mRNA_P-wetherbeei_contig20722.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20722.1.1
Unique NamemRNA_P-wetherbeei_contig20722.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A120MG70_9BRAD (Flagellar P-ring protein n=10 Tax=Tardiphaga TaxID=1395974 RepID=A0A120MG70_9BRAD)

HSP 1 Score: 655 bits (1689), Expect = 1.090e-235
Identity = 354/363 (97.52%), Postives = 357/363 (98.35%), Query Frame = 1
Query:  115 MMLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            MMLRLLCGLLL  S+SAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAH +GRYQKVVAFERDYRTIVLSRPR TSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQP+PFAR GET VVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE
Sbjct:    1 MMLRLLCGLLLSLSISAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHGNGRYQKVVAFERDYRTIVLSRPRGTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPNPFAR-GETKVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 362          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A257KJW8_9BRAD (Flagellar P-ring protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A257KJW8_9BRAD)

HSP 1 Score: 621 bits (1601), Expect = 2.760e-222
Identity = 325/362 (89.78%), Postives = 347/362 (95.86%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            MLRLLCGL+L  SVSAA+AAVR+KDIA+LKGVRENQI+GYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGT LRTRNVAAV+VTADLPPFVAGGSRIDVAISS+GDASSLLGGTLV+TQLRGADGETYAVAQGAIAVGGYN+EGAAQT+SQGVATAGRIPNGALIEREVKG FSEM++L LELKNPD+ TATRI+DA+NAH  GRYQ  +AFERDYRT++L RPR+  PVRFIAEIEELL+EPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQP+PFARRGETVVVPQTFIEANE GAK+AILRG DLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE
Sbjct:    1 MLRLLCGLMLALSVSAAEAAVRIKDIASLKGVRENQIVGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTQLRTRNVAAVMVTADLPPFVAGGSRIDVAISSMGDASSLLGGTLVLTQLRGADGETYAVAQGAIAVGGYNIEGAAQTVSQGVATAGRIPNGALIEREVKGNFSEMQNLTLELKNPDYATATRIIDAVNAHGRGRYQTNIAFERDYRTVMLQRPRNAPPVRFIAEIEELLIEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPNPFARRGETVVVPQTFIEANENGAKVAILRGTDLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 362          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: Q07SH2_RHOP5 (Flagellar P-ring protein n=2 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=Q07SH2_RHOP5)

HSP 1 Score: 598 bits (1542), Expect = 2.750e-213
Identity = 312/363 (85.95%), Postives = 342/363 (94.21%), Query Frame = 1
Query:  115 MMLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            MM RL  G+++  SV+ A AAVR+KDIANLKGVRENQ+ GYGLVIGLKGTGDTLRN+PFTEQSLQSMLDNMGINIRGT+LRTRNVAAVVVTADLPPF AGG+RIDV+ISSLGD+SSL+GGTLVMT LRGADGE YAVAQGA+AVGGYN+EGAAQ+LSQGVATAGRIPNGALIEREV+GRFS+MESL+LELKNPDFVTATRI+D IN HS GRYQ  VA E+DYRT++L+RPR+ SPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNL+VRITEAPIVSQP+PF+ RGETVVVPQTFI+ANEPGAKIAILRG DLQRLVRGLNQIGLKP GIIAILQAIK+AGALQA+
Sbjct:    1 MMWRLFWGIVVALSVTTASAAVRIKDIANLKGVRENQLFGYGLVIGLKGTGDTLRNSPFTEQSLQSMLDNMGINIRGTALRTRNVAAVVVTADLPPFSAGGTRIDVSISSLGDSSSLMGGTLVMTSLRGADGEIYAVAQGAVAVGGYNIEGAAQSLSQGVATAGRIPNGALIEREVRGRFSDMESLVLELKNPDFVTATRILDVINQHSRGRYQVGVAVEQDYRTVILTRPRAVSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLTVRITEAPIVSQPAPFSPRGETVVVPQTFIDANEPGAKIAILRGTDLQRLVRGLNQIGLKPSGIIAILQAIKSAGALQAD 363          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A4Q8R1W5_9BRAD (Flagellar P-ring protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q8R1W5_9BRAD)

