mRNA_P-wetherbeei_contig20721.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20721.1.1
Unique NamemRNA_P-wetherbeei_contig20721.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: A0A7S6N6A5_9GAMM (Translocation and assembly module subunit TamA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7S6N6A5_9GAMM)

HSP 1 Score: 241 bits (615), Expect = 1.100e-70
Identity = 139/371 (37.47%), Postives = 198/371 (53.37%), Query Frame = 1
Query:   28 KLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWT 1140
            K+ V GV  +L  NV AH++LA+ AC  P   +  L ++A+ E ++AL AYGYY+  ++        C  V I +  G  V +  + + V G A  DR+F   L    L  G  L+H  Y   K+ L  LA  RGY A  F E+R+++    N A + L Y SGPRY  G V+  Q   VVR +LV RF+D++P  AY    V+ FY AL A+ YF  VD+R       D  V V + L   KR  Y +G G STD+G +    Y NRRLN +GH+ ++ +  S +E  +   Y++PR  P  EWLS+ AG K++D  +  +   ++G+ +  RRP   +ETRFI    + + I        LLIPGL WT
Sbjct:   24 KVEVSGVRGKLRDNVMAHLTLAATACDAPSWRVRRLTRKADPEIREALEAYGYYNPTIRIDSSVKSGCWLVNIGIEPGEPVRLRKVDVAVTGEAAGDREFQRLLRSGQLAPGDQLDHADYERLKKALGDLARQRGYFAARFPESRIDIYTRENAADIVLHYDSGPRYHFGAVTFHQD--VVRPDLVERFVDFRPGDAYDGTKVSDFYNALLATGYFSSVDLRTSPQPPPDLTVPVSVTLAAAKRQVYTLGTGYSTDKGLKFRAGYTNRRLNESGHQFDSSMDLSKVESIVGVSYRLPRRDPRVEWLSIDAGFKYEDTASKRADTYKIGLKEFRRRPADWIETRFIDASVEEYTIADDKSREFLLIPGLSWT 392          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: UPI000376D548 (autotransporter assembly complex protein TamA n=1 Tax=Methylosarcina fibrata TaxID=105972 RepID=UPI000376D548)

HSP 1 Score: 233 bits (593), Expect = 1.840e-67
Identity = 135/369 (36.59%), Postives = 202/369 (54.74%), Query Frame = 1
Query:   67 NVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYPT 1173
            NV AH+SLA   C  P   + +L  +A++E   A+RA GYYHA +K  +  + DC      +  GPRV V  + +V+ G A DD++F+     L L+ G  LNH +Y   K R+E LAL++GYL   F E +L VD   N AR+RL + SG R+  G V + Q+  ++  + +++F+  +  + Y  E + + Y  L+ S YFDQ+DIRP   +  + +V V I LTP+ RH Y+ GLG  TD G     +Y NRRLN  GH LNA L  S +  +   EY +P   P  ++ SL AG K+ D ++F+++  +V          G   T F+   ++ F  G  T ++ LL+PG  W  +  +D L PT
Sbjct:   42 NVLAHLSLAKEDCAAPEWKIRSLFAKADEEIDPAMRALGYYHATVKKSLDFTRDCWLADFNIDPGPRVTVSDVTVVINGEAHDDKEFIKLREDL-LKTGQPLNHGQYEKMKSRIEALALEKGYLKSDFTEKKLLVDPKTNTARIRLVFDSGSRFYFGDVEVFQE--ILNPDFIKKFISIKSGEFYDTEPLVKTYNNLSKSNYFDQIDIRPDTESG-NRRVPVAITLTPKSRHHYSFGLGFDTDIGPLVSASYTNRRLNRRGHFLNANLDLSPVLSTADVEYTVPLDDPTVDFFSLGAGFKNTDTDSFKAKTAKVSARLRHEPEGGWKRTLFLDFSYEEFTTGTVTDSALLLVPGGNWRISFADDPLRPT 406          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: UPI00042A38DB (autotransporter assembly complex protein TamA n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI00042A38DB)

