mRNA_P-wetherbeei_contig20742.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20742.1.1
Unique NamemRNA_P-wetherbeei_contig20742.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A7C2REG5_9HYPH (Epoxyalkane--coenzyme M transferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2REG5_9HYPH)

HSP 1 Score: 613 bits (1581), Expect = 1.510e-219
Identity = 298/369 (80.76%), Postives = 330/369 (89.43%), Query Frame = 1
Query:    1 MKSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            ++ST+RFLTTHTGSLPRPDDL+RMMYAKEEGVPV+   LA+RVRAAV EVV +Q+ AGIDLVNDGEMSKPSYATY+KDRL GFGG+GNTFVYQDLAAFP+L +RVFGDPGRSRR+TPACN  I VRD  AA  DV+NL AA+     AG F++AASPGVVSLFFRN+HY   + YLEAIAEAMRQEYET+ + G  LQIDCPDLGMGRHIQYADL L EFRKRA  H+E L+HALRN+PA++LR+HLCWGNYEGPHHCDV LAD+ DIV+ AKPAAISLEAANPRHAHEW LFERVKLP+GKVLIPGVIESKSNFIEHPEL+AQRIGRYANLVGRENVIAGSDCG+GTWVGQAAVDPDVVWAKLAAMAE
Sbjct:    2 IRSTERFLTTHTGSLPRPDDLVRMMYAKEEGVPVDAAQLALRVRAAVAEVVRKQVEAGIDLVNDGEMSKPSYATYVKDRLSGFGGSGNTFVYQDLAAFPRLEKRVFGDPGRSRRRTPACNGAIGVRDPAAARADVDNLKAAVAGARVAGTFMSAASPGVVSLFFRNEHYKDQDAYLEAIAEAMRQEYETVASGGITLQIDCPDLGMGRHIQYADLPLPEFRKRAHRHVEVLNHALRNIPAEQLRLHLCWGNYEGPHHCDVPLADVIDIVLLAKPAAISLEAANPRHAHEWALFERVKLPEGKVLIPGVIESKSNFIEHPELVAQRIGRYANLVGRENVIAGSDCGYGTWVGQAAVDPDVVWAKLAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A536XDJ5_9PROT (Cobalamin-independent methionine synthase II family protein n=2 Tax=Betaproteobacteria TaxID=28216 RepID=A0A536XDJ5_9PROT)

HSP 1 Score: 602 bits (1552), Expect = 4.080e-215
Identity = 293/368 (79.62%), Postives = 327/368 (88.86%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +ST RFLTTHTGSLPRPDDLIRMMYAK+EGVPV+  AL+ RV AAVGEVV +Q AAGID++NDGEMSKPSYATY+ DRLDGFGGTGNTFVYQDLA FP LA+RVFGDPGRSRRKTPACNAPI VRD EAA  DVE+L AAL        FLTAASPGV+SLFFRN+HYP+ E YL AIAEAMRQEYETI  AG  LQIDCPDLGMGRHIQYADLSL E+RK+AA+H+EAL+HA+ N+  +++RMHLCWGNYEGPHHCDV L D+ DIV +A+P+AI+LEAANPRHAHEW++FE  KLP+GK+LIPGVIESKSNFIEHPEL+AQRIGRYA LVGRENVIAGSDCGFGTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RSTDRFLTTHTGSLPRPDDLIRMMYAKQEGVPVDAAALSRRVAAAVGEVVRKQAAAGIDVINDGEMSKPSYATYVTDRLDGFGGTGNTFVYQDLAEFPNLAKRVFGDPGRSRRKTPACNAPIRVRDPEAARTDVEHLKAALASFEAREAFLTAASPGVISLFFRNEHYPTDEAYLSAIAEAMRQEYETIANAGIVLQIDCPDLGMGRHIQYADLSLGEWRKKAALHVEALNHAVANISPEQMRMHLCWGNYEGPHHCDVPLDDVIDIVFRARPSAIALEAANPRHAHEWKVFETRKLPEGKILIPGVIESKSNFIEHPELVAQRIGRYARLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKMAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A127EPJ3_9HYPH (Methionine synthase, vitamin-B12 independent n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EPJ3_9HYPH)