HSP 1 Score: 585 bits (1509), Expect = 2.800e-208
Identity = 307/362 (84.81%), Postives = 337/362 (93.09%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            MLRLL  ++L  S + ADAAVR+KDIANLKGVRENQ++GYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGT LRTRNVAAVVVTADLPP+  GGSR+DVA+SSLGDASSLLGGTL+MTQLRGADGE YAVAQGAIAVGGY+VEGAAQT+SQGV T+GRIPNGALIEREV+G+F +MESLILELKNPD+VTATRI+DAIN +  GRY   +AFERD+R+IVLSRPRS +PVRFIAEI ELLVEPDTPARVV+DERTGTVVIGRNVQ+STVAVTHGNLSVRITE P+VSQP PF+RRGETVVVPQTFIEA E GA++AILRG DLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQA+
Sbjct:    1 MLRLLSFIVLLLSCTVADAAVRIKDIANLKGVRENQLIGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTLLRTRNVAAVVVTADLPPYATGGSRMDVALSSLGDASSLLGGTLLMTQLRGADGEVYAVAQGAIAVGGYSVEGAAQTVSQGVPTSGRIPNGALIEREVQGKFYQMESLILELKNPDYVTATRIIDAINHYGQGRYSASMAFERDFRSIVLSRPRSVAPVRFIAEIGELLVEPDTPARVVIDERTGTVVIGRNVQVSTVAVTHGNLSVRITEMPVVSQPGPFSRRGETVVVPQTFIEAGENGAQVAILRGTDLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAD 362          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A346A4F0_9HYPH (Flagellar P-ring protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A4F0_9HYPH)

HSP 1 Score: 568 bits (1465), Expect = 1.340e-201
Identity = 301/362 (83.15%), Postives = 330/362 (91.16%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            M+RL   +    +V+AA+AAVR+KDIANLKGVR+NQI+GYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGIN+RGT+LRTRNVAAVVVTADLPPF + GSRIDVAISS+GDASSL GGTLVMT LRGADGE YAVAQGAIAVGGY +EG AQT+SQG  TAGRIP+G LIEREV+GRF EMESL+LELKNPDFVTATRI+DAIN   +GRY+  VAFERDYRTI+LSRPRS +PVRFIAEI EL+VEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITE P VSQP PF+R G+TVV PQTFIEANEPGA++AILRG DLQRLVRGLNQIGLKP GIIAILQAIK+AGALQA+
Sbjct:    1 MVRLALAVAXXXTVTAAEAAVRIKDIANLKGVRDNQIIGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINVRGTALRTRNVAAVVVTADLPPFASRGSRIDVAISSMGDASSLTGGTLVMTPLRGADGEVYAVAQGAIAVGGYAIEGQAQTVSQGTPTAGRIPSGGLIEREVQGRFYEMESLVLELKNPDFVTATRILDAINQFGNGRYRARVAFERDYRTIILSRPRSVAPVRFIAEIGELMVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEVPQVSQPGPFSR-GQTVVTPQTFIEANEPGAQVAILRGTDLQRLVRGLNQIGLKPSGIIAILQAIKSAGALQAD 361          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A3S0FJ83_9BRAD (Flagellar P-ring protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0FJ83_9BRAD)

HSP 1 Score: 518 bits (1334), Expect = 1.690e-181
Identity = 273/373 (73.19%), Postives = 317/373 (84.99%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRG-----------TSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            M R+L  L+L  S ++A AAVR+KDIA++KG+RENQI+GYGLVIGL GTGDTLRNAPFTEQSLQSML+NMGIN+R            T+LRTRNVAAV+VTADLPP +  G R+DV +SSLGDA+SLLGGTLVMT LR ADG  YAVAQGAI V GY+V G AQ +SQG  TAGRIPNGAL+ER V+G   EME L+LELKNPDFVTATRI+DAIN ++ GRY+  +AFERDYRTIVLS+PR   PVRF+AEI EL+VEPDTPARVV++ERTGTVVIGR+V+ISTVAVTHGNL+VR+TE P+VSQP+PF+R G+TVVVPQT +EANEPGA++AIL G DLQRLVRGLNQIGLKP GIIAILQAIK AGALQA+
Sbjct:    1 MTRILVALVLLLSAASAHAAVRIKDIADIKGLRENQIVGYGLVIGLNGTGDTLRNAPFTEQSLQSMLENMGINVRNETTSTNNPPRPTTLRTRNVAAVMVTADLPPSIGPGERMDVTVSSLGDATSLLGGTLVMTSLRAADGAVYAVAQGAITVAGYSVGGQAQNVSQGTPTAGRIPNGALVERAVQGTLHEMEFLVLELKNPDFVTATRILDAINRYAGGRYRAQIAFERDYRTIVLSKPRHIGPVRFLAEIGELMVEPDTPARVVINERTGTVVIGRDVRISTVAVTHGNLTVRVTEMPVVSQPAPFSR-GQTVVVPQTMVEANEPGAQVAILSGVDLQRLVRGLNQIGLKPSGIIAILQAIKTAGALQAD 372          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A5H2YUT2_9BRAD (Flagellar P-ring protein n=143 Tax=Proteobacteria TaxID=1224 RepID=A0A5H2YUT2_9BRAD)

