mRNA_P-wetherbeei_contig20534.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20534.1.1
Unique NamemRNA_P-wetherbeei_contig20534.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.140e-28
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1
Query:    7 ALPSPLWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVVHALDDLSRLTHNIIALVAF 510
            +LPSP+   LP + G +GGHTL++        LE WA+E+G    + L + GN   VV+ + ++RRIL LRPS  +              VGV   LFFEEGK+WGR RRL +P+ +  N   MLP +A++ +R   K G  AD+  VV + D  +R TH+I+AL AF
Sbjct:   53 SLPSPM-PALPRWCGFIGGHTLVMQPGETVWQLEGWAKEFG--GDYELYLAGNKVTVVSGLSDIRRILTLRPSKFKRGIVTNQTKWASEQVGVQSSLFFEEGKTWGRSRRLISPNLNGHNVAAMLPIIAKVGERFCGKLGDKADAREVVTSRDSFARFTHDIVALAAF 217          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 7.260e-25
Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 1
Query:    1 SNALPSPLWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFS-ERNTERMLPDVARIADRLVVKWGSAADSGAVVHALDDLSRLTHNIIALVAF 510
            S++LPSP+   LP ++  +GGHTL ++  ++   +E WA +  +G  + + + G   + VTD  ++RRIL LRPS  +   RP         VGVYP LFFEEGK WGR RRL AP  S  +N   M+P +A+IA+R+  K G     G  V  + +  R TH+ IAL  F
Sbjct:   55 SSSLPSPV-AVLPRWIPFVGGHTLQMESEKMMQQVEGWADD--LGGDYEITLIGKRVIFVTDPEDIRRILLLRPSKFKRGWRP---------VGVYPSLFFEEGKEWGRSRRLIAPFLSGHKNVAGMVPSIAKIAERVCAKLGDG--QGEPVDFVQEFGRYTHDAIALSGF 211          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: C5LIW4_PERM5 (Cytochrome p450, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LIW4_PERM5)

HSP 1 Score: 64.7 bits (156), Expect = 1.930e-9
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   22 LWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV 453
            L+GG   FL  +G     +D   +   LE +A  YG    + + + G   +VV+D   +R++LN RP   R + +P +      + G    +F  EG+ W R RRL AP+F++ N+  M+PD++++A RL+ +  S +  G +V
Sbjct:   53 LFGGPNHFLPVLGFIPKSVD--HLCHALEIYADTYG--DVYNMRIIGGDVIVVSDPELIRQVLNARP---RTYIKPFNKHRIMPMEG----MFNTEGEVWKRNRRLGAPAFNDINSSAMIPDMSKVALRLIRQLKSLSQDGVIV 185          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: C5LIW0_PERM5 (Cytochrome p450, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LIW0_PERM5)

HSP 1 Score: 63.5 bits (153), Expect = 3.740e-9
Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = 1
Query:  103 LEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV 453
            LE +A  YG    + + + G   +VV+D   +R +LN RP   R + RP++  +   + G    +F  EG+ W R RRL AP+F++ N+  M+PD++++A RL+ +  S +  G +V
Sbjct:   78 LEIYADTYG--DVYHIKILGGDVLVVSDPELIRDVLNARP---RTYFRPSNRDKILPIEG----MFTTEGEVWKRNRRLGAPAFNDINSSAMIPDMSKVALRLIRQLKSLSQDGVIV 185          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: C5L2F1_PERM5 (Cytochrome P450, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L2F1_PERM5)

HSP 1 Score: 64.7 bits (156), Expect = 4.520e-9
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   22 LWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV 453
            L+GG   FL  +G     +D   +   LE +A  YG    + + + G   +VV+D   +R++LN RP   R + +P +      + G    +F  EG+ W R RRL AP+F++ N+  M+PD++++A RL+ +  S +  G +V
Sbjct:   53 LFGGPNHFLPVLGFIPKSVD--HLCHALEIYADTYG--DVYNMRIIGGDVIVVSDPELIRQVLNARP---RTYIKPFNKHRIMPMEG----MFNTEGEVWKRNRRLGAPAFNDINSSAMIPDMSKVALRLIRQLKSLSQDGVIV 185          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: A0A7J6PLG7_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PLG7_PEROL)

HSP 1 Score: 62.0 bits (149), Expect = 1.340e-8
Identity = 45/140 (32.14%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  103 LEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGK-RIFARPADLAETGAVVGVYPF--LFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVVHALDDLSRL-THNIIALVAF 510
            LE +A  YG    + + +T    +VV+D   +R++L  RP+   R F +          + V PF  +F  EG+ W R RRL AP+F++ N+  M+PD+AR+A +LV +  S +  G +V +  +   L T +I+ + +F
Sbjct:   77 LEMFADTYG--GVYCIKITTKEVIVVSDPELIRQVLTERPNTYIRRFNK----------INVLPFSGMFTTEGEKWKRNRRLGAPAFNDVNSAAMVPDIARVAKKLVRQLNSLSQDGRIVWSPTEWIPLCTLDILCVTSF 204          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: C5LIW7_PERM5 (Cytochrome p450, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LIW7_PERM5)

