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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2648 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 2094 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186208.2804646-UTR-P-wetherbeei_contig2078:2921..3027 | 1683186208.2804646-UTR-P-wetherbeei_contig2078:2921..3027 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig2078 2922..3027 - |
| 1683186208.300818-UTR-P-wetherbeei_contig2078:5121..5221 | 1683186208.300818-UTR-P-wetherbeei_contig2078:5121..5221 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig2078 5122..5221 - |
| 1683186208.3114238-UTR-P-wetherbeei_contig2078:5860..6208 | 1683186208.3114238-UTR-P-wetherbeei_contig2078:5860..6208 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig2078 5861..6208 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186208.2906735-CDS-P-wetherbeei_contig2078:3027..5121 | 1683186208.2906735-CDS-P-wetherbeei_contig2078:3027..5121 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig2078 3028..5121 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2078.2.1 >prot_P-wetherbeei_contig2078.2.1 ID=prot_P-wetherbeei_contig2078.2.1|Name=mRNA_P-wetherbeei_contig2078.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=698bp
MRIVFATSGHTRRGGRRGNAALMAYALGRAISMVTALEWAGSRLGHGGIG
DESHSHSSGGGSSRAGADAEGRHGSGDDGNGGGGDGGRSAAASDGWGFCP
SCGAAASGGTASVAAAAVAAAAGAHARGCELSCVLLDMREALKKSRAPLC
VVPPTAADVGDEVASAESPAGDTASGGASSAGGGRGRGKGRGGVGGRARG
SGSSGSGNRGGGGGGGGGGWSGDSRARAPSFDWEQLPAPAPKVTPLGKRP
RKEEYERDAKIESFGGGGSSGGCGPGKSGGDAMEGNSSRVGSRRGGAGTA
SSGRLPESAVPRRPQQRPSTNPIAVTTALPAWWRSTVAQAAMPAADKQPV
RAPLPLPVAATGPALDTGERAVTYVLHFPPKRLHQGETSGRCGGGGGSCG
GRSSGGGGSGGVAGGSSGGGGGSGSSGSGVGGSSGGGGDGSSGGSGGSSG
GGNGSSGGGDGDGIRQLGEAAAALDGATRVEAAVGAGGSKGEDGEGGNGG
DGGKNDAEDDGGSDHGERSDFGDGGGSKSATAHRADGRIDAAAESAADGE
AVPCVAFDAAGRAIGFYRDRHRPEERRYCLEYAAWPATPDTPLPPDAPAE
RAEAEAELRRRLNRPATHGVFAIRPTDAADGDREGGSGGGGSGSSSGGCG