HSP 1 Score: 510 bits (1314), Expect = 1.850e-178
Identity = 270/373 (72.39%), Postives = 315/373 (84.45%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRG-----------TSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            M R+L  L+L  S ++A AAVR+KDIA++KG+RENQI+GYGLVIGL GTGDTLRNAPFTEQSLQSML+NMGIN+R            T+LRTRNVAAV+VTADL P +  G R+DV +SSLGDA+SLLGGTLVMT LR ADG  YAVAQGAI V GY+V G AQ +SQG  TAGRIPNGAL+EREV+G   EME L+L+LKNPDFVTATRI+DAIN ++ GRY+  +AFERDYRTIVLS+PR   PVRF+AEI EL VEPDTPARVV++ERTGTVVIGR+V+ISTVAVTHGNL+VR+TE P+VSQP+PF+R G+TVVVPQT +EANE G+++AIL G DLQRLVRGLNQIGLKP GIIAILQAIK AGALQA+
Sbjct:    1 MTRILLALVLLLSAASAHAAVRIKDIADIKGLRENQIVGYGLVIGLNGTGDTLRNAPFTEQSLQSMLENMGINVRNETTSTNNPTRPTTLRTRNVAAVMVTADLSPSIGPGERMDVTVSSLGDATSLLGGTLVMTSLRAADGAVYAVAQGAITVAGYSVGGQAQNVSQGTPTAGRIPNGALVEREVQGSLHEMEFLVLQLKNPDFVTATRILDAINRYAGGRYRAQIAFERDYRTIVLSKPRHIGPVRFLAEIGELTVEPDTPARVVINERTGTVVIGRDVRISTVAVTHGNLTVRVTEMPVVSQPAPFSR-GQTVVVPQTVVEANEAGSQVAILSGVDLQRLVRGLNQIGLKPSGIIAILQAIKTAGALQAD 372          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: FLGI2_BRADU (Flagellar P-ring protein 2 n=14 Tax=Bradyrhizobium TaxID=374 RepID=FLGI2_BRADU)

HSP 1 Score: 509 bits (1310), Expect = 7.510e-178
Identity = 270/373 (72.39%), Postives = 314/373 (84.18%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRG-----------TSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            M RLL  L+L  S ++A AAVR+KDIA++KG+RENQI+GYGLVIGL GTGDTLRNAPFTEQSLQSML+NMGIN+R            T+LRTRNVAAV+VTADL P +  G R+DV +SSLGDA+SLLGGTLVMT LR ADG  YAVAQGA+ V GY+V G AQ +SQG  TAGRI NGAL+EREV+G   EME L+LELKNPDFVTATRI+DAIN ++ GRY+  +AFERDYRTIVLS+PR   PVRF+AEI EL VEPDTPARVV++ERTGTVVIGR+V+ISTVAVTHGNL+VR+TE P+VSQP+PF+R G+TVVVPQT +EANE G+++AIL G DLQRLVRGLNQIGLKP GIIAILQAIK AGALQA+
Sbjct:    1 MTRLLLALILVVSAASAQAAVRIKDIADIKGLRENQIVGYGLVIGLNGTGDTLRNAPFTEQSLQSMLENMGINVRNETTSTTNPARPTTLRTRNVAAVMVTADLQPSIGAGERMDVTVSSLGDATSLLGGTLVMTSLRAADGAVYAVAQGAVTVAGYSVGGQAQNVSQGTPTAGRILNGALVEREVQGSLHEMEFLVLELKNPDFVTATRILDAINRYAGGRYRAQIAFERDYRTIVLSKPRHIGPVRFLAEIGELTVEPDTPARVVINERTGTVVIGRDVRISTVAVTHGNLTVRVTEMPVVSQPAPFSR-GQTVVVPQTVVEANEAGSQVAILSGVDLQRLVRGLNQIGLKPSGIIAILQAIKTAGALQAD 372          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: A0A370HCQ1_9HYPH (Flagellar P-ring protein n=2 Tax=Microvirga TaxID=186650 RepID=A0A370HCQ1_9HYPH)