HSP 1 Score: 231 bits (588), Expect = 6.890e-67
Identity = 142/391 (36.32%), Postives = 201/391 (51.41%), Query Frame = 1
Query:   37 VRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIH------------LDHQAFDI-GQRTRASTLLIPGLRWTKTTTNDALYP 1170
            + GV     AN+ A +SL   +C +P   +      A++E   ALRA GYY   ++T    + +C +  I V  GPR+ +  + L + G A DD  F   L   PL+ G  L+H +Y   K RL  LA  RGY  G F  + L+VD +R +A +RL Y SG RYR+G + I+Q   ++  + VRR+L  +  + Y+   +   Y ALA S+YF  V+IRP     R+GQ+ V I L PRK+H + IG G  T+ G R  L Y NRR+N  GHRL    RAS +   LSG Y IP  +P  E LSLQ G  H++              DTLR    +    F+H            L +++ +I G   ++S LLIP +RW +   +D L P
Sbjct:   13 IEGVEGERLANIEAQLSLLDESCDSPRWRVEDSFSLAKREIGKALRALGYYQPVIRTDFSFTPECWQAEIFVEPGPRIELAEVDLKISGEAADDPKFQAILQNPPLKAGDPLHHGRYENLKSRLINLAEQRGYFDGRFSVHELKVDPSRGLAWIRLHYDSGRRYRLGEIEIRQD--ILNPDFVRRYLPVKAGEPYSGAQMAETYQALADSEYFADVEIRPAREEIREGQIPVTIRLFPRKQHYFKIGAGFDTNTGPRLSLGYENRRVNRRGHRLEINGRASPVRSELSGRYLIPWTNPVQETLSLQGGYLHEE-------------TDTLRTDSAVFGAHFVHPRRRWTEQFGLDLKYESSNIEGDENQSSLLLIPAIRWNRVKADDRLRP 388          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: A0A7C1CXA9_9GAMM (Translocation and assembly module subunit TamA n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1CXA9_9GAMM)

HSP 1 Score: 227 bits (579), Expect = 2.600e-65
Identity = 137/390 (35.13%), Postives = 206/390 (52.82%), Query Frame = 1
Query:    1 PAVVAVPTIKLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYP 1170
            P +   P I+L   G+ D LA N+R+H+S+   AC        AL +RA+ E++ ALRA GYY   L+  + R G+C R+ I V  G R+ V  + + +EG A DD  F   LA  PL+ G  L HD+Y   ++ L  LA DRGY     +   L V+V    A   +   SG RY  GTVS++Q   ++R ELV +FL       Y A  +      LA S Y+ +V +R +  A  DG+V + + LTPRKRH Y +G+GASTD G R  L + NR  N  GHR   ++  S +       Y+IP   P+ E ++L A  + ++ +  ES    +G++ T++   G +ETR +  + + + +   T  S LL+PGL  T+  ++  + P
Sbjct:   32 PVLAQAPEIRL--PGLGDELADNIRSHLSIGREACDLATWRERALLRRADDEARKALRALGYYSPDLEFVLHREGECWRLDIAVDPGERIRVRHVDVTIEGEAADDPAFDALLADAPLKPGDPLRHDRYEDLRKALTRLAADRGYFDHQVLVRELRVNVGEGHADAVIHMDSGARYAFGTVSVEQD--ILRPELVAKFLPVHEGDPYEARKLIDLQQRLADSDYYSEVRVRTETDARADGRVPIQVQLTPRKRHAYLVGIGASTDIGPRLRLGFENRYANRLGHRYQFDMELSPVRSGTGFNYEIPLDDPSRERVNLLARYQTEETDTAESDIYGLGVSHTIQHNSGWVETRSLSFEREDYTVADVTDRSDLLMPGLALTRVRSDHPINP 417          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: UPI001E47AB1C (autotransporter assembly complex protein TamA n=1 Tax=Methylobacter luteus TaxID=415 RepID=UPI001E47AB1C)

HSP 1 Score: 226 bits (575), Expect = 7.490e-65
Identity = 130/379 (34.30%), Postives = 202/379 (53.30%), Query Frame = 1
