mRNA_P-wetherbeei_contig20644.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20644.1.1
Unique NamemRNA_P-wetherbeei_contig20644.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A2E2NMB4_9DELT (Aspartate/glutamate leucyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E2NMB4_9DELT)

HSP 1 Score: 148 bits (373), Expect = 3.830e-41
Identity = 78/176 (44.32%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRW--KKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCDPK-RSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWMDQPAEG 519
            C AC +LRIPVD FRP K+QR++W++NQDI+VTVGPA FSQE+ +LY  ++ +R   +    +T + +   ++    Q ++  + L  KLVGV  VD  ++ +SSVY  +D D   RSLG +S L E+ W R       Y+GLYV  CD + YKA F PH+RR  +GEW+    EG
Sbjct:   62 CTACEALRIPVDEFRPKKSQRRVWRKNQDIKVTVGPAKFSQERLDLYNRHKRERGLSRDGKEMTQQGYEGWFINTCVQTMELCFSLNEKLVGVSIVDVGARDTSSVYHYFDPDLSGRSLGTFSALVEMAWCRTRRGRFHYMGLYVGECDRLNYKARFLPHERRV-DGEWIRMGKEG 236          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A6C1PPM5_9SPIO (Aspartate/glutamate leucyltransferase n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6C1PPM5_9SPIO)

HSP 1 Score: 137 bits (346), Expect = 4.560e-37
Identity = 71/167 (42.51%), Postives = 94/167 (56.29%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWD-CDPKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEW 498
            C  C  +R+PV  F P+++QR+  +RN D+ V  GPA +  E Y LY  Y + R   ES   P+ F    +  P       Y +  +LVG GWVD    G SS+YF +D  + +RSLG YSV+ EIE+AR+ G   +YLG YV G   M YKA F PH+    NGEW
Sbjct:   59 CGCCTPIRVPVREFTPSRSQRRATRRNGDVRVEAGPAEYDDEVYALYASYLQSRHPSESEPAPQGFVHFLVDSPVNTSLMRYFVGNRLVGAGWVDVLDDGLSSIYFAFDPAEHRRSLGTYSVIREIEYARELGLSWLYLGFYVPGSPKMEYKARFAPHEVAV-NGEW 224          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A2E7UVH5_9DELT (Arginyltransferase n=3 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UVH5_9DELT)

HSP 1 Score: 137 bits (346), Expect = 6.240e-37
Identity = 69/173 (39.88%), Postives = 107/173 (61.85%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRW--KKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWD-CDPKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWMDQP 510
            C AC  +RIPV +F  +++Q+++ K+N+D+ V  GP+ F+ EK  LY  ++  R   + E  +T   +   ++Q   Q +D  YR++G+L+G G +D     +SSVYF +D  + KRSLG++SVL E+ W R  G    YLGLYVD C  + YKA++ PH+R + +G WM  P
Sbjct:   62 CQACEPIRIPVSTFLSSRSQKRVIKKNRDVTVASGPSTFTAEKLALYNRHKHLRGLSRDERPMTRRGYEGWFVQSCTQTIDMEYRVDGRLIGCGIIDLGRLDTSSVYFFFDPMESKRSLGVFSVLMEVAWLRSRGGRFHYLGLYVDSCRHLNYKAAYFPHERFF-DGSWMPFP 233          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A7C5ZE05_9BACT (Aspartate/glutamate leucyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C5ZE05_9BACT)

HSP 1 Score: 137 bits (346), Expect = 6.910e-37
Identity = 73/170 (42.94%), Postives = 103/170 (60.59%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLE-GKLVGVGWVDATSKGSSSVYFVWD-CDPKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWMD 504
            C  C+ +R+PV +F  +K+QR++W+RNQD+ VTVG A+ SQEK+ LY+ Y   R   +   +P AF       P + ++F YRL  GKL+  G  D   +  SSVYF +D  + +RS GI+ VL EI++ARQ     VYLG +V+G  +M YKA F P Q    +G W D
Sbjct:   86 CRRCVQIRVPVATFAMSKSQRRVWRRNQDLLVTVGRAVPSQEKFLLYRRYLLHRHDGKQDDSPAAFESFLYDSPTRTIEFEYRLRTGKLIAAGICDIARRSLSSVYFFFDPAESRRSPGIFGVLQEIDFARQQAIPYVYLGYWVEGAQTMDYKAQFRPLQLLGGDGAWRD 255          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A2A4SV03_9DELT (Aspartate/glutamate leucyltransferase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SV03_9DELT)