HSP 1 Score: 466 bits (1200), Expect = 2.630e-161
Identity = 247/362 (68.23%), Postives = 296/362 (81.77%), Query Frame = 1
Query:  118 MLRLLCGLLLFFSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            MLRL   L+  F  ++A A  R+KDIA ++GVR+NQ++GYGLV+GL+GTGDTLRN+ FTEQSLQSMLD MG+N+R   LRTRNVAAV VTADLPPFV  GSRIDV ++SLGDA+SL GGTL++T L GADG+ YAVAQG +AV G++  G A+TL+QGVATAGRIPNGALIEREV+G F EM SL+LELKNPD+ TAT I DAINA++ GRY K VA  RD+R++VL RP      RFIAEI +L V+PD PARVVVD+RTGTVVIG+NVQISTVA+THGNL+VR+TEAP VSQP PF+  G T VVP+T IEA+E    +A++ G+DLQ LV+GLNQIGLKP  IIAILQA+K AGALQAE
Sbjct:    1 MLRLFLLLIAVFCATSAQAMTRIKDIAAVQGVRDNQLVGYGLVMGLQGTGDTLRNSQFTEQSLQSMLDRMGVNVRDIPLRTRNVAAVTVTADLPPFVGTGSRIDVTVTSLGDATSLKGGTLMLTALMGADGQVYAVAQGPVAVSGFSAVGQAETLTQGVATAGRIPNGALIEREVQGAFREMPSLVLELKNPDYKTATLITDAINAYALGRYGKRVATPRDFRSVVLQRPHDIGTTRFIAEIGDLRVQPDAPARVVVDQRTGTVVIGKNVQISTVAMTHGNLTVRVTEAPQVSQPEPFSN-GRTTVVPRTQIEASEQDGHLAVIGGSDLQTLVKGLNQIGLKPTDIIAILQAVKTAGALQAE 361          
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Match: UPI001FE1858F (flagellar basal body P-ring protein FlgI n=1 Tax=Microvirga flavescens TaxID=2249811 RepID=UPI001FE1858F)

HSP 1 Score: 461 bits (1187), Expect = 1.740e-159
Identity = 243/346 (70.23%), Postives = 291/346 (84.10%), Query Frame = 1
Query:  166 ADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQSLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLGDASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVATAGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGRYQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERTGTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTFIEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQAE 1203
            A+AA R+KDIA ++GVR+NQ++GYGLV+GL+GTGDTLRN+ FTE SLQSMLD MG+N+R  +LRTRNVAAV+VTADLPPFV  GSRIDV ++SLGDA+SL GGTL++T L GADG+ YA AQG IAV G++  G A+TL+QGVATAGRIPNGALIEREV G F EM SL+LELKNPD+ TAT + DAINA+S  RY + VA  RD+R+IVL +P   +  RFIAEI +LLV+PDTPARVVVD+RTGTVVIGRNVQISTVA+THGNL+VR+TE P VSQP PF++ G TVVVP+T I+ANE    +AI+ G+DLQ LV+GLNQIGLKP  IIAILQA+K AGALQAE
Sbjct:    7 AEAATRIKDIAAVQGVRDNQLVGYGLVMGLQGTGDTLRNSQFTEHSLQSMLDRMGVNVRDATLRTRNVAAVIVTADLPPFVGTGSRIDVTVTSLGDATSLKGGTLMLTALMGADGQVYAAAQGPIAVSGFSATGQAETLTQGVATAGRIPNGALIEREVGGGFREMPSLVLELKNPDYKTATLMTDAINAYSMSRYGRRVATPRDFRSIVLQKPNDVASTRFIAEIGDLLVQPDTPARVVVDQRTGTVVIGRNVQISTVAMTHGNLTVRVTELPQVSQPEPFSQ-GRTVVVPRTEIQANEQDGHLAIIGGSDLQTLVKGLNQIGLKPTDIIAILQAVKTAGALQAE 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A120MG70_9BRAD1.090e-23597.52Flagellar P-ring protein n=10 Tax=Tardiphaga TaxID... [more]
A0A257KJW8_9BRAD2.760e-22289.78Flagellar P-ring protein n=2 Tax=Bradyrhizobiaceae... [more]
Q07SH2_RHOP52.750e-21385.95Flagellar P-ring protein n=2 Tax=Rhodopseudomonas ... [more]
A0A4Q8R1W5_9BRAD2.800e-20884.81Flagellar P-ring protein n=7 Tax=Bradyrhizobium Ta... [more]
A0A346A4F0_9HYPH1.340e-20183.15Flagellar P-ring protein n=1 Tax=Pseudolabrys taiw... [more]
A0A3S0FJ83_9BRAD1.690e-18173.19Flagellar P-ring protein n=1 Tax=Bradyrhizobiaceae... [more]
A0A5H2YUT2_9BRAD1.850e-17872.39Flagellar P-ring protein n=143 Tax=Proteobacteria ... [more]
FLGI2_BRADU7.510e-17872.39Flagellar P-ring protein 2 n=14 Tax=Bradyrhizobium... [more]
A0A370HCQ1_9HYPH2.630e-16168.23Flagellar P-ring protein n=2 Tax=Microvirga TaxID=... [more]
UPI001FE1858F1.740e-15970.23flagellar basal body P-ring protein FlgI n=1 Tax=M... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20722contigP-wetherbeei_contig20722:2..1204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog316056.RPC_1099
Preferred nameflgI
PFAMsFlgI
Model size1205
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02394
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464
Exons1
Evalue2.12e-219
EggNOG OGsCOG1706@1|root,COG1706@2|Bacteria,1MVKW@1224|Proteobacteria,2TQNX@28211|Alphaproteobacteria,3JVZ5@41294|Bradyrhizobiaceae
DescriptionAssembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
Cds size1203
COG categoryN
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186207.2736223-CDS-P-wetherbeei_contig20722:1..12041683186207.2736223-CDS-P-wetherbeei_contig20722:1..1204Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20722 2..1204 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20722.1.1prot_P-wetherbeei_contig20722.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20722 2..1204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20722.1.1

