more]
A0A8K1CFW6_PYTOL7.320e-5042.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WE52_9STRA3.790e-4941.99TPT domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A2D4CJE1_PYTIN3.270e-4742.52TPT domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A7S2ANC6_9STRA8.610e-4738.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WCK0_9STRA9.720e-4740.53Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
W4FC91_9STRA1.700e-4636.10TPT domain-containing protein n=7 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2079contigP-wetherbeei_contig2079:120..1346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRB1
PFAMsTPT
Model size834
Max annot lvl2759|Eukaryota
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.12e-78
EggNOG OGsCOG0697@1|root,KOG1443@2759|Eukaryota
DescriptionUDP-glucose transmembrane transport
Cds size834
COG categoryEG
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186208.4694462-CDS-P-wetherbeei_contig2079:119..3671683186208.4694462-CDS-P-wetherbeei_contig2079:119..367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2079 120..367 -
1683186208.4806461-CDS-P-wetherbeei_contig2079:760..13461683186208.4806461-CDS-P-wetherbeei_contig2079:760..1346Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2079 761..1346 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2079.1.1prot_P-wetherbeei_contig2079.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2079 120..1346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2079.1.1

>prot_P-wetherbeei_contig2079.1.1 ID=prot_P-wetherbeei_contig2079.1.1|Name=mRNA_P-wetherbeei_contig2079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp
MKTEVLGIYSGTAFAAALLCHVVRWLLLHDARTSKLSRAADYAGPAQVAT
FVFLWYGISVSFTIINRWMYVDWRGGFPFPILTTGVHMVIKYLASRVAVW
VRGKRPADLPRAVYWSMAAPIGVATAADVLLSNASFLFISVSFYTIAKSG
SLVWILLWAAVFRLEVASCRLVLVVSFICAGLTLASWGETDFSLPGLLMV
LASSCVGGFRWALTQLLQRVDSGCNDALTTVYHIAPSSALAMLPAALIQL
GPVLRSEEFGAPRPLAEGALLMFCGGE*
back to top

mRNA from alignment at P-wetherbeei_contig2079:120..1346-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2079.1.1 ID=mRNA_P-wetherbeei_contig2079.1.1|Name=mRNA_P-wetherbeei_contig2079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig2079:120..1346- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGACCGAGGTGCTGGGCATCTATTCAGGCACCGCTTTCGCCGCGGC GTTGCTATGCCACGTCGTGCGATGGCTCCTTCTGCACGACGCCCGCACGA GCAAGCTCAGCAGGGCCGCCGACTACGCCGGCCCGGCCCAGGTCGCCACA TTCGTCTTTCTCTGGTACGGCATCAGCGTCTCGTTCACAATAATCAACCG CTGGATGTACGTCGACTGGCGGGGCGGCTTCCCCTTCCCCATCCTCACGA CTGGCGTCCACATGGTCATAAAATACCTCGCATCTCGCGTCGCCGTGTGG GTGCGCGGCAAGCGGCCCGCGGACCTGCCCCGCGCCGTGTATTGGAGCAT GGCGGCGCCCATCGGCGTGGCGACGGCCGCCGACGTCCTCTTGAGCAACG CATCCTTCCTCTTCATCTCGGTCTCCTTCTACACCATTGCCAAGAGCGGC AGCCTCGTCTGGATCCTGTTGTGGGCCGCCGTCTTCCGGCTGGAGGTGGC GTCCTGCCGCCTCGTGCTCGTCGTCTCTTTCATCTGCGCTGGCCTCACGC TGGCATCGTGGGGGGAAACCGACTTCTCATTGCCAGGTGCGTTGCGCGGG CGGGAAAGTTTCAAAAAGAAAAGCTGGTAGCGTGTCAGGAATGGTTCTTT TCTGCTTTTAATCTTCATGCTTTTCTTGATAAGGCTCCCTGGTTACGGTT TGGTAATGAGTCAGCAGTTTCGCCAACGGCGAAGGCTTCACTTGTCTAGC AAGAAACGCGTTCGAGCTGATTTGCTCTTTCATTTTCGACGAATCGAAGA GGTGTTGATCTTCGTTCGAACTGCTCATTTGAGCTTTTCAAAAGCTAGCG GCGAGCATTGCGGGCTGTCACAGTGTCGCATATTGTAGCGCCCGCCGACC TAACCGATCGGCCCCATCATGGCTTTAACGCAAGGGATTCTGATTTGCTT GCACCAAACCAATCCCCCCCTCTCCGCAGGGCTGCTGATGGTCTTGGCTT CGAGCTGCGTCGGCGGCTTCCGATGGGCGCTCACGCAGCTGCTGCAGCGG GTCGACTCAGGCTGCAACGACGCGCTGACGACGGTCTACCACATCGCGCC GTCGTCGGCGCTGGCCATGCTGCCTGCGGCGCTCATCCAGCTGGGGCCGG TGCTGCGCAGCGAGGAGTTCGGCGCGCCGCGGCCACTGGCGGAGGGTGCA CTGCTGATGTTTTGCGGCGGTGAGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig2079:120..1346-

>mRNA_P-wetherbeei_contig2079.1.1 ID=mRNA_P-wetherbeei_contig2079.1.1|Name=mRNA_P-wetherbeei_contig2079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig2079:120..1346- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGACCGAGGTGCTGGGCATCTATTCAGGCACCGCTTTCGCCGCGGC
GTTGCTATGCCACGTCGTGCGATGGCTCCTTCTGCACGACGCCCGCACGA
GCAAGCTCAGCAGGGCCGCCGACTACGCCGGCCCGGCCCAGGTCGCCACA
TTCGTCTTTCTCTGGTACGGCATCAGCGTCTCGTTCACAATAATCAACCG
CTGGATGTACGTCGACTGGCGGGGCGGCTTCCCCTTCCCCATCCTCACGA
CTGGCGTCCACATGGTCATAAAATACCTCGCATCTCGCGTCGCCGTGTGG
GTGCGCGGCAAGCGGCCCGCGGACCTGCCCCGCGCCGTGTATTGGAGCAT
GGCGGCGCCCATCGGCGTGGCGACGGCCGCCGACGTCCTCTTGAGCAACG
CATCCTTCCTCTTCATCTCGGTCTCCTTCTACACCATTGCCAAGAGCGGC
AGCCTCGTCTGGATCCTGTTGTGGGCCGCCGTCTTCCGGCTGGAGGTGGC
GTCCTGCCGCCTCGTGCTCGTCGTCTCTTTCATCTGCGCTGGCCTCACGC
TGGCATCGTGGGGGGAAACCGACTTCTCATTGCCAGGGCTGCTGATGGTC
TTGGCTTCGAGCTGCGTCGGCGGCTTCCGATGGGCGCTCACGCAGCTGCT
GCAGCGGGTCGACTCAGGCTGCAACGACGCGCTGACGACGGTCTACCACA
TCGCGCCGTCGTCGGCGCTGGCCATGCTGCCTGCGGCGCTCATCCAGCTG
GGGCCGGTGCTGCGCAGCGAGGAGTTCGGCGCGCCGCGGCCACTGGCGGA
GGGTGCACTGCTGATGTTTTGCGGCGGTGAGTGA
back to top