HSP 1 Score: 595 bits (1535), Expect = 1.520e-212
Identity = 293/368 (79.62%), Postives = 322/368 (87.50%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +S++RFLTTHTGSLPRPDDLIRMMYAKEEGVPV+PQALA RVR+AV EVV +Q  AG+DL+NDGE+SKPSYATYIKDRL+GFGGTGNTFVYQDLA FPKLAQ+VFGDPGRSRRKTPACNAPI+VRDA AA  DV+NL AAL+    A GF++AASPGVVSLFFRNDHY   + YLEAIAEAMR EYE +  AG  LQIDCPDLGMGRHIQYADL L+ FR R   HI AL+HA RN+  +++R+HLCWGNYEGPHH DV LAD+ DIV  A+P AISLEAANPRHAHE+ LFE VKLP GKVLIPGVIESKSNFIEHPELIAQRIGRYA  VGRENVIAGSDCG+GTWVGQAAVDPDVVWAKLAAMAE
Sbjct:    3 RSSERFLTTHTGSLPRPDDLIRMMYAKEEGVPVDPQALAARVRSAVAEVVQKQADAGVDLINDGELSKPSYATYIKDRLNGFGGTGNTFVYQDLAEFPKLAQKVFGDPGRSRRKTPACNAPISVRDAAAARTDVDNLKAALSGAKAAEGFMSAASPGVVSLFFRNDHYKDQDAYLEAIAEAMRDEYEAVAKAGLTLQIDCPDLGMGRHIQYADLDLKAFRSRIGAHIAALNHATRNIAPEQMRLHLCWGNYEGPHHRDVPLADVIDIVFTARPHAISLEAANPRHAHEYTLFETVKLPAGKVLIPGVIESKSNFIEHPELIAQRIGRYAERVGRENVIAGSDCGYGTWVGQAAVDPDVVWAKLAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A536ZUH4_9PROT (Cobalamin-independent methionine synthase II family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZUH4_9PROT)

HSP 1 Score: 593 bits (1529), Expect = 1.450e-211
Identity = 290/368 (78.80%), Postives = 323/368 (87.77%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +ST+RFLTTHTGSLPRPDDLIRMMYAKEEGVPV+P ALA RV +AV EVV +Q  AG+D+V+DGEMSKPSYATYIKDRL GFGG+GNTFVYQDL  FP LA+RVFGDPGRSRRKTPACNAPI+VRDA AA  D  NL AA         FLTAASPGVVSLFFR++HY + E YL AIAEAMR EYETI  AG  LQIDCPDLGMGRHIQ+ADLSL EFRK+A +H+EAL+HAL N+P+DRLR+H+CWGNYEGPHHCDV LAD+ DIV++A+P AI LEAANPRHAHEW +FE VKLP+GK+LIPGVIESKSNFIEHPEL+AQRI RYANLVGRENVIAGSDCG+GTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RSTERFLTTHTGSLPRPDDLIRMMYAKEEGVPVDPDALARRVASAVEEVVRKQADAGVDVVDDGEMSKPSYATYIKDRLHGFGGSGNTFVYQDLVDFPNLAKRVFGDPGRSRRKTPACNAPISVRDAGAAKADAANLNAAFAKVDAQEAFLTAASPGVVSLFFRDEHYGNEEAYLGAIAEAMRYEYETIANAGIVLQIDCPDLGMGRHIQFADLSLAEFRKKAELHVEALNHALANIPSDRLRLHMCWGNYEGPHHCDVPLADVIDIVLRARPMAIVLEAANPRHAHEWRVFETVKLPEGKILIPGVIESKSNFIEHPELVAQRINRYANLVGRENVIAGSDCGYGTWVGQAAVDPDVVWAKMAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A536VYM2_9PROT (Cobalamin-independent methionine synthase II family protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VYM2_9PROT)

HSP 1 Score: 593 bits (1528), Expect = 1.770e-211