HSP 1 Score: 136 bits (342), Expect = 1.250e-36
Identity = 66/168 (39.29%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCDP-KRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWM 501
            C  CISLRIPV+ F P+++Q+++W++NQD+ +T  P  F +E Y LY+ Y + R   +ST T E + +  +    + +   Y L  KLVGVGW+D      SSVYF +D +   RSLG++S++ EIE+ R+  +  ++LG +V    +M+YK+++ PHQ    N EW+
Sbjct:   59 CKQCISLRIPVNQFLPSRSQKRVWRKNQDLRITHAPVTFDEESYNLYQSYSQNRH--QSTTTREEYCQFLIHSAVETIMMRYYLADKLVGVGWLDLLPDSISSVYFAFDPELLTRSLGVFSIMKEIEFCREHQKSYLHLGFWVKENQAMKYKSNYQPHQL-LNNNEWV 223          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A7V2CKM6_9BACT (Aspartate/glutamate leucyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKM6_9BACT)

HSP 1 Score: 129 bits (325), Expect = 1.840e-33
Identity = 67/177 (37.85%), Postives = 101/177 (57.06%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCDP-KRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWMDQPAEGWPA 528
            CA C  +R+PVD FRP+++QR++W++N+D+ V VG  +++  K+ L++ YQE +       T + F       P   L+  Y+L  +L+G   VD + +  SSVYF W      RSLG YS+L+EI++ R++G    YLGL+V    +M YKA F P Q     G W+  P    PA
Sbjct:   95 CAECRPIRVPVDRFRPSRSQRRVWRKNRDLTVRVGRPVYTAAKWRLFREYQEHQHDGTMVRTVDDFRSFLYASPVHTLEVCYQLGQRLLGASIVDRSRRSLSSVYFYWSPQQASRSLGTYSILWEIDFCRRSGIPWYYLGLFVRNSKTMSYKARFRPCQIMTAAGRWVTLPPPRRPA 271          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A5C7WRP1_9PROT (Arginyltransferase n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7WRP1_9PROT)

HSP 1 Score: 127 bits (320), Expect = 3.910e-33
Identity = 66/168 (39.29%), Postives = 102/168 (60.71%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCD-PKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWM 501
            C  CI LR+PV+ F PNK+QR+ W+R +D++V V    +++EK+E+Y  + ++  ++ES  + E F+  +       L+F Y +EG L  VG V+ T +  SSVYF +  D  K SLG YSV+ EI++AR+  ++ +YLG YV     M YKA FHP++       W+
Sbjct:   59 CHQCIPLRVPVEDFTPNKSQRRAWRRCRDVDVVVDKPRYTKEKWEIYHDHLQRFNREESISSAEDFAFSFYDTTIPALEFCYYVEGVLAAVGIVNVTPQALSSVYFTYRLDYAKLSLGTYSVMAEIDYARRNSKKYLYLGYYVRDNHFMSYKARFHPNEVLMSGSHWV 226          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A1S9D0W5_9GAMM (Aspartate/glutamate leucyltransferase n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D0W5_9GAMM)

HSP 1 Score: 127 bits (319), Expect = 5.380e-33
Identity = 72/169 (42.60%), Postives = 94/169 (55.62%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWK--KESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCDP-KRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEW 498
            C AC+ +R+ +DSFRPN+NQR+ W  NQD+EV     +F+ + Y LY+ Y   R        LTPE F      +    L + +R    LV V  VD      S+VY  +D D  +RSLG Y+VLYEIE AR  G   +YLG ++D C  MRYKA F P +  Y NG W
Sbjct:   69 CRACVPVRVAIDSFRPNRNQRRTWLHNQDLEVRPVAPVFTMDHYSLYRRYVSVRHPGGDMEDLTPERFINFLAARWANTLFYEFRRGIHLVAVAAVDRIDDALSAVYTFFDTDEERRSLGRYAVLYEIEKARTEGLRWLYLGYWIDACQKMRYKAEFQPLEY-YCNGRW 236          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A356FFE1_9BACT (Aspartate/glutamate leucyltransferase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFE1_9BACT)

