mRNA_P-wetherbeei_contig20555.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20555.1.1
Unique NamemRNA_P-wetherbeei_contig20555.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A127F3Z8_9HYPH (Elongation factor 4 n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A127F3Z8_9HYPH)

HSP 1 Score: 726 bits (1875), Expect = 3.390e-260
Identity = 363/405 (89.63%), Postives = 387/405 (95.56%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVYHA+DAGHEIVPVLNKVDLPAAEPE VKKQIEDVIG+DASNA+MISAKTG  VP+VLEAIVTRLPPPKGDR+ATLKALLVDSWYDAYLGVVVLVRIVDG L+KGQR+RMMGTNA+Y+VDR GVF PKLTPV+ELGPGEIG +TAAIKEVADTRVGDTITDDRKPV E LPGF+PAIPVVFCGLFP+DAA FEDLRAAMG+LRLNDASFS+EMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKM LR+G +IEIHNPVDMPD M+ILEI EPWIEATILTPD+YLG+VLKLCQDRRG+QVELTYVGTRAM KYNLPLNEVVFDFYDRLKSVSKGYASFDYHLT+YREADLVKMSILVN+E VDALSMLVHR+RAEQRGR MV KLKE
Sbjct:  118 LANVYHAIDAGHEIVPVLNKVDLPAAEPEAVKKQIEDVIGIDASNALMISAKTGLGVPDVLEAIVTRLPPPKGDRNATLKALLVDSWYDAYLGVVVLVRIVDGTLKKGQRVRMMGTNAAYDVDRVGVFRPKLTPVDELGPGEIGYLTAAIKEVADTRVGDTITDDRKPVSEMLPGFKPAIPVVFCGLFPIDAAAFEDLRAAMGRLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMNLRDGSQIEIHNPVDMPDPMKILEIQEPWIEATILTPDEYLGSVLKLCQDRRGQQVELTYVGTRAMAKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTDYREADLVKMSILVNEESVDALSMLVHRSRAEQRGRAMVEKLKE 522          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A0Q7TL55_9HYPH (Elongation factor 4 n=3 Tax=Pseudolabrys TaxID=556257 RepID=A0A0Q7TL55_9HYPH)

HSP 1 Score: 707 bits (1826), Expect = 1.030e-252
Identity = 353/405 (87.16%), Postives = 381/405 (94.07%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVYHALDAGHEIVPVLNK+DLPAAEPE++KKQIEDVIGLDAS+A+ ISAKTG N+ +VLEAIVT+LPPPKGDRDA LKALLVDSWYDAYLGVVVLVR+VDG L+KGQRIRM+G  A YEVDR GVF PKLTPV+ELGPGEIG +TA+IKEVADTRVGDTITD+R P  +PLPGF+PAIPVVFCGLFPVDAA FE LRAAMGKLRLNDASF++EMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKM LR+G +IE+HNPVDMPDVMQILEI EPWIEATILTPD+YLGAVLKLCQDRRG Q ELTYVG+RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT+Y+ +DLVKMSILVNDEPVDALSMLVHRTRAE RGRGMV KLKE
Sbjct:  120 LANVYHALDAGHEIVPVLNKIDLPAAEPEKIKKQIEDVIGLDASDAIGISAKTGLNIDQVLEAIVTKLPPPKGDRDAPLKALLVDSWYDAYLGVVVLVRVVDGALKKGQRIRMIGIEAHYEVDRVGVFLPKLTPVDELGPGEIGMLTASIKEVADTRVGDTITDERNPNDDPLPGFQPAIPVVFCGLFPVDAADFEALRAAMGKLRLNDASFTFEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMNLRDGSQIELHNPVDMPDVMQILEIEEPWIEATILTPDEYLGAVLKLCQDRRGTQKELTYVGSRAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDYKVSDLVKMSILVNDEPVDALSMLVHRTRAESRGRGMVEKLKE 524          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A537L6S7_9PROT (Elongation factor 4 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L6S7_9PROT)