Query:   37 VRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYPT 1173
            V GV  +   NV   +SL   AC  P   + +L  +A+QE   ALRA GYYHA ++  +    DC +    +  GP+ VV AI + ++G A DD +F      LPL++G+ ++H  Y + KRR E LAL+RGYL   F E+RL +D  RN AR+ L + +G R   G V+++Q   ++  + V +++  +  + YA   + + + AL+ S YFD V+I P +      +V V I L+P++RH Y+ GLG  TD G   +  Y NRRLN  GH L A L  S +      EY IP   P  +  S   G +++D +NF+S++  +          G  +T FI L ++ F+    +  + LL+PG  W ++  +  + PT
Sbjct:   27 VSGVKGQARDNVLLMLSLEKEACDAPEWKIRSLYAQADQEIDQALRALGYYHAAVEKSLNFKRDCWQAGFAIRPGPQAVVSAIDITIKGDAHDDLEFQKLRNDLPLKIGSPVHHGHYESLKRRFEALALERGYLNATFSESRLLIDKDRNSARIELVFDAGKRMYFGDVTVRQD--ILNPDFVEKYISIKEGEYYATGELVKTHNALSQSDYFDSVEIIPDIEHIEQQRVPVAITLSPKRRHLYSFGLGFDTDLGPLANATYKNRRLNRRGHFLTANLDISQVLSIADVEYSIPLEDPVHDVFSFGGGFRYEDTDNFKSKKAALSTRYKKALDNGWKQTLFIDLSYEEFETETESGEALLLVPGASWLRSVADSVVRPT 403          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: A0A2N6GFB6_9GAMM (Translocation and assembly module subunit TamA (Fragment) n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A2N6GFB6_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 6.140e-64
Identity = 128/379 (33.77%), Postives = 201/379 (53.03%), Query Frame = 1
Query:   28 KLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDAL 1164
            +L + GV   L  N+ A +SL    C TPG  +  L K++ +E  +A RA GYY  K++ ++     C +    +  G    + +  + V G    D DF   +AK P++VGA ++H +Y   KR +E +A ++GY    F + +L+VD  +   +V L +ASG RY++G + + Q   V  E+L++R++ +     Y    +     AL  S YFD V +RP L AA  G V +D+NLTPRKR  Y +G+GA+TD G R  L Y  RR+N  GH   A+   S ++  LS EY IP + P    L  ++G +H++ +   +    +G A+ L R  G  ET  I    + + IG  T   +LLIP + W++T  +D +
Sbjct:   35 ELKIEGVKGELLDNLHAGLSLTRETCETPGWRVKRLFKQSNKELVNAARALGYYRIKIEKKLTFEKQCWQARFTIDPGEAQTITSTDIRVTGDGNSDPDFFALIAKSPVQVGAIVHHGQYENLKRDMEIIAAEKGYFDAAFTDKQLQVDTRQGTTKVILHFASGVRYQVGQLRLHQD--VYEEKLLKRYIKFAHGDPYQTSQLVELQKALTDSGYFDSVSVRPDLKAAEQGVVDIDVNLTPRKRKAYQLGIGAATDTGPRVVLGYERRRINRLGHSFEAKATLSPVDTMLSAEYIIPLSRPNSYRLGFRSGYRHQETDASTTTTTSIG-ANLLGRRNGWRETIAIDWVSEEYIIGDETTDGSLLIPSIAWSRTVADDQI 410          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: B8GL28_THISH (Translocation and assembly module subunit TamA n=2 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GL28_THISH)

HSP 1 Score: 223 bits (567), Expect = 1.090e-63
Identity = 129/381 (33.86%), Postives = 199/381 (52.23%), Query Frame = 1
Query:   28 KLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYP 1170