Identity = 286/368 (77.72%), Postives = 327/368 (88.86%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +ST+RFLTTHTGSLPRP+DLIRMMYA+EEGVPV+P AL+ RV +AV EVV +Q  AG+D+VNDGEM+KPSYATYIKDRL GFGGTGNTFVYQDL AFP LA+RVFGDPGRSRRKTPACNA I VRD +AA  DV++L AA  +      FLTAASPGVVSLFFRN+HYPS E Y+ AIA+AMR EYETI  AG  LQIDCPDLGMGRHIQYA+L+L E+R +A +H+EAL+HA+ N+P +RLRMHLCWGNYEGPHHCDVALAD+ DIV +A+P+AI++EA+NPRHAHEW LFE+VKLPDGK+LIPGVIESKSNFIEHPEL+AQRIGRYA LVGRENV+AGSDCGFGTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RSTERFLTTHTGSLPRPEDLIRMMYAREEGVPVDPVALSKRVASAVEEVVRKQAEAGVDVVNDGEMTKPSYATYIKDRLSGFGGTGNTFVYQDLVAFPNLAKRVFGDPGRSRRKTPACNAAIGVRDPQAAKTDVDHLQAAFDNVKAQEMFLTAASPGVVSLFFRNEHYPSEEAYIFAIADAMRHEYETIAGAGIVLQIDCPDLGMGRHIQYANLNLAEWRMKAQLHVEALNHAVANIPPERLRMHLCWGNYEGPHHCDVALADVIDIVFRARPSAIAIEASNPRHAHEWTLFEKVKLPDGKMLIPGVIESKSNFIEHPELVAQRIGRYAKLVGRENVMAGSDCGFGTWVGQAAVDPDVVWAKMAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A537NNS6_9PROT (Cobalamin-independent methionine synthase II family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NNS6_9PROT)

HSP 1 Score: 590 bits (1521), Expect = 2.060e-210
Identity = 288/369 (78.05%), Postives = 321/369 (86.99%), Query Frame = 1
Query:    1 MKSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            ++ST+RFLTTHTGSLPR  +L+R+MYAKEEGVPV+P ALA +VRAAV EVV +Q  AGID+VNDGEMSKPSYATY+KDRLDGFGG+GN+FVYQDL  FPKLA RVFGDPGRSRRKTPACN PI VRD  A  +DV+NL  AL       GF++AASPG+VSLFFRNDHYPS E YL AIA+AMR+EYETI A+   LQIDCPDL MGRHIQYA L+L EFRKRAA+HIEAL+HALRN+  +RLRMHLCWGNYEGPHHCDV LADI D+V  A+P+AIS EAANPRH HEW LFERVKLP GK+LIPGVIESKSNFIEHPEL+AQR+GRYA LVGRENVIAGSDCG+GTWVGQAAVDPDVVWAKLAAM E
Sbjct:    2 IRSTERFLTTHTGSLPRFPELVRVMYAKEEGVPVDPTALAQQVRAAVAEVVRKQTEAGIDVVNDGEMSKPSYATYVKDRLDGFGGSGNSFVYQDLEQFPKLAARVFGDPGRSRRKTPACNGPIRVRDGNAVKIDVDNLKMALAAAGSPSGFMSAASPGLVSLFFRNDHYPSQEAYLFAIADAMREEYETIAASDLMLQIDCPDLAMGRHIQYAALTLPEFRKRAAMHIEALNHALRNIAPERLRMHLCWGNYEGPHHCDVPLADIIDLVFSARPSAISFEAANPRHGHEWTLFERVKLPAGKLLIPGVIESKSNFIEHPELVAQRLGRYAKLVGRENVIAGSDCGYGTWVGQAAVDPDVVWAKLAAMTE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A346A1W0_9HYPH (Epoxyalkane--coenzyme M transferase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A1W0_9HYPH)

HSP 1 Score: 588 bits (1516), Expect = 1.190e-209
Identity = 286/368 (77.72%), Postives = 326/368 (88.59%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +ST RFLTTHTGSLPRPDDLIR+MYAKEEGVPVE  ALA+ ++AAV  VV +Q A+G+DL+NDGEMSKPSYATYIKDRL+GFGGTGNTF+YQD+  FP+L Q+VFGDPGRSRRKTPACN PI+VRD  +   D ENL AAL++    GGF++AASPGVVSLFFRND+Y   E+Y+ AIA+AMR+EYETI  AGF +QIDCPDL MGRHIQYADL L  FRKRA +HIEAL+HA+ N+PA++LRMHLCWGNYEGPHH DVALADI D+V KAKP AISLEAANPRHAHE+ +FE VKLPDGKVLIPGVIESKSNFIEHPE++AQRIGRYANLVGRENVIAGSDCG+GTWVGQAAVDPDVV++KLAAMAE