HSP 1 Score: 707 bits (1825), Expect = 1.460e-252
Identity = 356/405 (87.90%), Postives = 381/405 (94.07%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVYHA+DAGHEIVPVLNKVDLPA+EPE+VK+QIEDVIGLDAS A+ ISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYD YLGVVVLVRIVDG L+KGQRIRMMGTNA+Y+VDR GVFTPKL   +ELGPGEIG +TA+IKEVADTRVGDTITDDRKPV   LPGF+PAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFS+EMETSAALGFGFRCGFLGLLHLEIIQERL+REFNL+LIATAPSVIYKMKLRNG EI+IHNPVDMPD M ILEI EPWIEATILTPD+YLG+VLKLCQDRRG Q ELTYVG+RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT+++ ADLVKM ILVN EPVDAL+MLVH+TRAE RGR MV KLKE
Sbjct:  120 LANVYHAIDAGHEIVPVLNKVDLPASEPEKVKQQIEDVIGLDASQAIEISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDLYLGVVVLVRIVDGRLKKGQRIRMMGTNAAYDVDRVGVFTPKLLLADELGPGEIGFLTASIKEVADTRVGDTITDDRKPVDAMLPGFKPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLQREFNLELIATAPSVIYKMKLRNGTEIQIHNPVDMPDPMAILEIDEPWIEATILTPDEYLGSVLKLCQDRRGAQKELTYVGSRAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDFKPADLVKMQILVNGEPVDALAMLVHKTRAESRGRAMVEKLKE 524          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A1Q4DCB7_9HYPH (Elongation factor 4 n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DCB7_9HYPH)

HSP 1 Score: 699 bits (1803), Expect = 3.240e-249
Identity = 350/405 (86.42%), Postives = 378/405 (93.33%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY ALD GHEIVPVLNK+DLPAAEP+++K+QIEDVIGLDAS+AVMISAKTG  + +VLEAIVTRLPPPKGDRDA LKALLVDSWYDAYLGVVVLVR+VDG L+KGQRI MMGT+A+YEVDR GVFTPKL  V ELGPGEIG +TA+IKEVADTRVGDTITD++KPV EPL GFRPA+PVVFCGLFPVDAA FEDLRAAMGKLRLNDASFS+EME+SAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKM LR+G  IEIHNPVDMPDVMQILEI EPWIEATILTPD+YLG+VLKLCQDRRGEQ+ELTYVG+RAM KY LPLNEVVFDFYDRLKSVS+GYASFDYHLT+YR +DLVKM ILVN EPVDALSMLVHR+RAEQRGR MV KLKE
Sbjct:  120 LANVYQALDNGHEIVPVLNKIDLPAAEPDKIKQQIEDVIGLDASDAVMISAKTGIGIGDVLEAIVTRLPPPKGDRDAPLKALLVDSWYDAYLGVVVLVRVVDGTLKKGQRILMMGTDATYEVDRVGVFTPKLAQVAELGPGEIGMLTASIKEVADTRVGDTITDEKKPVAEPLSGFRPAVPVVFCGLFPVDAAAFEDLRAAMGKLRLNDASFSFEMESSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMALRDGSHIEIHNPVDMPDVMQILEIQEPWIEATILTPDEYLGSVLKLCQDRRGEQLELTYVGSRAMAKYALPLNEVVFDFYDRLKSVSRGYASFDYHLTDYRASDLVKMQILVNAEPVDALSMLVHRSRAEQRGRAMVEKLKE 524          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A6L5FEN9_9HYPH (Elongation factor 4 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FEN9_9HYPH)

HSP 1 Score: 697 bits (1798), Expect = 1.860e-248