            +L + GV   L  N+R H+S+A   C  P      L +RA +E+++ALRA GYY  +L+   +R+ DC  + + V  G  V V  + + ++G A +D  F   LA  P++ G  L HD+Y   +  L  LA DRGYL    +   L V     VA   +   SG RYR GT++I+Q   +++ E V +FL ++  + Y +  +     AL    YF  V +R +  A  DG V + + LTPR RH Y  G+GASTD G R  L Y +R  N +GHR N EL  S +   +   Y+IP   PA E ++L A  + +D +   S    +G++ T +   G LETR +  + + + +   T  S LL+PGL +++   +  ++P
Sbjct:   24 RLNITGVGAELEDNIRVHLSIAREDCELPAWRERPLLRRANEETREALRALGYYRPELEMDFRRTEDCWTLEVRVQPGEPVRVRTVEVTLDGEAGEDPAFRALLADAPMKPGDVLRHDRYEQLRNSLTRLAADRGYLDNRIITRELRVHAGEGVADAVIHMDSGVRYRFGTITIEQD--ILKPEFVDKFLPFEEGEPYDSVRLIDLQQALVDGNYFSDVRVRTETEARADGAVPIRVELTPRPRHAYLAGIGASTDIGPRLRLGYEHRYANRSGHRYNTELELSPVRSGVGFNYEIPLDEPARERINLMARYQTEDTDTVRSDLYGLGVSHTRQHDSGWLETRSLVYEREDYTVAGITDRSDLLMPGLSFSRVRADHPVFP 402          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: A0A257NAB8_9GAMM (Translocation and assembly module subunit TamA n=1 Tax=Methylococcaceae bacterium NSM2-1 TaxID=1917482 RepID=A0A257NAB8_9GAMM)

HSP 1 Score: 223 bits (567), Expect = 1.250e-63
Identity = 133/386 (34.46%), Postives = 205/386 (53.11%), Query Frame = 1
Query:   16 VPTIKLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYPT 1173
            + T ++ V G+  +   NVR  +SL    C  P   +  + ++A+QE    LRA GYYHA +   +     C +   ++  GPRV +  I++   GAA DD +F     KL    G+ L+H +Y   K R+E+LAL+RGYL G F E +L +D   N A ++L +A+G R   G V ++Q   ++  E V +++  +  + Y++E + + +  L+ S YF+ VDI P      D +V V I L PR +H YA G+G  TD G     AY NRRLN  GH L +EL  S +  + S EY +P  +P  +  S   GLK +D ++F++   ++          G  +T F+ LD++ F IG     + LL+PG  W K+ +ND L PT
Sbjct:   27 IATAEISVAGLDGKAKDNVRLMLSLEKEKCDAPEWKIRGMFEKADQEIDQGLRALGYYHAVINKSLAFGKTCWKAGFDINPGPRVFINDISITFNGAAHDDPEFQKLRDKLLKMTGSPLDHGQYEKMKSRIESLALERGYLQGTFTEKKLLIDKQLNQAHIKLVFAAGKRMVFGKVVVEQD--ILNPEFVEKYISIKSGEFYSSEQMAKTHNDLSKSGYFEIVDIHPDTENV-DQKVPVTIKLQPRNKHHYAFGVGFDTDIGPLVSAAYDNRRLNRRGHFLTSELDLSPVLSTASIEYNVPLNNPISDSFSFGGGLKREDTDSFDTVSAKLSGRLKHALESGWKQTLFLDLDYEDFTIGSTRTKTLLLVPGGSWLKSVSNDPLRPT 409          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: UPI001F4F63A4 (autotransporter assembly complex protein TamA n=1 Tax=Candidatus Methylobacter oryzae TaxID=2497749 RepID=UPI001F4F63A4)

HSP 1 Score: 223 bits (567), Expect = 1.250e-63
Identity = 131/381 (34.38%), Postives = 207/381 (54.33%), Query Frame = 1
Query:   37 VRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPF--GILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYPT 1173
            + G+S     NV+  +SLA   C TP   +  L  +A+ E   ALRA GYY+  +K  +     C +    + +GP+ +V  + + + G ARDD +F      L  E G +L HD+Y   K RLE LA++RGYL   F E  L VD   N A+V+L + +G R   G V+++Q   ++  ELV RF+  +    Y++E + + +AAL+ S YF ++DI P  G +R+GQV V I L P KRH Y+ G+G  TD+G   + AY NR +N  GH ++A +  + +  +   EY +P   PA+++ S+ AG K +D   + S+  +  ++  L+  F  G  +T FI   ++ F IG  +    LL+PG  W ++  +  + PT