HSP 1 Score: 63.2 bits (152), Expect = 1.720e-8
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   22 LWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV-HALDDLSRLTHNIIALVA 507
            L+GG   F+  +G     LD   +   LE +A  YG    + + V G   + +++   VR++LN RP   + F +P +      V G    +F  EG+ W R RRL AP+F++ N+  M+PD++++A RL+ +  S    G +V      LS  T +I+ + A
Sbjct:   53 LFGGPNHFMPFLGFIPKSLD--HLFHALEIYADTYG--DVYHIKVIGMDMLAISNPDLVRQVLNARP---KTFVKPFNKQRIIPVEG----MFTTEGEVWKRNRRLGAPAFNDNNSSAMIPDMSKVASRLIRQLKSLGQDGVIVWRPTKWLSLCTLDILCVTA 204          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: A0A7J6N8N1_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6N8N1_PEROL)

HSP 1 Score: 61.2 bits (147), Expect = 7.170e-8
Identity = 46/144 (31.94%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   22 LWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV 453
            L+GG   FL  +G     LD   +   LE +A  YG    + +   G   V V+    VR++LN RP   + F +P +  +   + G    +F  EG+ W R RRL AP+F++ N++ M+PD++++A +LV +  S + +G +V
Sbjct:   53 LFGGPNRFLPFVGFIPKSLD--HLFHALEIYADTYG--DIYHIKTLGMDVVAVSKPELVRQVLNARP---KTFIKPFNKHKIMPIPG----MFNTEGEEWKRNRRLGAPAFNDNNSDAMVPDMSKVALKLVRQLKSLSQNGRIV 185          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: C5L2F2_PERM5 (Cytochrome P450, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L2F2_PERM5)

HSP 1 Score: 60.1 bits (144), Expect = 1.790e-7
Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  133 GKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVV 453
            G  + +   G   +VV+D   +R++LN RP   + + +P +  +   V G    +F  EG+ W R RRL AP+F++ N+  M+PD++++A RL+ +  S +  G +V
Sbjct:   86 GGVYHMRFVGGDMIVVSDPELIRQVLNARP---KTYIKPFNKHKIVPVDG----MFTTEGEVWRRNRRLGAPAFNDINSSAMIPDMSKVALRLIQQLKSLSQDGVIV 185          
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Match: A0A315ZAU7_9BACT (Cytochrome P450 n=1 Tax=Sediminitomix flava TaxID=379075 RepID=A0A315ZAU7_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.850e-7
Identity = 38/136 (27.94%), Postives = 69/136 (50.74%), Query Frame = 1
Query:  103 LEHWAREYGVGKPFTLNVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLFFEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAVVHALDDLSRLTHNIIALVAF 510
            LE WA E  +G  + + +     +V  D    ++IL  RP   R F +  ++     V GV    F  EG+ W   R+L A + + +N +  +P++ ++ +RL+ +WG  +++   V    +L R T +I +L+AF
Sbjct:  144 LERWANE--LGDIYKIRLATQEFIVSADESLNQQILKKRPKVFRRFHKIDEVMSEMGVNGV----FNTEGEEWYTHRKLIAEALNLKNVKSYIPNMVKVTERLLERWGEESNNSLEVDLQQELMRYTVDITSLIAF 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20534.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LC30_ECTSI1.140e-2841.07Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
D7FPK1_ECTSI7.260e-2540.35Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
C5LIW4_PERM51.930e-931.25Cytochrome p450, putative n=1 Tax=Perkinsus marinu... [more]
C5LIW0_PERM53.740e-933.33Cytochrome p450, putative n=2 Tax=Perkinsus marinu... [more]
C5L2F1_PERM54.520e-931.25Cytochrome P450, putative n=1 Tax=Perkinsus marinu... [more]
A0A7J6PLG7_PEROL1.340e-832.14Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
C5LIW7_PERM51.720e-830.67Cytochrome p450, putative n=1 Tax=Perkinsus marinu... [more]
A0A7J6N8N1_PEROL7.170e-831.94Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
C5L2F2_PERM51.790e-731.78Cytochrome P450, putative n=1 Tax=Perkinsus marinu... [more]
A0A315ZAU7_9BACT1.850e-727.94Cytochrome P450 n=1 Tax=Sediminitomix flava TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20534contigP-wetherbeei_contig20534:217..986 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LC30
PFAMsp450
Model size510
Max annot lvl2759|Eukaryota
KEGG koko:K15388,ko:K21446
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.87e-29
EggNOG OGsCOG2124@1|root,KOG0158@2759|Eukaryota
Descriptioniron ion binding
Cds size510
COG categoryC
BRITEko00000,ko01008
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186202.1300416-CDS-P-wetherbeei_contig20534:216..4511683186202.1300416-CDS-P-wetherbeei_contig20534:216..451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20534 217..451 +
1683186202.1389964-CDS-P-wetherbeei_contig20534:711..9861683186202.1389964-CDS-P-wetherbeei_contig20534:711..986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20534 712..986 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20534.1.1prot_P-wetherbeei_contig20534.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20534 217..986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20534.1.1