Identity = 349/405 (86.17%), Postives = 375/405 (92.59%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY ALD  HE+VPVLNKVDLPAAEP++VK+QIEDVIGLDAS+A++ISAKTG+NVPEVLEAIVTRLPPPKGDRDA LKALLVDSWYD YLGVVVLVRIVDG LRK QRIRM+ T+ASYEVDR GVFTPKLT  E+LGPGEIG +TA+IKEVADTRVGDTITDDRKP  EPLPGFRPAIPVVFCGLFPVDAA FEDLRAAMGKLRLNDASF+YEMETSAALGFGFRCGFLGLLHLEIIQERL REF+LDLIATAPSVIYKM L +G EIEIHNPVDMPDV++I EIHEPWIEAT++TPD+YLGAVLKLCQDRRG Q ELTY+G RA+VKY LPLNEVVFDFYDRLKSVSKGYASFDYHLT+YREADLVKM +LVN EPVDALSMLVH+TRAE RGR M  KLKE
Sbjct:  120 LANVYQALDNNHEVVPVLNKVDLPAAEPDKVKQQIEDVIGLDASDAILISAKTGENVPEVLEAIVTRLPPPKGDRDAPLKALLVDSWYDLYLGVVVLVRIVDGTLRKDQRIRMIQTDASYEVDRVGVFTPKLTAAEQLGPGEIGFLTASIKEVADTRVGDTITDDRKPCAEPLPGFRPAIPVVFCGLFPVDAANFEDLRAAMGKLRLNDASFTYEMETSAALGFGFRCGFLGLLHLEIIQERLAREFDLDLIATAPSVIYKMVLTDGKEIEIHNPVDMPDVVKIKEIHEPWIEATVMTPDEYLGAVLKLCQDRRGVQKELTYIGNRALVKYELPLNEVVFDFYDRLKSVSKGYASFDYHLTDYREADLVKMQMLVNAEPVDALSMLVHKTRAEARGRAMAEKLKE 524          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A6N7GSW6_9HYPH (Elongation factor 4 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSW6_9HYPH)

HSP 1 Score: 696 bits (1796), Expect = 3.490e-248
Identity = 350/405 (86.42%), Postives = 376/405 (92.84%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY ALD  HEIVPVLNKVDLPAAEPE+VK+QIEDVIGLDAS+++ ISAKTG NVP+VLEAIVTRLPPPKGDRDA LKALLVDSWYD YLGVVVLVRIVDGVLRK QRIRMM T+A+Y VDR GVFTPKLT  +ELGPGEIG +TA+IKEVADTRVGDTITDDRKPV EP+PGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFS+EMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYK+KLRNG  +EIHNPVD+PDVM+I EI EPWIEATILTPD+YLG+VLKLCQDRRG Q ELTYVG RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT Y+ ++LVK+ +LVN +PVDALSMLVHRTRAEQRGR M  KLKE
Sbjct:  118 LANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGLDASDSIGISAKTGLNVPDVLEAIVTRLPPPKGDRDAPLKALLVDSWYDLYLGVVVLVRIVDGVLRKDQRIRMMRTDAAYNVDRVGVFTPKLTQAQELGPGEIGFLTASIKEVADTRVGDTITDDRKPVAEPMPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKIKLRNGETMEIHNPVDLPDVMKIEEIEEPWIEATILTPDEYLGSVLKLCQDRRGSQKELTYVGNRAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTEYKASELVKLQMLVNGDPVDALSMLVHRTRAEQRGRAMAEKLKE 522          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A1Q7BGB5_9PROT (Elongation factor 4 n=6 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BGB5_9PROT)

HSP 1 Score: 694 bits (1792), Expect = 1.370e-247
Identity = 342/405 (84.44%), Postives = 375/405 (92.59%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY A+D  HE+VPVLNKVDLPAAEPE+V++QIEDVIGLDASNA++ISAKTG NVPEVLE IVTRLPPPKGDRDA LKALLVDSWYD+YLGVVVL+R+VDGVLR+GQRIRMMGT A+YE+DR GVFTPK+  VEELGPGEIG +TA+IK+VADTRVGDTITDDRKPV  PLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASF+YEMETSAALGFGFRCGFLGLLHLE+IQERL REFNLDLIATAPSVIYK+ L NG ++EIHNPVDMPD ++I E+ EPWI ATI+TPD+YLG+VLKLCQDRRG Q+ELTYVG RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT++R ADLVKM ILVN EPVDAL+MLVHRTRAE RGR M  KLKE
