mRNA_P-wetherbeei_contig20578.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20578.1.1
Unique NamemRNA_P-wetherbeei_contig20578.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A7C7Y3X8_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7Y3X8_9GAMM)

HSP 1 Score: 262 bits (670), Expect = 1.800e-86
Identity = 120/197 (60.91%), Postives = 144/197 (73.10%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M R+ ++ G SPHFIG+W +    L D I++FFE+H E Q PG SA G N E KNS DI V+PRDL  P +  + EY+N L A Y DYLK +PFLA  +   DIG FN+Q+Y PGGHF L HSERTA+    RVL WMTYLNDVEDGG T F +  LE++PERGKTLIWPAEWTH+H GN+V++G KYIITGWMHFP
Sbjct:    1 MNRISVE-GSSPHFIGSWNIEQNLLCDEIVNFFETHQEKQEPGQSAGGVNLESKNSTDITVHPRDLELPEYKSVKEYINCLYACYEDYLKQFPFLASTMPRTDIGSFNVQKYLPGGHFKLPHSERTAIVNSFRVLAWMTYLNDVEDGGSTSFVHQDLEIQPERGKTLIWPAEWTHAHLGNIVNSGEKYIITGWMHFP 196          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A349KIH7_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349KIH7_9GAMM)

HSP 1 Score: 258 bits (659), Expect = 8.490e-85
Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFPLK 600
            MQR++IQ G SPHFIG W +    L D +I+FF +H + Q PG SA G +   K S DI V+PRDL  P H+ + EYM+ L   Y DYL+ +PFL   +R VD+G FNIQRY PGGHF LEHSERT++    RVLVWMTYLNDV DGG T F +  LEV+P++GKTLIWPAEWTH+H GN++++G KYIITGWMHFP +
Sbjct:    1 MQRIDIQ-GSSPHFIGCWNIEKDSLCDDLIEFFITHGDSQEPGQSAGGVDHNAKKSTDITVHPRDLELPDHSPVKEYMDALYGCYNDYLRQFPFLDSIMRRVDVGSFNIQRYLPGGHFKLEHSERTSIINSFRVLVWMTYLNDVTDGGSTTFTHQDLEVQPQKGKTLIWPAEWTHAHRGNILNSGEKYIITGWMHFPQE 198          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A349E9I0_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349E9I0_9GAMM)

HSP 1 Score: 254 bits (650), Expect = 2.050e-83
Identity = 110/198 (55.56%), Postives = 142/198 (71.72%), Query Frame = 1
Query:    4 MQRVEI-QTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R+EI + G  PHFIG+W L    L D +I FFE+ PE    G +A G N + KNS D+ + PRDL  P H  + +Y+  L A ++DYL+ WPFL   +  VDIG FN+QRY PGGHF+  HSERT + T HR+L WMTYLNDV DGG T+F +  LE++P++G+TLIWPAEWTH+H GNVV++G KY+ITGWMHFP
Sbjct:    1 MKRIEIDKPGADPHFIGSWTLERLALCDELITFFETQPENHTKGQTASGLNTQSKNSTDLAIRPRDLQSPDHQPVRDYIEALFACHKDYLEQWPFLKDIIPTVDIGSFNLQRYDPGGHFSKVHSERTTIDTSHRILAWMTYLNDVSDGGSTQFEHQNLEIQPQKGRTLIWPAEWTHAHRGNVVNSGVKYVITGWMHFP 198          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E0N7X2_9GAMM (2OG-Fe(II) oxygenase n=7 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2E0N7X2_9GAMM)

HSP 1 Score: 250 bits (638), Expect = 2.500e-81
Identity = 112/199 (56.28%), Postives = 137/199 (68.84%), Query Frame = 1
Query:    1 TMQRVEIQTGLS-PHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            T+QR+EI      PHFIGAW +    L D +I FFE+HP+ Q  G  A G N E K S D+ + PR+L Q  H  + +Y++ L A Y DYL+ WPFL G +  +++  FNIQRY PGGHF   HSERT L T HRVL WMTYLNDVEDGG T F    +EV+P RGKTLIWPAEWTH+H  NV+++G KYIITGW+HFP
Sbjct:   16 TVQRIEISASAEIPHFIGAWTIEPLSLCDELIAFFEAHPDNQSQGKIAGGLNTESKQSTDLTIRPRELQQSDHLPVRDYLDALFACYTDYLEQWPFLKGVMPSMELSSFNIQRYQPGGHFLKLHSERTTLATSHRVLAWMTYLNDVEDGGSTEFVQQSIEVQPSRGKTLIWPAEWTHAHRANVLNSGAKYIITGWIHFP 214          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E4K144_9GAMM (2OG-Fe(II) oxygenase n=6 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4K144_9GAMM)