Sbjct:    3 RSTDRFLTTHTGSLPRPDDLIRIMYAKEEGVPVESAALALEIKAAVAGVVKKQAASGVDLINDGEMSKPSYATYIKDRLNGFGGTGNTFIYQDVHEFPRLEQKVFGDPGRSRRKTPACNGPISVRDRVSPKSDAENLKAALSEVKAVGGFMSAASPGVVSLFFRNDYYKDFESYIYAIADAMREEYETIAEAGFVVQIDCPDLAMGRHIQYADLDLAGFRKRAQLHIEALNHAVANIPAEQLRMHLCWGNYEGPHHYDVALADIIDVVFKAKPVAISLEAANPRHAHEYTVFETVKLPDGKVLIPGVIESKSNFIEHPEVVAQRIGRYANLVGRENVIAGSDCGYGTWVGQAAVDPDVVFSKLAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A536TLU7_9PROT (Cobalamin-independent methionine synthase II family protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TLU7_9PROT)

HSP 1 Score: 586 bits (1510), Expect = 1.010e-208
Identity = 283/368 (76.90%), Postives = 322/368 (87.50%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +S++RFLTTHTGSLPRP+DLIRMMYAKEEGVPV+  ALA RV +AV EVV  Q  AGID++NDGEMSKPSYATYIKDRL GFGG GNTFVYQDL  FP LA+RVFGDPGRSRRKTPACN  I VRD +AA  DV++L AA         F+TAASPGVVSLFFRN+HYPS ETYL AIAEAMR EYETI  AG  LQIDCPDLGMGRHIQYADLSL ++RK+A +H+EAL+HAL N+P +++RMHLCWGNYEGPHHCDV L+D+ DIV +A+P+AI++EA+NPRHAHEW LFE++KLP+GK+LIPGVIESKSNFIEHPELIAQRIGRYA LVGRENV+AGSDCG+GTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RSSERFLTTHTGSLPRPEDLIRMMYAKEEGVPVDAAALAERVASAVEEVVRNQAQAGIDVINDGEMSKPSYATYIKDRLSGFGGAGNTFVYQDLVEFPTLAKRVFGDPGRSRRKTPACNTAIGVRDRQAAQADVDHLQAAFAKVKAEEAFMTAASPGVVSLFFRNEHYPSEETYLFAIAEAMRHEYETIAKAGIILQIDCPDLGMGRHIQYADLSLADWRKKAQLHVEALNHALANIPPEQVRMHLCWGNYEGPHHCDVPLSDVIDIVFRARPSAIAIEASNPRHAHEWALFEKIKLPEGKLLIPGVIESKSNFIEHPELIAQRIGRYAKLVGRENVMAGSDCGYGTWVGQAAVDPDVVWAKMAAMAE 370          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A6L5FHR5_9HYPH (Epoxyalkane--coenzyme M transferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FHR5_9HYPH)

HSP 1 Score: 585 bits (1509), Expect = 1.200e-208
Identity = 288/364 (79.12%), Postives = 314/364 (86.26%), Query Frame = 1
Query:   16 RFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            RFLTTHTGSLPRPDDLIRMMYA+EEGVPVE  ALA  VRAAV E V +Q  +G+DLVNDGEMSKPSYATY+KDRL GFGGTGNTFVY+DL  FP L +RVFGDPGRSRRKTPACN PI+VRD +A   DV+NL AAL D    G F++AASPGVVSLFFRND+YP  E YL AIAEAMR EYET+ AA   LQIDCPDLGMGRHIQYADLSL EFRKRA  H+EAL+HA+ N+P +++R+HLCWGNYEGPHH DVALADI DIV  A+P+ +S EAANPRHAHEW LFE V LPDGKVLIPGVIESKSNFIEHPELIAQRI RYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RFLTTHTGSLPRPDDLIRMMYAREEGVPVERTALATWVRAAVAETVRKQADSGVDLVNDGEMSKPSYATYVKDRLAGFGGTGNTFVYRDLVDFPNLGKRVFGDPGRSRRKTPACNGPISVRDPQAVAGDVDNLKAALGDVNVTGAFMSAASPGVVSLFFRNDYYPGQEAYLHAIAEAMRHEYETVAAADIVLQIDCPDLGMGRHIQYADLSLDEFRKRAREHVEALNHAVANIPPEQMRLHLCWGNYEGPHHYDVALADIIDIVFLARPSGLSFEAANPRHAHEWALFEAVNLPDGKVLIPGVIESKSNFIEHPELIAQRITRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKMAAMAE 366          