Sbjct:  117 LANVYQAIDNNHEVVPVLNKVDLPAAEPEKVRQQIEDVIGLDASNAILISAKTGLNVPEVLEGIVTRLPPPKGDRDAVLKALLVDSWYDSYLGVVVLLRVVDGVLRRGQRIRMMGTGAAYEIDRVGVFTPKMVDVEELGPGEIGFLTASIKQVADTRVGDTITDDRKPVTTPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFTYEMETSAALGFGFRCGFLGLLHLEVIQERLAREFNLDLIATAPSVIYKITLTNGDQLEIHNPVDMPDPVRIKEMEEPWIRATIMTPDEYLGSVLKLCQDRRGAQIELTYVGNRAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDFRTADLVKMQILVNGEPVDALAMLVHRTRAESRGRAMAEKLKE 521          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A363TVV9_9BRAD (Elongation factor 4 n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A363TVV9_9BRAD)

HSP 1 Score: 687 bits (1774), Expect = 7.720e-245
Identity = 344/405 (84.94%), Postives = 372/405 (91.85%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY A+D  HEIVPVLNK+DLPAAEPE+VK+QIEDVIGLDAS+AV ISAKTG N+P VLEAIVTRLPPPKGDR  TLKALLVDSWYDAYLGV+VLVRIVDGVL+KG RIR+MGT ASYEVDR GVFTPK   V+ LGPGEIG +TA+IKEVADTRVGDTITDDRKPV E LPGFRPAIPVVFCGLFPVDAA FE+LRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSV+Y++ L +G EIEIHNPVDMPDV++I EIHEPWIEAT+LTPD+YLG+VLKLCQDRRG Q ELTYVG RA+VKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT+YR ADLVK+ ILVN EPVDAL+MLVH+TRAE RGR M  KLKE
Sbjct:  118 LANVYQAIDNNHEIVPVLNKIDLPAAEPEKVKQQIEDVIGLDASDAVEISAKTGLNIPAVLEAIVTRLPPPKGDRTGTLKALLVDSWYDAYLGVIVLVRIVDGVLKKGDRIRLMGTGASYEVDRVGVFTPKRVEVDRLGPGEIGFLTASIKEVADTRVGDTITDDRKPVTEALPGFRPAIPVVFCGLFPVDAADFEELRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVVYRITLTDGKEIEIHNPVDMPDVVRIEEIHEPWIEATVLTPDEYLGSVLKLCQDRRGVQKELTYVGNRALVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDYRPADLVKLQILVNAEPVDALAMLVHKTRAESRGRAMCEKLKE 522          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: LEPA_BRADU (Elongation factor 4 n=390 Tax=Proteobacteria TaxID=1224 RepID=LEPA_BRADU)

HSP 1 Score: 687 bits (1774), Expect = 8.290e-245
Identity = 345/405 (85.19%), Postives = 374/405 (92.35%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY ALD  HEIVPVLNKVDLPAAEPE+VK+QIEDVIG+DAS+AVMISAKTG  VP+VLEAIVTRLPPPKGDRDATLKALLVDSWYD YLGVVVL+R+VDGV++KG R+RMMGT A+Y+V+R G FTPK+T V+ELGPGEIG ITAAIKEVADTRVGDTITDDRKPV E LPGF+PAIPVVFCGLFPVDA  FE LRAAMGKLRLNDASFS+EMETSAALGFGFRCGFLGLLHLEIIQERL REF+L+LIATAPSVIYKMKL +G E+EIHNPVDMPDV++I EI EPWIEATILTPD+YLG+VLKLCQDRRG Q ELTYVG RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT+Y+ ADLVKM ILVN EPVDALSMLVHRTRAE RGR MV K+KE