>prot_P-wetherbeei_contig20722.1.1 ID=prot_P-wetherbeei_contig20722.1.1|Name=mRNA_P-wetherbeei_contig20722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=401bp
NVAAIGQRRHDGAASQSRYRRDHPGHRPAGWISADSERMMLRLLCGLLLF
FSVSAADAAVRVKDIANLKGVRENQILGYGLVIGLKGTGDTLRNAPFTEQ
SLQSMLDNMGINIRGTSLRTRNVAAVVVTADLPPFVAGGSRIDVAISSLG
DASSLLGGTLVMTQLRGADGETYAVAQGAIAVGGYNVEGAAQTLSQGVAT
AGRIPNGALIEREVKGRFSEMESLILELKNPDFVTATRIMDAINAHSSGR
YQKVVAFERDYRTIVLSRPRSTSPVRFIAEIEELLVEPDTPARVVVDERT
GTVVIGRNVQISTVAVTHGNLSVRITEAPIVSQPSPFARRGETVVVPQTF
IEANEPGAKIAILRGADLQRLVRGLNQIGLKPQGIIAILQAIKAAGALQA
E
back to top

mRNA from alignment at P-wetherbeei_contig20722:2..1204-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20722.1.1 ID=mRNA_P-wetherbeei_contig20722.1.1|Name=mRNA_P-wetherbeei_contig20722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig20722:2..1204- (Phaeothamnion wetherbeei SAG_119_79)
AACGTCGCTGCAATCGGGCAGCGCCGGCATGATGGTGCAGCTTCGCAATC TCGATACCGGCGTGATCATCCGGGGCATCGTCCAGCAGGATGGATCAGTG CGGATTCAGAACGGATGATGCTGCGTCTCCTTTGCGGTCTTTTGCTCTTT TTTTCCGTTTCGGCGGCTGATGCCGCTGTGCGCGTAAAGGATATCGCCAA CCTAAAGGGCGTGCGCGAGAACCAGATTCTCGGCTATGGCCTTGTGATCG GTCTTAAAGGCACCGGCGATACATTGCGCAATGCGCCGTTCACCGAACAG TCCTTGCAGTCGATGCTCGATAACATGGGTATTAACATTCGCGGCACCTC GCTGCGTACACGTAACGTGGCCGCTGTTGTCGTGACGGCGGATCTGCCGC CGTTCGTTGCGGGTGGCTCGCGAATCGATGTCGCGATTTCGTCGCTGGGT GACGCATCGTCACTGCTCGGCGGAACGCTGGTGATGACGCAATTGCGCGG TGCCGATGGTGAAACCTATGCCGTCGCGCAAGGCGCTATTGCCGTAGGCG GTTACAACGTCGAAGGCGCCGCACAAACGCTCAGCCAGGGTGTGGCCACC GCTGGCCGTATCCCAAATGGCGCGTTGATAGAGCGTGAAGTCAAAGGGCG TTTCAGCGAGATGGAATCGCTCATTCTTGAGCTGAAGAACCCGGATTTCG TCACCGCAACGCGCATCATGGACGCGATCAACGCGCATAGCAGCGGCCGT TACCAGAAGGTCGTGGCCTTTGAGCGCGATTATCGCACCATCGTGCTGTC GCGCCCACGCTCGACCTCGCCGGTACGCTTTATCGCCGAAATCGAGGAGC TGTTGGTTGAGCCGGATACGCCGGCGCGGGTGGTGGTCGATGAACGCACG GGAACGGTGGTCATCGGTCGGAATGTGCAGATTTCGACGGTCGCAGTGAC CCATGGCAATCTGTCGGTGAGAATCACCGAGGCGCCGATCGTGTCGCAGC CGTCGCCCTTTGCGCGGCGCGGCGAGACCGTGGTGGTGCCGCAAACCTTT ATCGAAGCGAACGAGCCCGGCGCCAAGATCGCCATTCTGCGCGGCGCGGA TTTGCAGCGCCTGGTGCGCGGTCTCAATCAGATCGGCCTGAAACCGCAGG GGATCATTGCTATCTTGCAGGCGATCAAGGCAGCAGGCGCGCTACAGGCG GAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20722:2..1204-