>prot_P-wetherbeei_contig20534.1.1 ID=prot_P-wetherbeei_contig20534.1.1|Name=mRNA_P-wetherbeei_contig20534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
SNALPSPLWGGLPSFLGSMGGHTLLLDWSRITAFLEHWAREYGVGKPFTL
NVTGNPTVVVTDVVEVRRILNLRPSGKRIFARPADLAETGAVVGVYPFLF
FEEGKSWGRVRRLTAPSFSERNTERMLPDVARIADRLVVKWGSAADSGAV
VHALDDLSRLTHNIIALVAF
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mRNA from alignment at P-wetherbeei_contig20534:217..986+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20534.1.1 ID=mRNA_P-wetherbeei_contig20534.1.1|Name=mRNA_P-wetherbeei_contig20534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=770bp|location=Sequence derived from alignment at P-wetherbeei_contig20534:217..986+ (Phaeothamnion wetherbeei SAG_119_79)
AGCAACGCGCTTCCTTCGCCTCTTTGGGGCGGGTTGCCATCGTTTTTGGG TTCCATGGGAGGCCACACGCTGTTATTAGATTGGAGCAGAATAACAGCTT TCCTCGAGCACTGGGCTCGCGAGTACGGGGTCGGGAAGCCCTTCACGCTA AACGTCACCGGCAACCCCACGGTGGTCGTCACGGACGTCGTCGAAGTGCG GCGCATCCTGAACCTTCGGCCGAGCGGTAAGCGTAGTTAGACCCGTTAGC ATCGGCTTTTCCTGATGTTTTGACCGGCTGTTCGATGTTCCAGTAGTGCG ATTCCATTATGGCGTAGGCGAGCACCATGATCGCTGCTGTTCGCCCAGTT TATGCCGTCGTCGCTGCCGCCGCCGCCGCCGCCGGCACCAAGGCCACCGC CAACGCCGCCGCCGCTGCTGCGTTATCATCACCGTCTCCTCGCCCGCTGC CTCCTCTCACCTGCCCTCCCTGCTTCAAATCCCCCGCCGCTCCAGTCTTT GCGCGCCCCGCCGACCTCGCTGAAACTGGGGCCGTTGTTGGCGTCTACCC CTTCCTCTTCTTTGAGGAAGGAAAAAGCTGGGGCCGCGTCCGGCGGCTCA CGGCGCCGTCGTTCAGCGAGCGAAACACGGAGCGGATGCTGCCGGACGTC GCCCGCATCGCCGACCGCCTTGTGGTCAAGTGGGGCAGCGCCGCCGACTC TGGCGCTGTCGTTCACGCGCTGGATGATCTTTCGCGGCTCACCCACAACA TCATCGCGCTCGTGGCTTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20534:217..986+

>mRNA_P-wetherbeei_contig20534.1.1 ID=mRNA_P-wetherbeei_contig20534.1.1|Name=mRNA_P-wetherbeei_contig20534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig20534:217..986+ (Phaeothamnion wetherbeei SAG_119_79)
AGCAACGCGCTTCCTTCGCCTCTTTGGGGCGGGTTGCCATCGTTTTTGGG
TTCCATGGGAGGCCACACGCTGTTATTAGATTGGAGCAGAATAACAGCTT
TCCTCGAGCACTGGGCTCGCGAGTACGGGGTCGGGAAGCCCTTCACGCTA
AACGTCACCGGCAACCCCACGGTGGTCGTCACGGACGTCGTCGAAGTGCG
GCGCATCCTGAACCTTCGGCCGAGCGGTAAGCGTATCTTTGCGCGCCCCG
CCGACCTCGCTGAAACTGGGGCCGTTGTTGGCGTCTACCCCTTCCTCTTC
TTTGAGGAAGGAAAAAGCTGGGGCCGCGTCCGGCGGCTCACGGCGCCGTC
GTTCAGCGAGCGAAACACGGAGCGGATGCTGCCGGACGTCGCCCGCATCG
CCGACCGCCTTGTGGTCAAGTGGGGCAGCGCCGCCGACTCTGGCGCTGTC
GTTCACGCGCTGGATGATCTTTCGCGGCTCACCCACAACATCATCGCGCT
CGTGGCTTTC
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