Sbjct:  120 LANVYQALDNNHEIVPVLNKVDLPAAEPEKVKQQIEDVIGIDASDAVMISAKTGLGVPDVLEAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGSRVRMMGTGAAYDVERVGFFTPKMTQVDELGPGEIGFITAAIKEVADTRVGDTITDDRKPVTEMLPGFKPAIPVVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLSREFDLNLIATAPSVIYKMKLTDGTELEIHNPVDMPDVVKIEEIQEPWIEATILTPDEYLGSVLKLCQDRRGAQKELTYVGARAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDYKPADLVKMQILVNAEPVDALSMLVHRTRAEGRGRAMVEKMKE 524          
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Match: A0A521VX46_9HYPH (Elongation factor 4 n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VX46_9HYPH)

HSP 1 Score: 680 bits (1755), Expect = 5.970e-242
Identity = 344/405 (84.94%), Postives = 368/405 (90.86%), Query Frame = 1
Query:    1 LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMISAKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRIVDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAIKEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRAAMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPDDYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVSKGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMVAKLKE 1215
            LANVY ALD  HE++PVLNK DLPAAEP++VK+QIEDVIGLDAS A++ISAKTG  + +VLEAIVTRLPPPKGD  ATLKALLVDSWYD YLGVVVLVRIVDG L+KGQRIRMMGTNASYEV+R GVFTPK+  + ELGPGEIG ITA+IKEVADTRVGDTITDDR PV  PL GFRPAIPVVFCGLFPVDAA FE LRAAMGKLRLNDASF++EMETSAALGFGFRCGFLGLLHLEIIQERLEREFNL+LIATAPSVIYKM L +G EIEIHNPVDMPDV++I EI EPWIEATILTPDDYLG+VLKLCQDRRG Q ELTYVG RAMVKY+LPLNEVVFDFYDRLKSVSKGYASFDYHLT+YR ADLVKM ILVN EPVDALSMLVHR+RAE RGR MV KLKE
Sbjct:  118 LANVYQALDNNHEVLPVLNKADLPAAEPDKVKQQIEDVIGLDASEALLISAKTGMGIGDVLEAIVTRLPPPKGDPAATLKALLVDSWYDVYLGVVVLVRIVDGTLKKGQRIRMMGTNASYEVERVGVFTPKMLNMSELGPGEIGFITASIKEVADTRVGDTITDDRNPVATPLAGFRPAIPVVFCGLFPVDAADFETLRAAMGKLRLNDASFTFEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLNLIATAPSVIYKMHLTDGSEIEIHNPVDMPDVVKIAEIEEPWIEATILTPDDYLGSVLKLCQDRRGSQKELTYVGNRAMVKYDLPLNEVVFDFYDRLKSVSKGYASFDYHLTDYRPADLVKMQILVNAEPVDALSMLVHRSRAEGRGRAMVEKLKE 522          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20555.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127F3Z8_9HYPH3.390e-26089.63Elongation factor 4 n=2 Tax=Hyphomicrobiales TaxID... [more]
A0A0Q7TL55_9HYPH1.030e-25287.16Elongation factor 4 n=3 Tax=Pseudolabrys TaxID=556... [more]
A0A537L6S7_9PROT1.460e-25287.90Elongation factor 4 n=1 Tax=Alphaproteobacteria ba... [more]
A0A1Q4DCB7_9HYPH3.240e-24986.42Elongation factor 4 n=1 Tax=Rhizobiales bacterium ... [more]
A0A6L5FEN9_9HYPH1.860e-24886.17Elongation factor 4 n=1 Tax=Hyphomicrobiales bacte... [more]
A0A6N7GSW6_9HYPH3.490e-24886.42Elongation factor 4 n=1 Tax=Hyphomicrobiales bacte... [more]
A0A1Q7BGB5_9PROT1.370e-24784.44Elongation factor 4 n=6 Tax=unclassified Alphaprot... [more]