Sbjct:   33 INGLSGEAKKNVQLTLSLAKEQCQTPEWKIRGLFNKADDEIYRALRALGYYNPAVKKSLVFDSKCWQAEFTIERGPQTIVSGVDITLNGDARDDPEFQKLRNSLLAEKGKALRHDQYEKMKSRLEALAMERGYLDAAFSEKELLVDKANNTAQVKLVFNTGKRKVFGAVTVEQN--ILNSELVDRFISIKRGDFYSSEQLAKTHAALSKSGYFGRIDIVPDTGNSREGQVPVGIKLYPGKRHHYSFGIGYDTDKGPLFNAAYINRLVNRRGHFIDANIDITPVLSTADAEYNVPLDDPANDFFSVGAGFKREDVSVYRSKAAK--LSARLKHTFDSGWKQTLFIDSLYEDFTIGSTSNQVYLLVPGGSWLRSVADSTMRPT 409          
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Match: A0A1I4S564_ECTMO (Translocation and assembly module subunit TamA n=3 Tax=Ectothiorhodospira mobilis TaxID=195064 RepID=A0A1I4S564_ECTMO)

HSP 1 Score: 221 bits (564), Expect = 4.550e-63
Identity = 134/384 (34.90%), Postives = 198/384 (51.56%), Query Frame = 1
Query:   19 PTIKLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAEQESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVEGAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHFVENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLDYQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTPRKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLSGEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILETRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYP 1170
            PT++++  GV    A N+RAH+      C  P        + AE ++  ALRA G+Y   ++  ++R+ DC R+ + V  GP V V  + + ++G A  D  F   L   P+  G  L HD Y   K  L  LA  RGY    F    L VD     A V +   SGPRYR+G V+++Q      E L+RRF+ ++  + YA + + R   A   S YF QV + P+  AARD  V + + L PR R  Y  G+GASTD G    L   N R+N AGHR +A L  S +  S + +Y+IPR  PA E + L AG + +D ++ +S    +GIA   + P G ++TR +  + + + I      S LLIP L  ++T  +D ++P
Sbjct:   44 PTLEIL--GVEGAPAENIRAHLGPERADCDLPAWQEEPWLEDAEADTLRALRALGFYTPSVELDLRRTQDCWRLEVRVEPGPPVRVRRVDIRLQGEAAKDPAFTALLDAPPIREGQVLRHDDYARLKSELGRLASARGYFDNRFTRTELRVDPKARAAEVIVHMDSGPRYRLGAVTLEQD--AFHEPLLRRFVPFEEGEPYATDHLIRMQQAFIDSGYFSQVRVEPRPDAARDRAVPIHVRLVPRNRWSYLAGIGASTDTGPHLRLGVENHRVNRAGHRYDARLELSPVRSSANLDYEIPRGDPARERILLSAGWQTEDTDSSDSDLYGLGIAHVRQMPSGWMQTRALRYEQETYRISDEEDTSHLLIPSLELSRTRADDPVFP 423          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20721.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6N6A5_9GAMM1.100e-7037.47Translocation and assembly module subunit TamA n=1... [more]
UPI000376D5481.840e-6736.59autotransporter assembly complex protein TamA n=1 ... [more]
UPI00042A38DB6.890e-6736.32autotransporter assembly complex protein TamA n=1 ... [more]
A0A7C1CXA9_9GAMM2.600e-6535.13Translocation and assembly module subunit TamA n=1... [more]