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Match: A0A536SQ78_9PROT (Cobalamin-independent methionine synthase II family protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SQ78_9PROT)

HSP 1 Score: 585 bits (1507), Expect = 2.900e-208
Identity = 284/368 (77.17%), Postives = 317/368 (86.14%), Query Frame = 1
Query:    4 KSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEVVDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPKLAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGGFLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQIDCPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWGNYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPDGKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWVGQAAVDPDVVWAKLAAMAE 1107
            +S  RFLTTHTGSLPRP+DL+RMMYAKEEGVPV+  ALA R+R+AV EVV +Q AAG+D+VNDGEMSKPSYATY+KDRL+GFGG GNTFVYQDL  FP LA+RVFGDPGRSRRKTP CNAPI+VRD EAA  DV+NL A          F++AASPGV+ LFFRNDHYPS E YL AIAEAMRQEYET+  AG  LQIDCPDL MGRHIQYA LSL EFRK+A +HIEAL+HAL NVP +RLRMHLCWGNYEGPHHCDV L  I D+V  A+P+ IS EAANPRHAHEW++FE VKLP+GKVLIPGV+ESK+NFIEHPEL+AQRIGRYA LVGRENVIAGSDCG+GTWVGQAAVDPDVVWAK+AAMAE
Sbjct:    3 RSAGRFLTTHTGSLPRPEDLVRMMYAKEEGVPVDRAALAARIRSAVEEVVHKQAAAGVDVVNDGEMSKPSYATYVKDRLNGFGGAGNTFVYQDLVEFPNLARRVFGDPGRSRRKTPGCNAPISVRDPEAARHDVDNLKAGFGRVKAQEMFMSAASPGVIGLFFRNDHYPSQEAYLFAIAEAMRQEYETVAKAGIILQIDCPDLAMGRHIQYAGLSLDEFRKKARLHIEALNHALANVPPERLRMHLCWGNYEGPHHCDVPLEQIIDLVFLARPSGISFEAANPRHAHEWKVFEAVKLPEGKVLIPGVLESKTNFIEHPELVAQRIGRYARLVGRENVIAGSDCGYGTWVGQAAVDPDVVWAKMAAMAE 370          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20742.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2REG5_9HYPH1.510e-21980.76Epoxyalkane--coenzyme M transferase n=1 Tax=Hyphom... [more]
A0A536XDJ5_9PROT4.080e-21579.62Cobalamin-independent methionine synthase II famil... [more]
A0A127EPJ3_9HYPH1.520e-21279.62Methionine synthase, vitamin-B12 independent n=1 T... [more]
A0A536ZUH4_9PROT1.450e-21178.80Cobalamin-independent methionine synthase II famil... [more]
A0A536VYM2_9PROT1.770e-21177.72Cobalamin-independent methionine synthase II famil... [more]
A0A537NNS6_9PROT2.060e-21078.05Cobalamin-independent methionine synthase II famil... [more]
