mRNA_P-wetherbeei_contig2058.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A835Z550_9STRA (Dynein light chain flagellar outer dynein arm light chain LC1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z550_9STRA) HSP 1 Score: 296 bits (758), Expect = 4.570e-100 Identity = 148/197 (75.13%), Postives = 170/197 (86.29%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAADPNAL 594
TTC+QA+K WEAKN AEEAP+VKLY Q+PPIAKLDNSLNTLKNCEHLSLSTN+IDRLIPLAGMK+LRILSLGRN +K+ IEKL+D ADTLEELWLSYNQI +L+GLG LA+LTTLY+SNN +KSW+ELD+L L HLRDV FVGNPIY E +RE+AR+EVLRH+PQV+KIDGDMV+PSEREAA AL
Sbjct: 2 TTCAQAIKTWEAKNEAVAEEAPVVKLYCQLPPIAKLDNSLNTLKNCEHLSLSTNSIDRLIPLAGMKRLRILSLGRNVLKR--------IEKLEDVADTLEELWLSYNQITSLEGLGALASLTTLYVSNNNIKSWAELDRLQALTHLRDVTFVGNPIYGEMSREDARVEVLRHVPQVAKIDGDMVRPSEREAAGLEAL 190
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: D7FPX7_ECTSI (Dynein light chain flagellar outer dynein arm light chain LC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX7_ECTSI) HSP 1 Score: 295 bits (756), Expect = 9.540e-100 Identity = 148/199 (74.37%), Postives = 170/199 (85.43%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAADPNALIA 600
TTCSQA+K WEAKN SAEEA +VKLY QMPPIAKLDNSLN+LKNCE LSLSTN IDR+IPLAGMKKL+ILSLGRN IKK IEKLDD A++LEELW+SYNQ+ TLDGL NL+NLT LY+SNN VKSW+ELDKL LE L DVLF+GNPIY+ ++E+ARIEVLRH+PQVSKIDGDMVKP+ER+AA+P A+ A
Sbjct: 2 TTCSQAIKNWEAKNEASAEEATVVKLYCQMPPIAKLDNSLNSLKNCEQLSLSTNCIDRIIPLAGMKKLKILSLGRNCIKK--------IEKLDDVAESLEELWISYNQVTTLDGLSNLSNLTRLYMSNNSVKSWAELDKLTGLEELTDVLFMGNPIYEGMSKEDARIEVLRHIPQVSKIDGDMVKPTERDAANPEAVAA 192
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A812XNK2_SYMMI (LC1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XNK2_SYMMI) HSP 1 Score: 270 bits (691), Expect = 7.510e-90 Identity = 135/193 (69.95%), Postives = 160/193 (82.90%), Query Frame = 1
Query: 1 QTTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
QTTC+QALK WEA NG +AEEA +KLY Q+PPI K+D+SLN L+NCE L+LSTNAIDR+IPLAGM L+ILSLGRN IKK IEKLDD A TLEELW+SYNQIN+LDG+ L NL LY+SNN +K+W+ELDKLA L +LRDVLFVGNPIYD+ +RE+ARIEVL+ +PQV+KIDGDMVKP+ERE A
Sbjct: 2 QTTCAQALKNWEAANGTAAEEADYIKLYCQVPPIVKMDSSLNALRNCERLALSTNAIDRIIPLAGMSSLKILSLGRNQIKK--------IEKLDDVASTLEELWVSYNQINSLDGVNVLTNLAVLYISNNLIKNWAELDKLAGLPNLRDVLFVGNPIYDDMSREQARIEVLKRIPQVAKIDGDMVKPAERELA 186
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A7S3K2Z4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Z4_9STRA) HSP 1 Score: 222 bits (566), Expect = 8.450e-71 Identity = 115/193 (59.59%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRL-IPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC+ A+K++E K+G +A EA IVKLY Q+PPI KLD SLN L CEHL LSTN+ID++ I L G+K L+ILSLGRN IKK IE+LDD A+ LEELW+SYNQI++LDGL +L NLTTL++SNN +K+++EL+KLA L +L+DVLF GNP+Y+ + +EARIEVL+ LP ++KIDG MV S+R+ A