HSP 1 Score: 126 bits (316), Expect = 1.140e-32
Identity = 61/163 (37.42%), Postives = 101/163 (61.96%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKES----TLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCD-PKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQ 474
            C+ C+S+R+PVD F P+++QR++ ++N ++ V VG      E+ +LY+ +   R  +      T++ E + E +       L+F YRL+ +LV V +V    +  +S+Y   D D P+RSLG++ VL EIE AR+ G+  +YLG YV+GC SM YKA++ P++
Sbjct:   60 CSECLSMRVPVDRFEPSRSQRRVLRKNSELRVEVGEPRIDDERLDLYRAHHADREARRDWPSVTMSSEEYYETFCFNAVSTLEFCYRLDERLVAVAYVGEAERSLNSIYAFIDPDFPRRSLGVFDVLCEIEEARRLGKRHLYLGYYVNGCKSMEYKAAYRPYE 222          
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Match: A0A3M1QUC4_9BACT (Aspartate/glutamate leucyltransferase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M1QUC4_9BACT)

HSP 1 Score: 125 bits (315), Expect = 2.230e-32
Identity = 74/183 (40.44%), Postives = 102/183 (55.74%), Query Frame = 1
Query:    1 CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLYQEQRWKKESTLT-----PEA-FSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKGSSSVYFVWDCDP-KRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRYKASFHPHQRRYRNGEWMDQPA-EGWP 525
            C AC+ +RIPV  FRP+++QR++W+RN+D+ V V P  F +E Y+L++ YQ         L      PEA +    +  P       YRL G+LVGVG VD      SSVY+ +D +  +RSLG YSVL+E+ +AR+ G    YLG +++ C  MRYK  F P        EW D  A   WP
Sbjct:   61 CRACVPVRIPVARFRPSRSQRRVWRRNRDLTVAVVPPRFRREHYDLFRRYQRDHHGDTMELARPGEPPEAGYHRFLVASPVATEHHEYRLGGRLVGVGVVDRLPAALSSVYYFYDPEEGRRSLGTYSVLWEVAYARRLGLAHHYLGYWIEACAKMRYKQRFQPL-------EWFDGAAWRRWP 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20644.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2NMB4_9DELT3.830e-4144.32Aspartate/glutamate leucyltransferase n=1 Tax=Delt... [more]
A0A6C1PPM5_9SPIO4.560e-3742.51Aspartate/glutamate leucyltransferase n=1 Tax=Spir... [more]
A0A2E7UVH5_9DELT6.240e-3739.88Arginyltransferase n=3 Tax=Deltaproteobacteria bac... [more]
A0A7C5ZE05_9BACT6.910e-3742.94Aspartate/glutamate leucyltransferase n=1 Tax=Phyc... [more]
A0A2A4SV03_9DELT1.250e-3639.29Aspartate/glutamate leucyltransferase n=1 Tax=SAR3... [more]
A0A7V2CKM6_9BACT1.840e-3337.85Aspartate/glutamate leucyltransferase n=1 Tax=Phyc... [more]
A0A5C7WRP1_9PROT3.910e-3339.29Arginyltransferase n=1 Tax=Nitrosomonas sp. TaxID=... [more]
A0A1S9D0W5_9GAMM5.380e-3342.60Aspartate/glutamate leucyltransferase n=1 Tax=Chro... [more]
A0A356FFE1_9BACT1.140e-3237.42Aspartate/glutamate leucyltransferase n=2 Tax=Plan... [more]
A0A3M1QUC4_9BACT2.230e-3240.44Aspartate/glutamate leucyltransferase n=1 Tax=Nitr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20644contigP-wetherbeei_contig20644:2..583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog665571.STHERM_c16890
PFAMsATE_C,ATE_N
Model size582
Max annot lvl203691|Spirochaetes
KEGG rclassRC00064
KEGG koko:K21420
KEGG ReactionR11547,R11548
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.27e-33
EggNOG OGsCOG2935@1|root,COG2935@2|Bacteria,2J8BW@203691|Spirochaetes
EC2.3.2.29
DescriptionArginine-tRNA-protein transferase, N terminus
Cds size582
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.3798761-CDS-P-wetherbeei_contig20644:1..5831683186205.3798761-CDS-P-wetherbeei_contig20644:1..583Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20644 2..583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20644.1.1prot_P-wetherbeei_contig20644.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20644 2..583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20644.1.1