A0A363TVV9_9BRAD7.720e-24584.94Elongation factor 4 n=2 Tax=Hyphomicrobiales TaxID... [more]
LEPA_BRADU8.290e-24585.19Elongation factor 4 n=390 Tax=Proteobacteria TaxID... [more]
A0A521VX46_9HYPH5.970e-24284.94Elongation factor 4 n=1 Tax=Xanthobacteraceae bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20555contigP-wetherbeei_contig20555:2..1216 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog316055.RPE_0827
Preferred namelepA
PFAMsEFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
Model size1215
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03596
KEGG Pathwayko05134,map05134
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.63e-250
EggNOG OGsCOG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,2TR3H@28211|Alphaproteobacteria,3JR8J@41294|Bradyrhizobiaceae
DescriptionRequired for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
Cds size1215
COG categoryM
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186202.6690884-CDS-P-wetherbeei_contig20555:1..12161683186202.6690884-CDS-P-wetherbeei_contig20555:1..1216Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20555 2..1216 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20555.1.1prot_P-wetherbeei_contig20555.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20555 2..1216 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20555.1.1

>prot_P-wetherbeei_contig20555.1.1 ID=prot_P-wetherbeei_contig20555.1.1|Name=mRNA_P-wetherbeei_contig20555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=405bp
LANVYHALDAGHEIVPVLNKVDLPAAEPEQVKKQIEDVIGLDASNAVMIS
AKTGQNVPEVLEAIVTRLPPPKGDRDATLKALLVDSWYDAYLGVVVLVRI
VDGVLRKGQRIRMMGTNASYEVDRTGVFTPKLTPVEELGPGEIGAITAAI
KEVADTRVGDTITDDRKPVLEPLPGFRPAIPVVFCGLFPVDAAQFEDLRA
AMGKLRLNDASFSYEMETSAALGFGFRCGFLGLLHLEIIQERLEREFNLD
LIATAPSVIYKMKLRNGGEIEIHNPVDMPDVMQILEIHEPWIEATILTPD
DYLGAVLKLCQDRRGEQVELTYVGTRAMVKYNLPLNEVVFDFYDRLKSVS
KGYASFDYHLTNYREADLVKMSILVNDEPVDALSMLVHRTRAEQRGRGMV
AKLKE
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mRNA from alignment at P-wetherbeei_contig20555:2..1216-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20555.1.1 ID=mRNA_P-wetherbeei_contig20555.1.1|Name=mRNA_P-wetherbeei_contig20555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1215bp|location=Sequence derived from alignment at P-wetherbeei_contig20555:2..1216- (Phaeothamnion wetherbeei SAG_119_79)