HSP 1 Score: 249 bits (636), Expect = 2.850e-81
Identity = 112/197 (56.85%), Postives = 144/197 (73.10%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R+EI+ G SPHFIG+W +    + D +I+FFE+H E   PG SA G N E KNS D+ ++PRDL +P +  +  Y++ L  F++DYLK +PFLA  L  VD+  FNIQRY  GGHF  EH+ERT++    RVLVWMTYLNDV DGG T F +  L+V+P +G+TLIWPAEWTHSHTG+V++ G KYIITGWMHFP
Sbjct:    1 MKRIEIE-GSSPHFIGSWQIEQESICDALIEFFENHQEKHEPGASAGGVNVETKNSTDVTIHPRDLKKPEYESVKAYIDVLYDFHKDYLKQFPFLASILPRVDLSSFNIQRYLSGGHFKQEHTERTSIVNSFRVLVWMTYLNDVIDGGCTTFAHQNLKVQPTKGRTLIWPAEWTHSHTGDVLNTGKKYIITGWMHFP 196          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E9JHA2_9GAMM (2OG-Fe(II) oxygenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JHA2_9GAMM)

HSP 1 Score: 248 bits (634), Expect = 5.380e-81
Identity = 110/197 (55.84%), Postives = 144/197 (73.10%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R+EIQ G SP FIG W +    + D +++FFE+H   Q  G SA G   + KNS D+ ++PRDL  P +  +  Y++ L  F++DYL+ +PFLA  +   D+  FNIQ+Y PGGHF LEHSERTA+   HRVLVW+TYLNDVEDGG T F +  L+V+PE+GKT+IWPAEWTHSHTG+V+++GTKYI TGWMHFP
Sbjct:    1 MKRIEIQ-GSSPLFIGCWKIEPESICDGVVEFFETHQYKQEAGQSAGGVTVDDKNSTDMTIHPRDLKLPEYEPVKAYIDILYEFFKDYLEQFPFLASIMPRADVSSFNIQKYLPGGHFKLEHSERTAIINSHRVLVWLTYLNDVEDGGTTTFTHQNLQVQPEKGKTVIWPAEWTHSHTGDVLNSGTKYICTGWMHFP 196          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E1ZQC5_9GAMM (2OG-Fe(II) oxygenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZQC5_9GAMM)

HSP 1 Score: 248 bits (634), Expect = 5.380e-81
Identity = 112/197 (56.85%), Postives = 139/197 (70.56%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R+ ++ G SPHFIG W +    L D I+DFFESH E Q PG SA   N E KNS DI V+PRDL    + V+  Y++ L A Y+DY + +PFL   +   D+G FNIQ+Y PGGHF L HSERT++    RVL WM+YLNDVEDGG T F +  +EV P +GKTLIWPAEWTH+H GN+V++G KYIITGWMHFP
Sbjct:    1 MKRISLE-GPSPHFIGCWNIXQNVLCDDIVDFFESHQEKQEPGQSAGAVNLEAKNSTDITVHPRDLKTEEYQVVKNYIDTLFACYKDYTEQFPFLGTIMPSADVGSFNIQKYLPGGHFKLPHSERTSIVNSFRVLAWMSYLNDVEDGGATTFTHQNMEVTPRKGKTLIWPAEWTHAHLGNIVNSGEKYIITGWMHFP 196          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E8F945_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8F945_9GAMM)

HSP 1 Score: 243 bits (619), Expect = 1.100e-78
Identity = 106/200 (53.00%), Postives = 142/200 (71.00%), Query Frame = 1
Query:    4 MQRVEIQTGL-SPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFPLK 600
            M+R++I T    PHFIG+WF+  + L D +++FFE+HP+ Q  G +A G N E K S D+ + PRDL Q  H  + EY++ L   ++DYL+ WPFL   +   + G FNIQRY  GGHF   H+ERT + T HRVL WMTYLNDVEDGG T F ++ L+V+P++GKT+IWPAEWTH+H  NVV++G KYI TGWM+FPL+
Sbjct:    1 MKRIDIPTSPPGPHFIGSWFIEPKSLCDDLVNFFETHPDNQTEGKTAGGLNVESKQSTDLAIRPRDLEQADHKPVREYLDALFDCHKDYLEQWPFLKDIMGRAEFGTFNIQRYHLGGHFLKTHAERTTISTSHRVLAWMTYLNDVEDGGSTYFVHHDLDVQPQKGKTMIWPAEWTHAHFANVVNSGKKYIATGWMNFPLE 200          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2A5B7T5_9GAMM (2OG-Fe(II) oxygenase n=2 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5B7T5_9GAMM)