UPI001E47AB1C7.490e-6534.30autotransporter assembly complex protein TamA n=1 ... [more]
A0A2N6GFB6_9GAMM6.140e-6433.77Translocation and assembly module subunit TamA (Fr... [more]
B8GL28_THISH1.090e-6333.86Translocation and assembly module subunit TamA n=2... [more]
A0A257NAB8_9GAMM1.250e-6334.46Translocation and assembly module subunit TamA n=1... [more]
UPI001F4F63A41.250e-6334.38autotransporter assembly complex protein TamA n=1 ... [more]
A0A1I4S564_ECTMO4.550e-6334.90Translocation and assembly module subunit TamA n=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20721contigP-wetherbeei_contig20721:2..1174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1283300.ATXB01000001_gene948
PFAMsBac_surface_Ag,POTRA,POTRA_TamA_1
Model size1173
Max annot lvl135618|Methylococcales
KEGG koko:K07278
KEGG TC1.B.33.2.4
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-67
EggNOG OGsCOG0729@1|root,COG0729@2|Bacteria,1MUKM@1224|Proteobacteria,1RNQ3@1236|Gammaproteobacteria,1XDP5@135618|Methylococcales
DescriptionSurface antigen variable number
Cds size1173
COG categoryM
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186207.2400692-CDS-P-wetherbeei_contig20721:1..11741683186207.2400692-CDS-P-wetherbeei_contig20721:1..1174Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20721 2..1174 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20721.1.1prot_P-wetherbeei_contig20721.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20721 2..1174 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20721.1.1

>prot_P-wetherbeei_contig20721.1.1 ID=prot_P-wetherbeei_contig20721.1.1|Name=mRNA_P-wetherbeei_contig20721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=391bp
PAVVAVPTIKLVVRGVSDRLAANVRAHVSLASRACTTPGAYLSALAKRAE
QESQDALRAYGYYHAKLKTRVQRSGDCPRVVIEVVQGPRVVVEAIALVVE
GAARDDRDFMTPLAKLPLEVGASLNHDKYTATKRRLETLALDRGYLAGHF
VENRLEVDVTRNVARVRLRYASGPRYRIGTVSIKQQPQVVREELVRRFLD
YQPDQAYAAELVTRFYAALAASQYFDQVDIRPQLGAARDGQVAVDINLTP
RKRHKYAIGLGASTDEGARTHLAYANRRLNPAGHRLNAELRASLIEQSLS
GEYQIPRAHPADEWLSLQAGLKHKDGENFESQELQVGIADTLRRPFGILE
TRFIHLDHQAFDIGQRTRASTLLIPGLRWTKTTTNDALYPT
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mRNA from alignment at P-wetherbeei_contig20721:2..1174-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20721.1.1 ID=mRNA_P-wetherbeei_contig20721.1.1|Name=mRNA_P-wetherbeei_contig20721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig20721:2..1174- (Phaeothamnion wetherbeei SAG_119_79)