CTGGCCAACGTCTATCACGCGCTCGATGCCGGCCACGAAATCGTGCCGGT GCTCAACAAGGTCGATCTTCCGGCCGCCGAGCCCGAACAGGTCAAGAAGC AGATCGAGGACGTGATCGGTCTCGATGCATCGAACGCGGTGATGATCTCG GCCAAGACCGGGCAGAACGTCCCCGAGGTGCTGGAGGCGATCGTCACGCG CTTGCCGCCGCCCAAAGGTGATCGGGATGCGACGCTCAAGGCGCTGCTGG TCGATAGCTGGTACGACGCCTATCTCGGCGTCGTCGTCCTGGTCCGCATC GTCGACGGCGTTTTGAGGAAGGGCCAGCGCATCCGCATGATGGGGACGAA TGCGTCCTACGAGGTCGACCGCACCGGCGTGTTCACTCCGAAGCTGACGC CTGTCGAGGAGCTCGGCCCCGGCGAGATCGGCGCCATCACCGCAGCCATT AAGGAGGTCGCCGACACCCGCGTCGGCGACACCATCACGGACGACAGGAA GCCGGTGCTGGAGCCGCTGCCCGGTTTCCGCCCCGCGATCCCGGTGGTGT TCTGCGGATTGTTCCCGGTCGATGCCGCGCAGTTCGAAGACCTGCGCGCT GCCATGGGCAAGCTGCGGCTCAACGACGCCAGCTTCAGCTACGAGATGGA AACCAGCGCGGCACTCGGCTTCGGCTTCCGCTGCGGCTTCCTCGGCCTCT TGCATCTGGAGATCATCCAGGAGCGGCTGGAGCGCGAATTCAATCTCGAC CTCATCGCAACCGCGCCGTCGGTCATCTACAAGATGAAGCTGCGCAACGG CGGCGAGATCGAGATCCATAATCCGGTCGACATGCCGGACGTGATGCAGA TTCTTGAAATCCACGAGCCGTGGATCGAAGCGACGATTCTGACGCCGGAC GATTATCTCGGCGCGGTGCTCAAGCTGTGCCAGGACCGCCGCGGCGAGCA GGTCGAACTGACCTATGTCGGCACCCGCGCGATGGTGAAGTACAATCTGC CGCTCAACGAGGTAGTGTTCGACTTCTACGACCGGCTGAAATCGGTGTCG AAGGGCTATGCCTCATTCGACTATCACCTCACCAACTACCGGGAAGCCGA CCTGGTGAAGATGTCGATCCTGGTCAACGACGAGCCGGTCGACGCACTCT CGATGCTGGTCCACCGCACCCGCGCCGAGCAGCGTGGCCGCGGCATGGTC GCGAAGCTGAAGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20555:2..1216-

>mRNA_P-wetherbeei_contig20555.1.1 ID=mRNA_P-wetherbeei_contig20555.1.1|Name=mRNA_P-wetherbeei_contig20555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1215bp|location=Sequence derived from alignment at P-wetherbeei_contig20555:2..1216- (Phaeothamnion wetherbeei SAG_119_79)
CTGGCCAACGTCTATCACGCGCTCGATGCCGGCCACGAAATCGTGCCGGT
GCTCAACAAGGTCGATCTTCCGGCCGCCGAGCCCGAACAGGTCAAGAAGC
AGATCGAGGACGTGATCGGTCTCGATGCATCGAACGCGGTGATGATCTCG
GCCAAGACCGGGCAGAACGTCCCCGAGGTGCTGGAGGCGATCGTCACGCG
CTTGCCGCCGCCCAAAGGTGATCGGGATGCGACGCTCAAGGCGCTGCTGG
TCGATAGCTGGTACGACGCCTATCTCGGCGTCGTCGTCCTGGTCCGCATC
GTCGACGGCGTTTTGAGGAAGGGCCAGCGCATCCGCATGATGGGGACGAA
TGCGTCCTACGAGGTCGACCGCACCGGCGTGTTCACTCCGAAGCTGACGC
CTGTCGAGGAGCTCGGCCCCGGCGAGATCGGCGCCATCACCGCAGCCATT
AAGGAGGTCGCCGACACCCGCGTCGGCGACACCATCACGGACGACAGGAA
GCCGGTGCTGGAGCCGCTGCCCGGTTTCCGCCCCGCGATCCCGGTGGTGT
TCTGCGGATTGTTCCCGGTCGATGCCGCGCAGTTCGAAGACCTGCGCGCT
GCCATGGGCAAGCTGCGGCTCAACGACGCCAGCTTCAGCTACGAGATGGA
AACCAGCGCGGCACTCGGCTTCGGCTTCCGCTGCGGCTTCCTCGGCCTCT
TGCATCTGGAGATCATCCAGGAGCGGCTGGAGCGCGAATTCAATCTCGAC
CTCATCGCAACCGCGCCGTCGGTCATCTACAAGATGAAGCTGCGCAACGG
CGGCGAGATCGAGATCCATAATCCGGTCGACATGCCGGACGTGATGCAGA
TTCTTGAAATCCACGAGCCGTGGATCGAAGCGACGATTCTGACGCCGGAC
GATTATCTCGGCGCGGTGCTCAAGCTGTGCCAGGACCGCCGCGGCGAGCA
GGTCGAACTGACCTATGTCGGCACCCGCGCGATGGTGAAGTACAATCTGC
CGCTCAACGAGGTAGTGTTCGACTTCTACGACCGGCTGAAATCGGTGTCG
AAGGGCTATGCCTCATTCGACTATCACCTCACCAACTACCGGGAAGCCGA
CCTGGTGAAGATGTCGATCCTGGTCAACGACGAGCCGGTCGACGCACTCT
CGATGCTGGTCCACCGCACCCGCGCCGAGCAGCGTGGCCGCGGCATGGTC
GCGAAGCTGAAGGAG
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