mRNA_P-wetherbeei_contig20780.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A7I8EET8_9CHLR (Hydrolase n=1 Tax=Ktedonobacteria bacterium brp13 TaxID=2717365 RepID=A0A7I8EET8_9CHLR) HSP 1 Score: 55.1 bits (131), Expect = 6.040e-7 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGGQ----AMDSYAQRVWKEDL-GPTGLFNRGDHLGGYDSGHGFQMIDQAGLTQVYALQNWPKDK 225
FN+I+F+NLL + V+ Q AM +YA +VW+ TGLF H G S QMI+QA +TQ+YA+ +W ++
Sbjct: 309 FNSIFFKNLLLLQSVDHNQRYVRAMQNYADQVWQTSRDSATGLF----HFNGSSS---TQMIEQAAMTQIYAVLSWSPEQ 381
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: D6U5Z8_9CHLR (Glycoside hydrolase family 76 n=4 Tax=Ktedonobacter TaxID=363276 RepID=D6U5Z8_9CHLR) HSP 1 Score: 54.7 bits (130), Expect = 8.260e-7 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGGQ----AMDSYAQRVWKEDL-GPTGLFNRGDHLGGYDSGHGFQMIDQAGLTQVYALQNW 213
FN+I+F+NLL + V Q AM +YA R W+ + TGLF H G S QMI+QA +TQ+YA+ +W
Sbjct: 308 FNSIFFKNLLLLQSVNHNQDYVKAMQAYADRAWENNRDAATGLF----HFNGSQS---TQMIEQAAMTQIYAVLSW 376
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A420XTM5_9ACTN (Glycosyl hydrolase family 76 n=1 Tax=Motilibacter peucedani TaxID=598650 RepID=A0A420XTM5_9ACTN) HSP 1 Score: 54.7 bits (130), Expect = 8.290e-7 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGG----QAMDSYAQRVWKEDLGP-TGLFNRGDHLGGYDSGHGFQMIDQAGLTQVYALQNWPK 219
FN+I+F+NLL + V+ +A+ +YA R+W + P TGLF GD G QMI+QA +TQV+A+ W +
Sbjct: 319 FNSIFFKNLLLLSSVKSDSAVREALVAYADRLWTQHRDPATGLFRFGDAAG-------TQMIEQAAVTQVFAVLAWSR 389
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A401ZT25_9CHLR (Hydrolase n=1 Tax=Dictyobacter aurantiacus TaxID=1936993 RepID=A0A401ZT25_9CHLR) HSP 1 Score: 53.9 bits (128), Expect = 1.550e-6 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGG----QAMDSYAQRVWKEDL-GPTGLFNRGDHLGGYDSGHGFQMIDQAGLTQVYALQNW 213
FN+I+F+NLL + V+ +AM SYA +VW+ TGLF H G S QMI+QA +TQ+YA+ +W
Sbjct: 309 FNSIFFKNLLLLQSVDHDTRYVKAMQSYADQVWQTSRDATTGLF----HFGNSSS---TQMIEQAAMTQIYAVLSW 377
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A4P6JLB6_9CHLR (Glycosyl hydrolase n=2 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JLB6_9CHLR) HSP 1 Score: 52.8 bits (125), Expect = 3.990e-6 Identity = 35/81 (43.21%), Postives = 44/81 (54.32%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGGQ----AMDSYAQRVW-KEDLGPTGLFNRGDHLGGYDSGHGF-QMIDQAGLTQVYALQNWPKDK 225
FNAI+F+NLL + V Q AM +YA VW K TGLF +DS QMIDQA +TQ+YA+ WP +
Sbjct: 352 FNAIFFKNLLLLHSVNHNQSYVQAMQTYADTVWSKYRDAATGLFR-------FDSTKPTTQMIDQAAMTQIYAVLCWPPSR 425
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: UPI001BA79E6C (glycosyl hydrolase n=1 Tax=Agromyces salentinus TaxID=269421 RepID=UPI001BA79E6C) HSP 1 Score: 52.4 bits (124), Expect = 5.430e-6 Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGGQ----AMDSYAQRVWKEDLG-PTGLFN-RGDHLGGYDSGHGFQMIDQAGLTQVYALQNW 213
FN+I+F+NLL + GG AM YA RVW E TGLF G+H Q+++QA +TQ+YA+ W
Sbjct: 328 FNSIFFKNLLLLESETGGSTYRTAMQDYADRVWAEQRDRSTGLFVFEGEHT---------QLLEQAAMTQIYAVLAW 395
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A1H2N1F5_9ACTN (Predicted alpha-1,6-mannanase, GH76 family n=1 Tax=Microlunatus sagamiharensis TaxID=546874 RepID=A0A1H2N1F5_9ACTN) HSP 1 Score: 52.0 bits (123), Expect = 7.430e-6 Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGG----QAMDSYAQRVWKEDLGP-TGLFNRGDHLGGYDSGHGF-QMIDQAGLTQVYALQNWPKDK 225
FN+IYF+NLL + G +AM+++A VW+ TGLF L ++ G QMI QA +TQVYA+ WP+ +
Sbjct: 330 FNSIYFKNLLLLDAARGRSTYRKAMEAWADHVWRHQRDDATGLF-----LFDQETAPGTTQMIQQAAMTQVYAVLAWPRSR 405
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Match: A0A1H5XVG2_9ACTN (Glycosyl hydrolase family 76 n=1 Tax=Streptomyces yanglinensis TaxID=310779 RepID=A0A1H5XVG2_9ACTN) HSP 1 Score: 50.1 bits (118), Expect = 3.550e-5 Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 1
Query: 1 FNAIYFRNLLQVPGVEGG----QAMDSYAQRVWKEDLGP-TGLFNRGDHLGGYDSGHGFQMIDQAGLTQVYALQNWPKDK 225
FN+I+F+NLL + V GG +A +YA VW P TGL +D+G Q I QA Q++A+ WP+ K
Sbjct: 328 FNSIFFKNLLLLESVTGGDTYQKATAAYADWVWTSARDPKTGLVR-------FDTGGTTQSIQQAASAQIFAVLAWPRSK 400 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20780.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20780.3.1 >prot_P-wetherbeei_contig20780.3.1 ID=prot_P-wetherbeei_contig20780.3.1|Name=mRNA_P-wetherbeei_contig20780.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp FNAIYFRNLLQVPGVEGGQAMDSYAQRVWKEDLGPTGLFNRGDHLGGYDSback to top mRNA from alignment at P-wetherbeei_contig20780:958..1200- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20780.3.1 ID=mRNA_P-wetherbeei_contig20780.3.1|Name=mRNA_P-wetherbeei_contig20780.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig20780:958..1200- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20780:958..1200- >mRNA_P-wetherbeei_contig20780.3.1 ID=mRNA_P-wetherbeei_contig20780.3.1|Name=mRNA_P-wetherbeei_contig20780.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig20780:958..1200- (Phaeothamnion wetherbeei SAG_119_79)back to top |