CGEGGGDRRGQNSRAGEAALAALRDEVLAHLRLTALAPSLPMWPVTP* back to topmRNA from alignment at P-wetherbeei_contig2078:2922..6208- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig2078.2.1 ID=mRNA_P-wetherbeei_contig2078.2.1|Name=mRNA_P-wetherbeei_contig2078.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3287bp|location=Sequence derived from alignment at P-wetherbeei_contig2078:2922..6208- (Phaeothamnion wetherbeei SAG_119_79)
TGTCAGAACCCAAGTGCGGCCGGCGGTGGTCTGGGCAGCTTTAAAACCGA
ACTGCTGCTTCTCCGACCGCCGCTTGAGGATCGTGGCATCCCGCCTATGT
TGTTACCTCGAAAGTTTTTCTGTAAGCAATGACGCTTGGGGAAGCTTCGT
TATTGCACTCTGTTGACAGGTCACCTATACATTCGTGCTGCTGAACGACA
CCGATGGCTCGCCGGTGGTGCCCGCGGAGGTCTTGGAGCCGGAGCTAGGG
CCGGCGACCGTCCACAGCAACTGGCGGGGCCGCGCCACCTTCCGCTTCCG
CATCGCCGGCACCGCCGCGTCGCAGCGCCAGAGCAGCCGCCAGCTCAGGT
CAGAGGGTCTCTGCGGCGCCTGCTTTTTCGCGGCATCCGGCGTTTGGAGA
AAGTTTTGGATGGCCATTTTGGAAATAGAGACTTTTGTATAGCTGCGATG
CCGTTATGGCATTGTTTGCCTTTCAGGGTTTGAGCGACCGATGGGCCCTA
ATCCTTGTCAATTGATTTCGTGAGCCACCGTGGAAATGCCGGTTTGGACC
GCGACACCGTTCTTTTCCGAAGTGTGCTGTTTACGCGAGGTGGCTTGATA
GTCGTTTCCAATCCATTGCCGCAACAGAAAACGGATTGTCGGTGATAGCC
GCCGTGTTAATATGGGAGCCGAATGCGAGCTTGCTTTGTTGGGTCTGTTG
TCGGCTGGCTTAAAGAGGCGTGTCTCTCTCTTTCCTTTCTTCTGTCGTCC
ATTTCTGCCACTTCCAAAAGACACTTAAAATGCGCTCTCAGCAGCCCCGT
TATTTTTTCGCGCGTCGACCTCGTTTAATACAGAATGCCGCCGCGCGCCG
AAGGAAAGATTCTTTCAGGTTCTCCGACCGCCTCTTGCCATGCAAAAGCC
AACAAATTTGCTGTTACTTGGTTATCACTTTACCACAATCCGGTTCTCCT
TTTTCGCGTTCTCTGTTACGGTCGCCGCCTGCCGCAGATTGCAGGCGACG
GCGGGCCCGTACTCCGGCGCGGCCCGCTACGTCCATCGGGCATCTGATGA
GGAGCTGCAAGAAGTCCCGCCGGCGATCTCGCCCCGGATGCGAATCGTCT
TTGCGACGTCTGGCCACACGCGGCGCGGTGGCCGCAGGGGCAACGCGGCG
CTAATGGCATACGCGCTGGGACGCGCCATCAGCATGGTGACGGCCCTTGA
ATGGGCCGGCAGCCGCCTTGGCCACGGTGGCATCGGCGACGAAAGCCACA
GTCACAGCAGCGGCGGCGGCAGCAGTCGTGCCGGCGCTGACGCTGAAGGC
CGCCACGGATCAGGCGACGATGGTAATGGAGGCGGCGGCGACGGCGGTCG
CAGCGCTGCTGCTTCTGATGGATGGGGTTTCTGTCCGTCATGCGGTGCCG
CGGCGTCTGGCGGCACGGCATCTGTGGCGGCAGCAGCAGTGGCGGCGGCC
GCTGGGGCGCATGCCCGTGGCTGTGAGCTGTCGTGTGTGCTCTTGGACAT
GCGAGAGGCCCTTAAAAAATCGAGAGCTCCGTTATGCGTAGTTCCCCCAA
CCGCTGCCGACGTCGGAGATGAAGTTGCTTCGGCAGAATCGCCCGCCGGC
GACACTGCCAGCGGCGGCGCTAGCAGCGCTGGCGGTGGCCGTGGCCGTGG
CAAGGGCCGCGGCGGAGTCGGTGGTAGGGCGCGTGGCAGTGGCAGCAGCG
GGAGCGGCAACCGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTGGAGC
GGCGACAGTAGAGCAAGGGCACCCTCATTCGACTGGGAGCAGTTGCCCGC
GCCGGCGCCAAAAGTCACACCGCTCGGAAAGCGGCCACGGAAGGAGGAAT
ACGAACGTGACGCAAAAATAGAGTCATTCGGGGGGGGCGGCAGCAGCGGC
GGGTGCGGTCCTGGCAAAAGCGGGGGCGATGCAATGGAAGGCAACAGCAG
CCGCGTGGGGTCCAGGCGTGGCGGAGCGGGCACCGCCAGCTCCGGGAGGC
TTCCCGAGTCGGCGGTGCCACGGCGTCCCCAACAGCGCCCCAGCACCAAC
CCAATTGCGGTCACAACGGCGCTGCCGGCGTGGTGGCGCAGCACCGTGGC
ACAGGCGGCCATGCCAGCGGCAGACAAGCAACCCGTCCGGGCCCCGCTCC
CGCTGCCAGTGGCAGCGACCGGACCAGCCCTTGATACGGGAGAGCGAGCC
GTCACCTACGTGCTGCACTTCCCGCCGAAACGGTTGCATCAAGGTGAAAC
GAGTGGCAGGTGTGGCGGCGGCGGTGGCAGTTGCGGTGGCAGAAGCAGCG
GTGGCGGTGGCAGCGGCGGCGTGGCCGGCGGCAGCAGCGGTGGCGGCGGC
GGCAGCGGCAGCAGCGGCAGCGGCGTTGGCGGTAGCAGCGGCGGCGGGGG
CGATGGCAGTAGCGGCGGCAGTGGTGGCAGCAGCGGCGGCGGCAACGGCA
GCAGCGGCGGCGGCGACGGCGACGGAATTAGACAGCTGGGCGAAGCGGCC
GCAGCCCTCGATGGTGCAACCCGGGTTGAAGCGGCAGTGGGGGCCGGCGG
CAGTAAAGGAGAGGACGGTGAAGGTGGCAACGGCGGCGACGGCGGGAAGA
ATGACGCAGAAGACGACGGCGGCAGCGACCATGGCGAACGAAGCGACTTT
GGGGACGGCGGCGGCAGCAAGAGCGCGACGGCTCATCGGGCCGACGGACG
CATCGATGCTGCTGCCGAAAGTGCCGCCGATGGCGAGGCAGTGCCGTGTG
TGGCCTTTGACGCGGCCGGCCGCGCCATCGGCTTTTATCGGGACCGTCAC
CGTCCGGAGGAGCGCCGCTACTGCTTAGAGTACGCGGCGTGGCCGGCGAC
GCCGGACACGCCGCTGCCGCCGGACGCGCCGGCTGAAAGGGCGGAGGCGG
AGGCGGAGCTGCGCCGGCGCCTGAACAGACCTGCGACGCACGGCGTCTTC
GCCATACGTCCCACAGACGCCGCGGACGGCGATAGAGAAGGCGGCAGCGG
AGGTGGCGGCAGCGGCAGCAGCAGCGGGGGATGCGGCTGCGGCGAGGGAG
GCGGCGATCGCCGTGGACAAAATAGTAGGGCTGGTGAGGCGGCGCTGGCC
GCGCTTAGAGACGAAGTTTTGGCACACTTGCGCTTAACGGCTCTGGCCCC
CAGCCTCCCAATGTGGCCGGTGACCCCGTAAGAGCATCGAAGCCTACAGA
ATAGTGAGGAGGAAGAAGAAACGGTGGAGAGACGATTTCTACCCGCTCGT
GTCCACACAATTAAATTGCATCAAAAGTTTTGACCCC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig2078:2922..6208- >mRNA_P-wetherbeei_contig2078.2.1 ID=mRNA_P-wetherbeei_contig2078.2.1|Name=mRNA_P-wetherbeei_contig2078.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2094bp|location=Sequence derived from alignment at P-wetherbeei_contig2078:2922..6208- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAATCGTCTTTGCGACGTCTGGCCACACGCGGCGCGGTGGCCGCAG
GGGCAACGCGGCGCTAATGGCATACGCGCTGGGACGCGCCATCAGCATGG
TGACGGCCCTTGAATGGGCCGGCAGCCGCCTTGGCCACGGTGGCATCGGC
