mRNA_P-wetherbeei_contig20501.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20501.2.1
Unique NamemRNA_P-wetherbeei_contig20501.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1G0EHJ6_9PROT (Glycosyl transferase family 2 n=1 Tax=Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 TaxID=1798257 RepID=A0A1G0EHJ6_9PROT)

HSP 1 Score: 139 bits (350), Expect = 6.670e-39
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            ERLL+EG TG L   L+H A  + E+ L K++ YS+AGAAM   RG+ +SLPGAVL G W+F RTYVLRGGFLDGR GFMLAVSNAEG YYRYLKLMLLN++
Sbjct:  147 ERLLIEGETGQLDGELLHYAFDNFEEVLHKVDHYSSAGAAMLHRRGRPASLPGAVLRGLWSFLRTYVLRGGFLDGREGFMLAVSNAEGTYYRYLKLMLLNEK 248
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1F4DIQ1_9PROT (Glycosyl transferase family 2 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DIQ1_9PROT)

HSP 1 Score: 139 bits (350), Expect = 7.590e-39
Identity = 68/105 (64.76%), Postives = 81/105 (77.14%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQAIK 315
            +RL+V G TG LR+ +MHEAI DL+  L KMN YST  A M  +RG+R+SL  A+LHG W FFRTY LR GFLDGR GFMLAV+NAEG+YYRYLKLMLL+   +K
Sbjct:  147 DRLIVNGATGRLRQPIMHEAISDLDQMLTKMNVYSTTSAHMFHQRGRRASLATALLHGGWAFFRTYFLRLGFLDGREGFMLAVANAEGSYYRYLKLMLLSNGPVK 251
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1G0CWS9_9PROT (Glycosyl transferase family 2 n=1 Tax=Gallionellales bacterium RBG_16_56_9 TaxID=1798249 RepID=A0A1G0CWS9_9PROT)

HSP 1 Score: 138 bits (348), Expect = 1.370e-38
Identity = 67/102 (65.69%), Postives = 82/102 (80.39%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            ERLL++G TG L   L+H A  DLE+ L K+N YS+AGAAM  +RG+++SL GAVL G W+F R+Y LRGGFLDGR GFMLAVSNAEG YYRYLKL+LLN++
Sbjct:  148 ERLLIKGKTGRLDGELLHYAFDDLEEVLHKLNQYSSAGAAMMQQRGRQASLSGAVLRGLWSFIRSYFLRGGFLDGREGFMLAVSNAEGTYYRYLKLLLLNRK 249
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: UPI001983F6DD (Glycosyltransferase family 2 protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001983F6DD)

HSP 1 Score: 136 bits (342), Expect = 1.120e-37
Identity = 67/102 (65.69%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            ER++V+GTTG L   L+HEA  DLE+ L+K+N YS+AGA M    G+R SL  AVLHG WTF RTY L+ GFLDGR GFMLAVSNAEG YYRYLKLMLL ++
Sbjct:  149 ERVVVQGTTGRLEGRLLHEAFDDLEEVLDKVNQYSSAGARMGHAAGRRGSLTRAVLHGVWTFVRTYFLQAGFLDGRRGFMLAVSNAEGTYYRYLKLMLLGER 250
[Close]
BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1F3WRX4_9PROT (Glycosyl transferase family 2 n=1 Tax=Betaproteobacteria bacterium RBG_16_56_24 TaxID=1797475 RepID=A0A1F3WRX4_9PROT)

HSP 1 Score: 135 bits (341), Expect = 1.550e-37
Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            ERLLV+G  G L   L+H A  D E+ L K+N+YSTAGA M   RG+R+SL GAVL G W+F RTY LR GFLDGR GFMLAVSNAEG YYRYLKLM+LN++
Sbjct:  148 ERLLVDGKIGQLDGELLHYAFEDFEEVLSKINSYSTAGAEMLHRRGRRASLSGAVLRGLWSFIRTYFLRAGFLDGREGFMLAVSNAEGTYYRYLKLMMLNRK 249
[Close]
BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1F4D1C2_9PROT (Glycosyl transferase family 2 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D1C2_9PROT)