Sbjct: 3 TTCAAAIKSFEQKSGENAAEAKIVKLYGQIPPITKLDASLNNLTACEHLQLSTNSIDKISIALTGLKNLKILSLGRNVIKK--------IERLDDLAENLEELWISYNQISSLDGLSSLTNLTTLFISNNAIKNFAELEKLACLPNLKDVLFYGNPMYEGLSAQEARIEVLKRLPNIAKIDGSMVLQSDRDEA 187
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: B8C6D5_THAPS (Leucine-rich repeat protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6D5_THAPS) HSP 1 Score: 218 bits (556), Expect = 2.880e-69 Identity = 121/196 (61.73%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 4 TTCSQALKAWEA--KNGCSAEEAPIVKLYAQMPPIAKLDNS-LNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDE-KTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC+QA+K WEA KN S EEA V L Q PPI KLD LN LK C+ LSLSTN I+R+I L GM +L+ILS+GRN IKK IEKL+D A +L++LW+SYNQI++LDGL + LTTLY SNN +KS+SELDKL E LRDVLF+GNP+Y E T+EEARIE+LRHLP + KIDG+ VKPSE EAA
Sbjct: 2 TTCAQAIKNWEANPKNEGSVEEATEVSLCFQAPPITKLDAKVLNNLKKCQKLSLSTNMIERMISLTGMSELKILSIGRNNIKK--------IEKLEDVASSLQQLWISYNQISSLDGLACVTGLTTLYCSNNLIKSFSELDKLKANEQLRDVLFIGNPMYSEVATKEEARIEILRHLPNLKKIDGEFVKPSELEAA 189
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A2D4CDP6_PYTIN (Dynein light chain 1, axonemal n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CDP6_PYTIN) HSP 1 Score: 208 bits (530), Expect = 1.970e-65 Identity = 116/192 (60.42%), Postives = 131/192 (68.23%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC+QA+KAWEAKNG SAEEA I+KLY Q+PPI KLDNSLNTLKNCE LSLSTN+IDRLIPL+GMKKLRILSLGRN IKK IEKLDD ADTL KLA L LRDVLFVGNPIYD ++EEARI+VL+ +P+V+KIDGDMVK +ER+AA
Sbjct: 2 TTCAQAIKAWEAKNGTSAEEATIIKLYCQIPPINKLDNSLNTLKNCEQLSLSTNSIDRLIPLSGMKKLRILSLGRNQIKK--------IEKLDDVADTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLASLPKLRDVLFVGNPIYDNMSKEEARIQVLKRIPKVAKIDGDMVKQTERDAA 185
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: F0Y145_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y145_AURAN) HSP 1 Score: 208 bits (530), Expect = 2.640e-65 Identity = 111/197 (56.35%), Postives = 145/197 (73.60%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCE----HLSLSTNAIDRL-IPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC+ A+K +E K G +A +A IVKLY Q+PPIAKLD+SLN L CE HL LSTN ID++ + G+K L+ILSLGRN IKK IEKLDD D+LEELW+SYNQI+ L+GL + LTTLY+SNN +K+++EL+K+A L +L+DVLFVGNP+Y+ T E+RIE+LR LP ++KIDG MV +R+ A
Sbjct: 2 TTCAAAIKKFEEKTGETASDAKIVKLYCQIPPIAKLDSSLNNLAACERAAAHLQLSTNNIDKIGLAFTGLKNLKILSLGRNVIKK--------IEKLDDLGDSLEELWISYNQISALEGLHAMTKLTTLYMSNNNLKNFAELEKIAGLPNLKDVLFVGNPMYEGLTAAESRIEILRRLPNLAKIDGSMVLQRDRDEA 190
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A1V9ZTY7_9STRA (Leucine-rich repeat protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTY7_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.150e-64 Identity = 113/191 (59.16%), Postives = 129/191 (67.54%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREA 576