>mRNA_P-wetherbeei_contig20722.1.1 ID=mRNA_P-wetherbeei_contig20722.1.1|Name=mRNA_P-wetherbeei_contig20722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig20722:2..1204- (Phaeothamnion wetherbeei SAG_119_79)
AACGTCGCTGCAATCGGGCAGCGCCGGCATGATGGTGCAGCTTCGCAATC
TCGATACCGGCGTGATCATCCGGGGCATCGTCCAGCAGGATGGATCAGTG
CGGATTCAGAACGGATGATGCTGCGTCTCCTTTGCGGTCTTTTGCTCTTT
TTTTCCGTTTCGGCGGCTGATGCCGCTGTGCGCGTAAAGGATATCGCCAA
CCTAAAGGGCGTGCGCGAGAACCAGATTCTCGGCTATGGCCTTGTGATCG
GTCTTAAAGGCACCGGCGATACATTGCGCAATGCGCCGTTCACCGAACAG
TCCTTGCAGTCGATGCTCGATAACATGGGTATTAACATTCGCGGCACCTC
GCTGCGTACACGTAACGTGGCCGCTGTTGTCGTGACGGCGGATCTGCCGC
CGTTCGTTGCGGGTGGCTCGCGAATCGATGTCGCGATTTCGTCGCTGGGT
GACGCATCGTCACTGCTCGGCGGAACGCTGGTGATGACGCAATTGCGCGG
TGCCGATGGTGAAACCTATGCCGTCGCGCAAGGCGCTATTGCCGTAGGCG
GTTACAACGTCGAAGGCGCCGCACAAACGCTCAGCCAGGGTGTGGCCACC
GCTGGCCGTATCCCAAATGGCGCGTTGATAGAGCGTGAAGTCAAAGGGCG
TTTCAGCGAGATGGAATCGCTCATTCTTGAGCTGAAGAACCCGGATTTCG
TCACCGCAACGCGCATCATGGACGCGATCAACGCGCATAGCAGCGGCCGT
TACCAGAAGGTCGTGGCCTTTGAGCGCGATTATCGCACCATCGTGCTGTC
GCGCCCACGCTCGACCTCGCCGGTACGCTTTATCGCCGAAATCGAGGAGC
TGTTGGTTGAGCCGGATACGCCGGCGCGGGTGGTGGTCGATGAACGCACG
GGAACGGTGGTCATCGGTCGGAATGTGCAGATTTCGACGGTCGCAGTGAC
CCATGGCAATCTGTCGGTGAGAATCACCGAGGCGCCGATCGTGTCGCAGC
CGTCGCCCTTTGCGCGGCGCGGCGAGACCGTGGTGGTGCCGCAAACCTTT
ATCGAAGCGAACGAGCCCGGCGCCAAGATCGCCATTCTGCGCGGCGCGGA
TTTGCAGCGCCTGGTGCGCGGTCTCAATCAGATCGGCCTGAAACCGCAGG
GGATCATTGCTATCTTGCAGGCGATCAAGGCAGCAGGCGCGCTACAGGCG
GAA
back to top