CCTGCGGTAGTGGCGGTACCGACCATCAAGCTGGTAGTGCGCGGTGTCAG CGATCGGCTGGCGGCTAATGTCCGCGCCCATGTGTCGCTGGCAAGTCGCG CCTGCACTACACCCGGCGCTTATTTGAGCGCCTTGGCCAAGCGCGCCGAA CAGGAGTCGCAGGACGCACTGCGCGCCTACGGCTATTACCATGCCAAGCT CAAGACCCGCGTGCAGCGTAGTGGCGATTGTCCGCGCGTGGTGATCGAGG TGGTGCAGGGGCCGCGGGTGGTGGTCGAAGCGATTGCACTGGTGGTCGAG GGCGCAGCGCGGGACGACCGGGATTTCATGACGCCACTCGCCAAGCTGCC GCTGGAAGTCGGTGCGAGTCTCAATCACGACAAGTACACCGCCACCAAGC GACGCTTGGAAACCCTCGCACTTGACCGTGGTTATCTCGCCGGACATTTT GTTGAGAACCGCCTGGAAGTGGACGTGACGCGCAACGTCGCGCGCGTGCG TCTGCGCTATGCCAGTGGTCCGCGCTATCGCATCGGCACCGTCAGCATCA AGCAGCAGCCGCAGGTGGTACGCGAGGAGCTGGTGCGCCGGTTTCTCGAC TATCAACCCGACCAGGCCTATGCGGCGGAACTCGTCACGCGCTTCTATGC GGCGCTCGCGGCCAGCCAATATTTCGACCAGGTCGACATCCGCCCGCAAC TCGGCGCCGCCCGCGATGGTCAGGTCGCGGTCGATATCAATCTCACGCCA CGCAAGCGCCATAAATATGCCATCGGTCTCGGTGCCTCGACCGATGAAGG GGCGCGCACCCATCTCGCCTACGCCAATCGACGTCTGAATCCGGCCGGCC ATCGCCTGAATGCCGAACTGCGTGCGTCCTTGATCGAGCAAAGCCTGTCC GGTGAGTATCAGATACCACGCGCCCATCCGGCGGATGAATGGTTGAGCTT GCAGGCCGGCCTCAAGCATAAGGATGGCGAGAATTTCGAAAGTCAGGAAC TGCAGGTAGGTATTGCCGACACCTTGCGCCGGCCTTTTGGCATCCTTGAA ACGCGCTTCATCCACCTCGACCACCAGGCCTTTGACATCGGCCAGCGCAC GCGAGCTTCGACCTTGCTGATCCCCGGCTTACGCTGGACCAAGACCACCA CCAACGATGCGCTTTATCCGACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20721:2..1174-

>mRNA_P-wetherbeei_contig20721.1.1 ID=mRNA_P-wetherbeei_contig20721.1.1|Name=mRNA_P-wetherbeei_contig20721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig20721:2..1174- (Phaeothamnion wetherbeei SAG_119_79)
CCTGCGGTAGTGGCGGTACCGACCATCAAGCTGGTAGTGCGCGGTGTCAG
CGATCGGCTGGCGGCTAATGTCCGCGCCCATGTGTCGCTGGCAAGTCGCG
CCTGCACTACACCCGGCGCTTATTTGAGCGCCTTGGCCAAGCGCGCCGAA
CAGGAGTCGCAGGACGCACTGCGCGCCTACGGCTATTACCATGCCAAGCT
CAAGACCCGCGTGCAGCGTAGTGGCGATTGTCCGCGCGTGGTGATCGAGG
TGGTGCAGGGGCCGCGGGTGGTGGTCGAAGCGATTGCACTGGTGGTCGAG
GGCGCAGCGCGGGACGACCGGGATTTCATGACGCCACTCGCCAAGCTGCC
GCTGGAAGTCGGTGCGAGTCTCAATCACGACAAGTACACCGCCACCAAGC
GACGCTTGGAAACCCTCGCACTTGACCGTGGTTATCTCGCCGGACATTTT
GTTGAGAACCGCCTGGAAGTGGACGTGACGCGCAACGTCGCGCGCGTGCG
TCTGCGCTATGCCAGTGGTCCGCGCTATCGCATCGGCACCGTCAGCATCA
AGCAGCAGCCGCAGGTGGTACGCGAGGAGCTGGTGCGCCGGTTTCTCGAC
TATCAACCCGACCAGGCCTATGCGGCGGAACTCGTCACGCGCTTCTATGC
GGCGCTCGCGGCCAGCCAATATTTCGACCAGGTCGACATCCGCCCGCAAC
TCGGCGCCGCCCGCGATGGTCAGGTCGCGGTCGATATCAATCTCACGCCA
CGCAAGCGCCATAAATATGCCATCGGTCTCGGTGCCTCGACCGATGAAGG
GGCGCGCACCCATCTCGCCTACGCCAATCGACGTCTGAATCCGGCCGGCC
ATCGCCTGAATGCCGAACTGCGTGCGTCCTTGATCGAGCAAAGCCTGTCC
GGTGAGTATCAGATACCACGCGCCCATCCGGCGGATGAATGGTTGAGCTT
GCAGGCCGGCCTCAAGCATAAGGATGGCGAGAATTTCGAAAGTCAGGAAC
TGCAGGTAGGTATTGCCGACACCTTGCGCCGGCCTTTTGGCATCCTTGAA
ACGCGCTTCATCCACCTCGACCACCAGGCCTTTGACATCGGCCAGCGCAC
GCGAGCTTCGACCTTGCTGATCCCCGGCTTACGCTGGACCAAGACCACCA
CCAACGATGCGCTTTATCCGACC
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