TTCSQA+KAWEAK S+EEAP+VKLY Q+PPIAKLDNSLNTLKNCEHLSLSTN+IDRLIPL+GMKKLRILSLGRN IKK IEKLDD +DTLEELW L+ L LRDVLF GNPIY+ ++EEAR+ VL+ L + KIDGDMVK +ER+A
Sbjct: 22 TTCSQAIKAWEAKENASSEEAPVVKLYCQIPPIAKLDNSLNTLKNCEHLSLSTNSIDRLIPLSGMKKLRILSLGRNQIKK--------IEKLDDVSDTLEELWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNLPKLRDVLFAGNPIYEGLSKEEARLNVLKRLRNLMKIDGDMVKQTERDA 204
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A7S2SA92_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SA92_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.840e-63 Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNS-LNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC++A++ +E K+G A E V LY Q+PPI K++ + L++L CEHL+LSTN IDR+ ++ + LR+LSLGRN IKK IEKLD+ A +L+ELWLSYNQI TLDG+ +L NLTTLYLSNN + WSELDKL L L+D+L +GNPIY+ + RI+VL+H+P + KIDGDM+KPSERE A
Sbjct: 12 TTCAKAIQNFEQKSGGPAVEQAKVLLYGQIPPIKKMEPAALSSLSACEHLALSTNQIDRIEAIS-LPNLRVLSLGRNMIKK--------IEKLDELAGSLQELWLSYNQIKTLDGVASLENLTTLYLSNNLISEWSELDKLTSLPQLKDILLLGNPIYEGLEEHDRRIQVLQHIPGLMKIDGDMIKPSEREEA 195
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Match: A0A7S2CV89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CV89_9STRA) HSP 1 Score: 202 bits (513), Expect = 8.810e-63 Identity = 112/192 (58.33%), Postives = 126/192 (65.62%), Query Frame = 1
Query: 4 TTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLSLSTNAIDRLIPLAGMKKLRILSLGRNAIKKASGIHLSLIEKLDDAADTLEELWLSYNQINTLDGLGNLANLTTLYLSNNKVKSWSELDKLAPLEHLRDVLFVGNPIYDEKTREEARIEVLRHLPQVSKIDGDMVKPSEREAA 579
TTC+QA+K WE +G A EA VKLY Q+PPI KLDN+LN+L NCE L++STNAIDRLIPL GMK L++LSLGRN IKK IEKLDD ADTLEELW W KLA L LRDVLFVGNPIY+ T+EEARIEVL+HLP V KIDGD+VKPSER AA
Sbjct: 3 TTCAQAIKNWETTSGEVAAEATHVKLYCQIPPILKLDNALNSLVNCERLAISTNAIDRLIPLNGMKSLKVLSLGRNQIKK--------IEKLDDVADTLEELWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXKLAGLSGLRDVLFVGNPIYEGLTKEEARIEVLKHLPNVMKIDGDLVKPSERAAA 186 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2058.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2058.1.2 >prot_P-wetherbeei_contig2058.1.2 ID=prot_P-wetherbeei_contig2058.1.2|Name=mRNA_P-wetherbeei_contig2058.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp QTTCSQALKAWEAKNGCSAEEAPIVKLYAQMPPIAKLDNSLNTLKNCEHLback to top mRNA from alignment at P-wetherbeei_contig2058:293..1118+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2058.1.2 ID=mRNA_P-wetherbeei_contig2058.1.2|Name=mRNA_P-wetherbeei_contig2058.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=826bp|location=Sequence derived from alignment at P-wetherbeei_contig2058:293..1118+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2058:293..1118+ >mRNA_P-wetherbeei_contig2058.1.2 ID=mRNA_P-wetherbeei_contig2058.1.2|Name=mRNA_P-wetherbeei_contig2058.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig2058:293..1118+ (Phaeothamnion wetherbeei SAG_119_79)back to top |