A0A346A1W0_9HYPH1.190e-20977.72Epoxyalkane--coenzyme M transferase n=1 Tax=Pseudo... [more]
A0A536TLU7_9PROT1.010e-20876.90Cobalamin-independent methionine synthase II famil... [more]
A0A6L5FHR5_9HYPH1.200e-20879.12Epoxyalkane--coenzyme M transferase n=1 Tax=Hyphom... [more]
A0A536SQ78_9PROT2.900e-20877.17Cobalamin-independent methionine synthase II famil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20742contigP-wetherbeei_contig20742:99..1205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1248916.ANFY01000007_gene2486
PFAMsMeth_synt_2
Model size1107
Max annot lvl204457|Sphingomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.11e-162
EggNOG OGsCOG0620@1|root,COG0620@2|Bacteria,1MUI9@1224|Proteobacteria,2TTWK@28211|Alphaproteobacteria,2K0DU@204457|Sphingomonadales
DescriptionMethionine synthase
Cds size1107
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186207.6006303-CDS-P-wetherbeei_contig20742:98..12051683186207.6006303-CDS-P-wetherbeei_contig20742:98..1205Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20742 99..1205 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20742.1.1prot_P-wetherbeei_contig20742.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20742 99..1205 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20742.1.1

>prot_P-wetherbeei_contig20742.1.1 ID=prot_P-wetherbeei_contig20742.1.1|Name=mRNA_P-wetherbeei_contig20742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=369bp
MKSTKRFLTTHTGSLPRPDDLIRMMYAKEEGVPVEPQALAVRVRAAVGEV
VDRQIAAGIDLVNDGEMSKPSYATYIKDRLDGFGGTGNTFVYQDLAAFPK
LAQRVFGDPGRSRRKTPACNAPIAVRDAEAAIVDVENLAAALTDKPDAGG
FLTAASPGVVSLFFRNDHYPSHETYLEAIAEAMRQEYETITAAGFDLQID
CPDLGMGRHIQYADLSLQEFRKRAAIHIEALDHALRNVPADRLRMHLCWG
NYEGPHHCDVALADIFDIVVKAKPAAISLEAANPRHAHEWELFERVKLPD
GKVLIPGVIESKSNFIEHPELIAQRIGRYANLVGRENVIAGSDCGFGTWV
GQAAVDPDVVWAKLAAMAE
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mRNA from alignment at P-wetherbeei_contig20742:99..1205+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20742.1.1 ID=mRNA_P-wetherbeei_contig20742.1.1|Name=mRNA_P-wetherbeei_contig20742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1107bp|location=Sequence derived from alignment at P-wetherbeei_contig20742:99..1205+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAGCACCAAGCGGTTCCTGACGACGCACACCGGCAGCCTGCCGCG CCCGGACGATCTGATCCGCATGATGTACGCCAAGGAGGAAGGCGTCCCGG TCGAACCGCAGGCGCTGGCGGTGCGTGTGCGTGCAGCCGTCGGCGAGGTC GTCGATAGGCAGATCGCGGCGGGGATCGATCTCGTCAACGACGGGGAGAT