mRNA_P-wetherbeei_contig20521.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20521.1.1
Unique NamemRNA_P-wetherbeei_contig20521.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A8K1FTM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FTM3_PYTOL)

HSP 1 Score: 53.5 bits (127), Expect = 6.400e-7
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 1 
Query:    1 ELRLWDLGGQEAYHAAHALFFSDRALYII---VFDLSRATGSKEDIDKRVQFWV 153
            E+  WD  GQ+ YH AH LFFS+RALY I   V D  +A   +E +  +V  W+
Sbjct:  768 EVSFWDFAGQDVYHNAHTLFFSERALYFICVNVEDFDKAVSKREFVQDQVWRWI 821
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A1Q3H0T7_9BACT (COR domain-containing protein n=1 Tax=marine bacterium AO1-C TaxID=1905359 RepID=A0A1Q3H0T7_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-6
Identity = 20/32 (62.50%), Postives = 28/32 (87.50%), Query Frame = 1 
Query:    1 ELRLWDLGGQEAYHAAHALFFSDRALYIIVFD 96
            ++ +WD GGQE YHA H+LFFS++ALY+I+FD
Sbjct:  584 KVAIWDFGGQEFYHATHSLFFSNKALYLILFD 615
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A2P4X473_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X473_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.070e-6
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 ELRLWDLGGQEAYHAAHALFFSDRALYIIVFDLSRATGSKEDIDKRV 141
            ++  WD  GQE YHAAHA+FFS R LY++  DL       ++ D +V
Sbjct:  666 DVTFWDFAGQEVYHAAHAIFFSKRTLYLVCIDLQAYDKMLKEADAKV 712
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A2A4T7J0_9DELT (Uncharacterized protein n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4T7J0_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 5.740e-6
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 1 
Query:    1 ELRLWDLGGQEAYHAAHALFFSDRALYIIV 90
            +L++WD GGQ+ YHA H  FFSDRALY++V
Sbjct:  619 QLKVWDFGGQDIYHATHQYFFSDRALYLVV 648
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A7S2EHI5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHI5_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 6.600e-6
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 1 
Query:   10 LWDLGGQEAYHAAHALFFSDRALYIIVFDL---SRATGSKED 126
            +WD  GQ+ YHA H LFFS RALYI+V+D+   + AT  K D
Sbjct:  115 VWDFAGQQEYHATHELFFSPRALYILVWDMGVKNEATFPKPD 156
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A3M6U706_POCDA (COR domain-containing protein (Fragment) n=3 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U706_POCDA)

HSP 1 Score: 50.4 bits (119), Expect = 7.840e-6
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 1 
Query:   10 LWDLGGQEAYHAAHALFFSDRALYIIVFDLSRATGSK 120
            LWD GGQ  Y+A H LF + RA+Y++V+DLSR    K
Sbjct:  181 LWDFGGQSVYYATHPLFLTTRAIYLLVYDLSRDPNGK 217
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A7S1ZZC8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZC8_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 7.850e-6
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 1 
Query:   10 LWDLGGQEAYHAAHALFFSDRALYIIVFDLSRATGSKEDIDKRV 141
            +WD  GQ  YHA H LFFS RALY++V+D+     +  D  KR+
Sbjct:  889 VWDFAGQHVYHATHELFFSQRALYVLVWDMG---ATNNDTQKRI 929
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A0W8D1D1_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D1D1_PHYNI)

HSP 1 Score: 50.1 bits (118), Expect = 1.070e-5
Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 1 
Query:    1 ELRLWDLGGQEAYHAAHALFFSDRALYIIVFDLSRATGSKEDI 129
            ++  WD  GQ+ YH  HALFFS+R +Y+I  DLS      ED+
Sbjct:  111 DVTFWDFAGQDIYHVTHALFFSERTMYLICVDLSVYAKKLEDV 153
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: UPI0009E43B6A (uncharacterized protein LOC110053606 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E43B6A)