HSP 1 Score: 241 bits (616), Expect = 3.030e-78
Identity = 107/198 (54.04%), Postives = 134/198 (67.68%), Query Frame = 1
Query:    4 MQRVEIQTGL-SPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R++++    SPHFIG+W +    + D +I FFE+H      G +A G N E KNS D+ + PR+L  P H  L  Y+  L   Y+DYL+ WPFL   L    IG FNIQ+Y PGGHF+  HSERT + T HRVL WMTYLNDV+DGG T F +   E +PE+GKTLIWP EWTH+H GNVV++G KYIITGWMHFP
Sbjct:    1 MKRIDLELSKPSPHFIGSWNIEPLSICDELIHFFETHTANHTKGRTAGGLNTESKNSTDLTIRPRELELPDHEPLRNYIELLFGCYKDYLEQWPFLGSILPNTQIGSFNIQKYEPGGHFSKVHSERTTIDTSHRVLAWMTYLNDVKDGGSTYFEHQDFESQPEKGKTLIWPGEWTHAHRGNVVNSGVKYIITGWMHFP 198          
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Match: A0A2E7DK33_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7DK33_9GAMM)

HSP 1 Score: 241 bits (615), Expect = 4.160e-78
Identity = 107/197 (54.31%), Postives = 138/197 (70.05%), Query Frame = 1
Query:    4 MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHNPEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLREVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRTRFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFP 594
            M+R+ ++ G  PHFIG W +    L D +++FFESH E    G SA G + E K+S+DI V+PRDL    + ++  Y++ L   Y+DY + +PFL   L   DIG FNIQ+Y PGGHF L HSERT++    R L WM+YLNDVEDGG T F +  +EVKPE+GKTLIWPAEWTH+H GN+V++G KYIITGWMHFP
Sbjct:    1 MKRINLE-GPDPHFIGCWDIEQNSLCDELVNFFESHEEKHEAGKSAGGVDLEAKSSIDIAVHPRDLKTDEYKIIKGYIDFLFVCYKDYTEQFPFLGSILPNTDIGSFNIQKYLPGGHFKLPHSERTSIQNSFRALAWMSYLNDVEDGGTTIFTHQNMEVKPEKGKTLIWPAEWTHAHAGNIVNSGEKYIITGWMHFP 196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20578.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C7Y3X8_9GAMM1.800e-8660.912OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria b... [more]
A0A349KIH7_9GAMM8.490e-8558.792OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria b... [more]
A0A349E9I0_9GAMM2.050e-8355.562OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria b... [more]
A0A2E0N7X2_9GAMM2.500e-8156.282OG-Fe(II) oxygenase n=7 Tax=unclassified Gammapro... [more]
A0A2E4K144_9GAMM2.850e-8156.852OG-Fe(II) oxygenase n=6 Tax=Gammaproteobacteria b... [more]
A0A2E9JHA2_9GAMM5.380e-8155.842OG-Fe(II) oxygenase n=2 Tax=Gammaproteobacteria b... [more]
A0A2E1ZQC5_9GAMM5.380e-8156.852OG-Fe(II) oxygenase n=2 Tax=Gammaproteobacteria T... [more]
A0A2E8F945_9GAMM1.100e-7853.002OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria b... [more]
A0A2A5B7T5_9GAMM3.030e-7854.042OG-Fe(II) oxygenase n=2 Tax=SAR86 cluster bacteri... [more]
A0A2E7DK33_9GAMM4.160e-7854.312OG-Fe(II) oxygenase n=1 Tax=Gammaproteobacteria b... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20578contigP-wetherbeei_contig20578:435..1049 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog314607.KB13_260
PFAMs2OG-FeII_Oxy_3
Model size615
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.14e-65
EggNOG OGsCOG3751@1|root,COG3751@2|Bacteria,1RBXB@1224|Proteobacteria
DescriptionSMART Prolyl 4-hydroxylase, alpha subunit
Cds size612
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186203.2682788-UTR-P-wetherbeei_contig20578:434..4371683186203.2682788-UTR-P-wetherbeei_contig20578:434..437Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20578 435..437 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186203.2769353-CDS-P-wetherbeei_contig20578:437..10491683186203.2769353-CDS-P-wetherbeei_contig20578:437..1049Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20578 438..1049 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20578.1.1prot_P-wetherbeei_contig20578.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20578 438..1049 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20578.1.1