GACGAAAGCCACAGTCACAGCAGCGGCGGCGGCAGCAGTCGTGCCGGCGC
TGACGCTGAAGGCCGCCACGGATCAGGCGACGATGGTAATGGAGGCGGCG
GCGACGGCGGTCGCAGCGCTGCTGCTTCTGATGGATGGGGTTTCTGTCCG
TCATGCGGTGCCGCGGCGTCTGGCGGCACGGCATCTGTGGCGGCAGCAGC
AGTGGCGGCGGCCGCTGGGGCGCATGCCCGTGGCTGTGAGCTGTCGTGTG
TGCTCTTGGACATGCGAGAGGCCCTTAAAAAATCGAGAGCTCCGTTATGC
GTAGTTCCCCCAACCGCTGCCGACGTCGGAGATGAAGTTGCTTCGGCAGA
ATCGCCCGCCGGCGACACTGCCAGCGGCGGCGCTAGCAGCGCTGGCGGTG
GCCGTGGCCGTGGCAAGGGCCGCGGCGGAGTCGGTGGTAGGGCGCGTGGC
AGTGGCAGCAGCGGGAGCGGCAACCGTGGTGGCGGCGGCGGCGGCGGCGG
CGGCGGCTGGAGCGGCGACAGTAGAGCAAGGGCACCCTCATTCGACTGGG
AGCAGTTGCCCGCGCCGGCGCCAAAAGTCACACCGCTCGGAAAGCGGCCA
CGGAAGGAGGAATACGAACGTGACGCAAAAATAGAGTCATTCGGGGGGGG
CGGCAGCAGCGGCGGGTGCGGTCCTGGCAAAAGCGGGGGCGATGCAATGG
AAGGCAACAGCAGCCGCGTGGGGTCCAGGCGTGGCGGAGCGGGCACCGCC
AGCTCCGGGAGGCTTCCCGAGTCGGCGGTGCCACGGCGTCCCCAACAGCG
CCCCAGCACCAACCCAATTGCGGTCACAACGGCGCTGCCGGCGTGGTGGC
GCAGCACCGTGGCACAGGCGGCCATGCCAGCGGCAGACAAGCAACCCGTC
CGGGCCCCGCTCCCGCTGCCAGTGGCAGCGACCGGACCAGCCCTTGATAC
GGGAGAGCGAGCCGTCACCTACGTGCTGCACTTCCCGCCGAAACGGTTGC
ATCAAGGTGAAACGAGTGGCAGGTGTGGCGGCGGCGGTGGCAGTTGCGGT
GGCAGAAGCAGCGGTGGCGGTGGCAGCGGCGGCGTGGCCGGCGGCAGCAG
CGGTGGCGGCGGCGGCAGCGGCAGCAGCGGCAGCGGCGTTGGCGGTAGCA
GCGGCGGCGGGGGCGATGGCAGTAGCGGCGGCAGTGGTGGCAGCAGCGGC
GGCGGCAACGGCAGCAGCGGCGGCGGCGACGGCGACGGAATTAGACAGCT
GGGCGAAGCGGCCGCAGCCCTCGATGGTGCAACCCGGGTTGAAGCGGCAG
TGGGGGCCGGCGGCAGTAAAGGAGAGGACGGTGAAGGTGGCAACGGCGGC
GACGGCGGGAAGAATGACGCAGAAGACGACGGCGGCAGCGACCATGGCGA
ACGAAGCGACTTTGGGGACGGCGGCGGCAGCAAGAGCGCGACGGCTCATC
GGGCCGACGGACGCATCGATGCTGCTGCCGAAAGTGCCGCCGATGGCGAG
GCAGTGCCGTGTGTGGCCTTTGACGCGGCCGGCCGCGCCATCGGCTTTTA
TCGGGACCGTCACCGTCCGGAGGAGCGCCGCTACTGCTTAGAGTACGCGG
CGTGGCCGGCGACGCCGGACACGCCGCTGCCGCCGGACGCGCCGGCTGAA
AGGGCGGAGGCGGAGGCGGAGCTGCGCCGGCGCCTGAACAGACCTGCGAC
GCACGGCGTCTTCGCCATACGTCCCACAGACGCCGCGGACGGCGATAGAG
AAGGCGGCAGCGGAGGTGGCGGCAGCGGCAGCAGCAGCGGGGGATGCGGC
TGCGGCGAGGGAGGCGGCGATCGCCGTGGACAAAATAGTAGGGCTGGTGA
GGCGGCGCTGGCCGCGCTTAGAGACGAAGTTTTGGCACACTTGCGCTTAA
CGGCTCTGGCCCCCAGCCTCCCAATGTGGCCGGTGACCCCGTAA back to top
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