HSP 1 Score: 50.1 bits (118), Expect = 1.080e-5
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 1 
Query:   10 LWDLGGQEAYHAAHALFFSDRALYIIVFDLSR 105
            LWD GGQ  Y+A H LF + RA+Y++VFDLSR
Sbjct:  790 LWDFGGQSVYYATHPLFLTARAIYLLVFDLSR 821
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BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Match: A0A7S4R596_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R596_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.460e-5
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 1 
Query:   10 LWDLGGQEAYHAAHALFFSDRALYIIVFDL---SRATGSKED 126
            +WD  GQ+ YHA H LFFS RALYI+V+D+   + AT  K D
Sbjct:  572 VWDFAGQQEYHATHELFFSPRALYILVWDMGVKNEATFPKPD 613
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20521.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1FTM3_PYTOL6.400e-744.44Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Q3H0T7_9BACT1.200e-662.50COR domain-containing protein n=1 Tax=marine bacte... [more]
A0A2P4X473_9STRA3.070e-644.68Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2A4T7J0_9DELT5.740e-663.33Uncharacterized protein n=1 Tax=SAR324 cluster bac... [more]
A0A7S2EHI5_9STRA6.600e-654.76Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A3M6U706_POCDA7.840e-654.05COR domain-containing protein (Fragment) n=3 Tax=P... [more]
A0A7S1ZZC8_9STRA7.850e-647.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A0W8D1D1_PHYNI1.070e-546.51Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
UPI0009E43B6A1.080e-562.50uncharacterized protein LOC110053606 n=1 Tax=Orbic... [more]
A0A7S4R596_9STRA1.460e-554.76Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20521contigP-wetherbeei_contig20521:1065..1217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FWK1
Preferred namePKD1
PFAMsLRR_4,LRR_8,Lectin_C,PKD,REJ,WSC
Model size153
Max annot lvl2759|Eukaryota
KEGG koko:K04985,ko:K10348,ko:K10641
KEGG TC1.A.5.1.1
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000075,GO:0000076,GO:0000151,GO:0000278,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007049,GO:0007093,GO:0007346,GO:0008150,GO:0009987,GO:0010389,GO:0010564,GO:0010948,GO:0010972,GO:0022402,GO:0031461,GO:0031462,GO:0031570,GO:0032991,GO:0033314,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0044774,GO:0044818,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051726,GO:0065007,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902749,GO:1902750,GO:1903047,GO:1990234
Exons1
Evalue7.22e-13
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
EC2.3.2.27
Descriptionregulation of response to stimulus
Cds size153
COG categoryU
BRITEko00000,ko01000,ko04040,ko04091,ko04121,ko04131,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186201.8388667-CDS-P-wetherbeei_contig20521:1064..12171683186201.8388667-CDS-P-wetherbeei_contig20521:1064..1217Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20521 1065..1217 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20521.1.1prot_P-wetherbeei_contig20521.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20521 1065..1217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20521.1.1

>prot_P-wetherbeei_contig20521.1.1 ID=prot_P-wetherbeei_contig20521.1.1|Name=mRNA_P-wetherbeei_contig20521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=51bp
ELRLWDLGGQEAYHAAHALFFSDRALYIIVFDLSRATGSKEDIDKRVQFW
V
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mRNA from alignment at P-wetherbeei_contig20521:1065..1217-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20521.1.1 ID=mRNA_P-wetherbeei_contig20521.1.1|Name=mRNA_P-wetherbeei_contig20521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=153bp|location=Sequence derived from alignment at P-wetherbeei_contig20521:1065..1217- (Phaeothamnion wetherbeei SAG_119_79)
GAGCTACGTCTGTGGGACCTCGGAGGGCAAGAGGCGTACCACGCGGCGCA
CGCTCTCTTTTTCTCGGACCGCGCCCTGTACATAATCGTGTTTGACCTCA
GCCGTGCCACCGGCAGCAAGGAGGACATTGACAAGCGTGTGCAGTTCTGG
GTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20521:1065..1217-

>mRNA_P-wetherbeei_contig20521.1.1 ID=mRNA_P-wetherbeei_contig20521.1.1|Name=mRNA_P-wetherbeei_contig20521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=153bp|location=Sequence derived from alignment at P-wetherbeei_contig20521:1065..1217- (Phaeothamnion wetherbeei SAG_119_79)
GAGCTACGTCTGTGGGACCTCGGAGGGCAAGAGGCGTACCACGCGGCGCA
CGCTCTCTTTTTCTCGGACCGCGCCCTGTACATAATCGTGTTTGACCTCA
GCCGTGCCACCGGCAGCAAGGAGGACATTGACAAGCGTGTGCAGTTCTGG
GTG
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