>prot_P-wetherbeei_contig20578.1.1 ID=prot_P-wetherbeei_contig20578.1.1|Name=mRNA_P-wetherbeei_contig20578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp
MQRVEIQTGLSPHFIGAWFLPDRGLADRIIDFFESHPELQRPGMSAVGHN
PEFKNSVDINVNPRDLAQPSHAVLAEYMNELSAFYRDYLKDWPFLAGFLR
EVDIGDFNIQRYTPGGHFALEHSERTALPTLHRVLVWMTYLNDVEDGGRT
RFPNYGLEVKPERGKTLIWPAEWTHSHTGNVVDAGTKYIITGWMHFPLKP
ARA*
back to top

mRNA from alignment at P-wetherbeei_contig20578:435..1049+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20578.1.1 ID=mRNA_P-wetherbeei_contig20578.1.1|Name=mRNA_P-wetherbeei_contig20578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig20578:435..1049+ (Phaeothamnion wetherbeei SAG_119_79)
ACGATGCAGCGCGTTGAAATTCAAACCGGTCTCAGCCCACACTTCATTGG CGCGTGGTTCCTGCCGGACCGCGGCCTGGCGGACCGGATCATCGATTTTT TCGAATCCCATCCCGAATTGCAGCGTCCGGGCATGTCGGCGGTGGGGCAC AACCCGGAATTCAAGAACTCGGTGGACATCAACGTCAATCCGCGCGACCT GGCGCAACCATCGCATGCGGTGCTGGCCGAGTACATGAACGAACTGTCGG CCTTTTATCGAGACTATCTCAAGGACTGGCCGTTTCTCGCCGGCTTCCTG CGCGAGGTGGACATCGGCGATTTCAATATCCAGCGCTATACGCCGGGCGG CCATTTCGCACTCGAGCACTCCGAACGCACCGCCTTGCCGACACTGCACC GGGTGCTGGTATGGATGACATACCTGAACGACGTCGAGGACGGCGGCCGC ACCCGTTTTCCCAACTATGGGCTGGAAGTCAAGCCGGAACGCGGCAAGAC CCTGATCTGGCCGGCTGAATGGACGCATTCGCATACCGGCAACGTGGTCG ACGCCGGCACCAAGTACATCATCACCGGCTGGATGCATTTCCCGCTCAAG CCTGCCCGGGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20578:435..1049+

>mRNA_P-wetherbeei_contig20578.1.1 ID=mRNA_P-wetherbeei_contig20578.1.1|Name=mRNA_P-wetherbeei_contig20578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=612bp|location=Sequence derived from alignment at P-wetherbeei_contig20578:435..1049+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCGCGTTGAAATTCAAACCGGTCTCAGCCCACACTTCATTGGCGC
GTGGTTCCTGCCGGACCGCGGCCTGGCGGACCGGATCATCGATTTTTTCG
AATCCCATCCCGAATTGCAGCGTCCGGGCATGTCGGCGGTGGGGCACAAC
CCGGAATTCAAGAACTCGGTGGACATCAACGTCAATCCGCGCGACCTGGC
GCAACCATCGCATGCGGTGCTGGCCGAGTACATGAACGAACTGTCGGCCT
TTTATCGAGACTATCTCAAGGACTGGCCGTTTCTCGCCGGCTTCCTGCGC
GAGGTGGACATCGGCGATTTCAATATCCAGCGCTATACGCCGGGCGGCCA
TTTCGCACTCGAGCACTCCGAACGCACCGCCTTGCCGACACTGCACCGGG
TGCTGGTATGGATGACATACCTGAACGACGTCGAGGACGGCGGCCGCACC
CGTTTTCCCAACTATGGGCTGGAAGTCAAGCCGGAACGCGGCAAGACCCT
GATCTGGCCGGCTGAATGGACGCATTCGCATACCGGCAACGTGGTCGACG
CCGGCACCAAGTACATCATCACCGGCTGGATGCATTTCCCGCTCAAGCCT
GCCCGGGCCTGA
back to top