>prot_P-wetherbeei_contig20644.1.1 ID=prot_P-wetherbeei_contig20644.1.1|Name=mRNA_P-wetherbeei_contig20644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp
CAACISLRIPVDSFRPNKNQRQIWKRNQDIEVTVGPAIFSQEKYELYKLY
QEQRWKKESTLTPEAFSECYLQQPGQGLDFTYRLEGKLVGVGWVDATSKG
SSSVYFVWDCDPKRSLGIYSVLYEIEWARQTGREAVYLGLYVDGCDSMRY
KASFHPHQRRYRNGEWMDQPAEGWPAPPDPRAPRPTKENQSVL*
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mRNA from alignment at P-wetherbeei_contig20644:2..583+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20644.1.1 ID=mRNA_P-wetherbeei_contig20644.1.1|Name=mRNA_P-wetherbeei_contig20644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig20644:2..583+ (Phaeothamnion wetherbeei SAG_119_79)
TGTGCCGCCTGTATTTCCCTGCGGATCCCCGTGGACAGCTTCCGGCCCAA CAAAAACCAGCGCCAGATCTGGAAGCGCAATCAGGACATCGAAGTCACCG TGGGGCCGGCCATTTTCTCGCAGGAGAAATACGAGCTCTACAAGCTCTAC CAGGAGCAGCGCTGGAAGAAAGAGTCCACGCTAACCCCTGAGGCCTTCAG TGAGTGTTACCTCCAGCAGCCCGGGCAGGGCCTCGATTTCACGTATCGGC TTGAGGGCAAATTGGTGGGCGTCGGGTGGGTCGACGCGACCAGCAAGGGC TCGTCCTCGGTTTACTTCGTCTGGGATTGCGATCCCAAGCGCAGCCTGGG CATTTACTCCGTGCTCTACGAGATCGAGTGGGCTCGCCAGACGGGCCGCG AGGCTGTGTATCTCGGCTTGTATGTAGACGGATGCGATTCCATGCGCTAT AAAGCTTCTTTTCATCCTCATCAGCGGCGCTATCGCAATGGCGAATGGAT GGACCAGCCAGCCGAGGGGTGGCCGGCTCCTCCCGACCCCCGTGCGCCCA GACCAACGAAGGAAAATCAAAGCGTATTATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20644:2..583+

>mRNA_P-wetherbeei_contig20644.1.1 ID=mRNA_P-wetherbeei_contig20644.1.1|Name=mRNA_P-wetherbeei_contig20644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig20644:2..583+ (Phaeothamnion wetherbeei SAG_119_79)
TGTGCCGCCTGTATTTCCCTGCGGATCCCCGTGGACAGCTTCCGGCCCAA
CAAAAACCAGCGCCAGATCTGGAAGCGCAATCAGGACATCGAAGTCACCG
TGGGGCCGGCCATTTTCTCGCAGGAGAAATACGAGCTCTACAAGCTCTAC
CAGGAGCAGCGCTGGAAGAAAGAGTCCACGCTAACCCCTGAGGCCTTCAG
TGAGTGTTACCTCCAGCAGCCCGGGCAGGGCCTCGATTTCACGTATCGGC
TTGAGGGCAAATTGGTGGGCGTCGGGTGGGTCGACGCGACCAGCAAGGGC
TCGTCCTCGGTTTACTTCGTCTGGGATTGCGATCCCAAGCGCAGCCTGGG
CATTTACTCCGTGCTCTACGAGATCGAGTGGGCTCGCCAGACGGGCCGCG
AGGCTGTGTATCTCGGCTTGTATGTAGACGGATGCGATTCCATGCGCTAT
AAAGCTTCTTTTCATCCTCATCAGCGGCGCTATCGCAATGGCGAATGGAT
GGACCAGCCAGCCGAGGGGTGGCCGGCTCCTCCCGACCCCCGTGCGCCCA
GACCAACGAAGGAAAATCAAAGCGTATTATGA
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