mRNA_P-wetherbeei_contig20506.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A835YTK2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.290e-15 Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 1 EPRKKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDFQNNLVK 189
E ++ V+LVY +GG+TFLEVAALRFL R +D F +V+ATTKIL+G +F+ LMP F N L +
Sbjct: 605 EKKRPVLLVYYVGGVTFLEVAALRFLGRQRDFPFEVVVATTKILSGDAFVRTLMPSFDNGLAQ 667
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A6H5L2P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P5_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-14 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 EPRKKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDFQNNLVK 189
P++KVMLVY IGG+T++E+AALRFL+ ++ F IV ATTK+ NG F+ L+P+F N L +
Sbjct: 633 SPKRKVMLVYFIGGVTYMEIAALRFLNAQREFPFEIVTATTKVTNGEEFLETLLPNFDNRLQR 695
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A1Z9QCA2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QCA2_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 1.010e-13 Identity = 32/61 (52.46%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 7 RKKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDFQNNLVK 189
+KKVM+VY IGG+T++E+AALRFL+ D F IV+ATTK++NG++F+ ++P+ N L K
Sbjct: 578 KKKVMMVYFIGGVTWMEIAALRFLNSRSDFPFTIVVATTKLVNGNTFLRAILPEVDNRLGK 638
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A2R5GFC7_9STRA (Vacuolar protein sorting-associated protein 33A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFC7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.540e-13 Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 EPRKKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDFQNNLVK 189
+P KKVMLV+ GG+TF E+AALRF+S+ DC + +V+A+T +NG +F+ L+ D +NNL +
Sbjct: 667 KPPKKVMLVFFTGGVTFAEIAALRFVSQQADCPYRLVIASTAFVNGKTFLQSLVHDVENNLQR 729
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.310e-12 Identity = 29/61 (47.54%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 10 KKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDFQNNLVKT 192
K VM+VY IGG++F+E+AA+R+LSRHKD + I++ TTK++ G+ FI + +F+N L ++
Sbjct: 880 KTVMMVYFIGGVSFMEIAAMRYLSRHKDFPYSIIVCTTKLIGGNVFIESVFENFRNYLGRS 940
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A1W0A692_9STRA (Vacuolar protein sorting-associated protein 33A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A692_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 3.140e-12 Identity = 30/54 (55.56%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 1 EPRKKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLM 162
E +KVM+VY IGG+TF+E+AALR LS+ DC + I++ATTKI+NGS+ I ++
Sbjct: 570 EEERKVMVVYFIGGVTFMEIAALRHLSKQPDCPYDIIIATTKIINGSTLIKSIV 623
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A6A4Z605_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z605_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.220e-12 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 10 KKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLM 162
+KVM+V+ +GG+TF+E+AALR LS+ +C F IV+ATTKILNG+ I ++
Sbjct: 24 RKVMVVFFVGGVTFMEIAALRHLSKQPECPFDIVIATTKILNGNGLIKSIV 74
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A067BUK6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BUK6_SAPPC) HSP 1 Score: 67.8 bits (164), Expect = 1.090e-11 Identity = 29/51 (56.86%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 10 KKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLM 162
+KVM+VY IGG+TF+E+AALR LS+ +C + I++ATTKI+NGS+ I G++
Sbjct: 574 RKVMVVYFIGGVTFMEIAALRHLSKQPECPYDIIIATTKIINGSTLIKGVV 624
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A3R6WD50_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6WD50_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.150e-11 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 10 KKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLM 162
+KVM+V+ +GG+TF+E+AALR LS+ +C F IV+ATTKILNG+ I ++
Sbjct: 78 RKVMVVFFVGGVTFMEIAALRHLSKQPECPFDIVIATTKILNGNGLIKSIV 128
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Match: A0A024UDH5_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UDH5_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.790e-11 Identity = 29/51 (56.86%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 10 KKVMLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLM 162
++VM+VY +GG+TF+E+AALR LS+ +C F IV+ATTKILNG+S I ++
Sbjct: 576 RRVMVVYFVGGVTFMEIAALRHLSKQPECPFDIVIATTKILNGNSLIKSIV 626 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20506.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20506.1.1 >prot_P-wetherbeei_contig20506.1.1 ID=prot_P-wetherbeei_contig20506.1.1|Name=mRNA_P-wetherbeei_contig20506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp MLVYMIGGLTFLEVAALRFLSRHKDCEFGIVMATTKILNGSSFIAGLMPDback to top mRNA from alignment at P-wetherbeei_contig20506:735..1213- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20506.1.1 ID=mRNA_P-wetherbeei_contig20506.1.1|Name=mRNA_P-wetherbeei_contig20506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=479bp|location=Sequence derived from alignment at P-wetherbeei_contig20506:735..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20506:735..1213- >mRNA_P-wetherbeei_contig20506.1.1 ID=mRNA_P-wetherbeei_contig20506.1.1|Name=mRNA_P-wetherbeei_contig20506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig20506:735..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top |