GTCGAAGCCGAGCTATGCGACCTACATCAAGGACCGGCTCGACGGCTTCG GCGGCACCGGAAATACCTTCGTCTACCAGGATCTCGCGGCCTTCCCCAAG CTCGCGCAGCGCGTGTTCGGCGATCCCGGCCGGTCCCGGCGCAAGACGCC GGCCTGCAACGCGCCGATTGCCGTGCGCGACGCGGAAGCCGCGATCGTCG ATGTCGAGAACCTCGCAGCCGCACTCACGGACAAGCCGGACGCGGGCGGC TTCCTGACAGCCGCCTCGCCCGGCGTCGTGTCGCTGTTCTTCCGCAACGA TCACTACCCCAGTCACGAGACCTATCTCGAAGCCATCGCCGAAGCGATGC GGCAGGAATACGAGACCATCACGGCCGCCGGCTTCGACCTTCAGATCGAC TGTCCCGATCTCGGCATGGGCCGGCATATCCAGTATGCCGACCTGAGCCT GCAGGAGTTCCGCAAGCGTGCCGCAATCCACATCGAAGCGCTCGATCACG CGCTGCGCAATGTCCCCGCGGACCGGCTGCGGATGCACCTGTGCTGGGGC AACTACGAGGGCCCCCACCACTGCGACGTCGCGCTGGCCGACATCTTCGA CATCGTCGTCAAGGCCAAGCCGGCAGCGATCTCACTGGAAGCGGCGAACC CCCGGCACGCGCACGAATGGGAGCTGTTCGAGCGCGTCAAACTTCCGGAC GGCAAGGTGCTCATTCCCGGCGTCATCGAGTCGAAGTCGAACTTCATCGA GCACCCCGAGCTGATCGCGCAGCGCATCGGGCGCTACGCGAACCTCGTCG GCCGCGAGAACGTGATCGCCGGCAGCGACTGCGGGTTCGGCACCTGGGTC GGCCAGGCCGCCGTCGATCCCGACGTGGTCTGGGCGAAGCTCGCGGCGAT GGCGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20742:99..1205+

>mRNA_P-wetherbeei_contig20742.1.1 ID=mRNA_P-wetherbeei_contig20742.1.1|Name=mRNA_P-wetherbeei_contig20742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1107bp|location=Sequence derived from alignment at P-wetherbeei_contig20742:99..1205+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAGCACCAAGCGGTTCCTGACGACGCACACCGGCAGCCTGCCGCG
CCCGGACGATCTGATCCGCATGATGTACGCCAAGGAGGAAGGCGTCCCGG
TCGAACCGCAGGCGCTGGCGGTGCGTGTGCGTGCAGCCGTCGGCGAGGTC
GTCGATAGGCAGATCGCGGCGGGGATCGATCTCGTCAACGACGGGGAGAT
GTCGAAGCCGAGCTATGCGACCTACATCAAGGACCGGCTCGACGGCTTCG
GCGGCACCGGAAATACCTTCGTCTACCAGGATCTCGCGGCCTTCCCCAAG
CTCGCGCAGCGCGTGTTCGGCGATCCCGGCCGGTCCCGGCGCAAGACGCC
GGCCTGCAACGCGCCGATTGCCGTGCGCGACGCGGAAGCCGCGATCGTCG
ATGTCGAGAACCTCGCAGCCGCACTCACGGACAAGCCGGACGCGGGCGGC
TTCCTGACAGCCGCCTCGCCCGGCGTCGTGTCGCTGTTCTTCCGCAACGA
TCACTACCCCAGTCACGAGACCTATCTCGAAGCCATCGCCGAAGCGATGC
GGCAGGAATACGAGACCATCACGGCCGCCGGCTTCGACCTTCAGATCGAC
TGTCCCGATCTCGGCATGGGCCGGCATATCCAGTATGCCGACCTGAGCCT
GCAGGAGTTCCGCAAGCGTGCCGCAATCCACATCGAAGCGCTCGATCACG
CGCTGCGCAATGTCCCCGCGGACCGGCTGCGGATGCACCTGTGCTGGGGC
AACTACGAGGGCCCCCACCACTGCGACGTCGCGCTGGCCGACATCTTCGA
CATCGTCGTCAAGGCCAAGCCGGCAGCGATCTCACTGGAAGCGGCGAACC
CCCGGCACGCGCACGAATGGGAGCTGTTCGAGCGCGTCAAACTTCCGGAC
GGCAAGGTGCTCATTCCCGGCGTCATCGAGTCGAAGTCGAACTTCATCGA
GCACCCCGAGCTGATCGCGCAGCGCATCGGGCGCTACGCGAACCTCGTCG
GCCGCGAGAACGTGATCGCCGGCAGCGACTGCGGGTTCGGCACCTGGGTC
GGCCAGGCCGCCGTCGATCCCGACGTGGTCTGGGCGAAGCTCGCGGCGAT
GGCGGAA
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