HSP 1 Score: 135 bits (341), Expect = 1.630e-37
Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            +RL+V G TG LR  +MHEAI DL+  L KMN YST+ A M+   G+++SL  A+LHG W FFRTYVLR GFLDGR GFMLAV+NAEG+YYRYLKLMLL+++
Sbjct:  147 DRLIVNGATGRLRAPIMHEAITDLDQMLVKMNMYSTSAAHMKLREGRKASLFTALLHGGWAFFRTYVLRLGFLDGREGFMLAVANAEGSYYRYLKLMLLSER 248
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A2W5G5I1_9RHOO (LPS biosynthesis protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2W5G5I1_9RHOO)

HSP 1 Score: 135 bits (340), Expect = 2.680e-37
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLML 294
            ERLL +G  G L++ L HEAI +LE+ LEKMNAYSTAGA M  +RG+R+ L  AV HG WTF RTY LR GFLDG+ GFMLAV NAEGAYYRY+KLML
Sbjct:  155 ERLLCDGPVGTLKQPLRHEAIQNLEEMLEKMNAYSTAGALMAHQRGRRAGLATAVGHGLWTFIRTYFLRAGFLDGKEGFMLAVCNAEGAYYRYVKLML 252
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BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1G0DPH3_9PROT (Glycosyl transferase family 2 n=2 Tax=unclassified Nitrosomonadales TaxID=1660158 RepID=A0A1G0DPH3_9PROT)

HSP 1 Score: 135 bits (339), Expect = 3.100e-37
Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLN 300
            ERLLV+G  G +   L+H A  +LE+ L K+N YS+AGAAM  +RG+ +SL GAVL G W+F RTY+LRGGFLDGR GFMLAVSNAEG YYRYLKLMLLN
Sbjct:  148 ERLLVKGQIGQIDGELLHYAFDNLEEVLHKVNRYSSAGAAMLQQRGRSASLSGAVLRGLWSFLRTYILRGGFLDGREGFMLAVSNAEGTYYRYLKLMLLN 247
[Close]
BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A7J5VSP4_9DELT (Family 2 glycosyl n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7J5VSP4_9DELT)

HSP 1 Score: 134 bits (336), Expect = 1.130e-36
Identity = 62/103 (60.19%), Postives = 81/103 (78.64%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQA 309
            ER++V+G+ G L+  ++H A  D+++ LE MN YST GA M  E+GKR +L  A+LHG W+FF+TYV+R GFLDGR GFMLA+SNAEG YYRYLKLMLL ++A
Sbjct:  157 ERIIVDGSLGRLKHPIIHAAFEDMDEVLETMNRYSTIGAKMMHEQGKRGTLSKAILHGLWSFFQTYVVRAGFLDGREGFMLALSNAEGTYYRYLKLMLLAEKA 259
[Close]
BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Match: A0A1F4AB51_9PROT (Glycosyl transferase family 2 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AB51_9PROT)

HSP 1 Score: 133 bits (334), Expect = 1.750e-36
Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 1 
Query:    1 ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSSLPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLNKQ 306
            +RL+V G TG L   +MHEAI DL+  L KMN YST  AAM    G+R+SL  A++HG W FFRTY+LR GFLDGR GFMLAV+NAEG+YYRYLKLMLL ++
Sbjct:  147 DRLIVNGATGKLTSPIMHEAITDLDQMLAKMNLYSTTSAAMFHHNGRRASLITALVHGGWAFFRTYLLRLGFLDGREGFMLAVANAEGSYYRYLKLMLLGER 248
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20501.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G0EHJ6_9PROT6.670e-3967.65Glycosyl transferase family 2 n=1 Tax=Gallionellal... [more]
A0A1F4DIQ1_9PROT7.590e-3964.76Glycosyl transferase family 2 n=1 Tax=Betaproteoba... [more]
A0A1G0CWS9_9PROT1.370e-3865.69Glycosyl transferase family 2 n=1 Tax=Gallionellal... [more]
UPI001983F6DD1.120e-3765.69Glycosyltransferase family 2 protein n=1 Tax=Burkh... [more]
A0A1F3WRX4_9PROT1.550e-3765.69Glycosyl transferase family 2 n=1 Tax=Betaproteoba... [more]
A0A1F4D1C2_9PROT1.630e-3764.71Glycosyl transferase family 2 n=1 Tax=Betaproteoba... [more]
A0A2W5G5I1_9RHOO2.680e-3768.37LPS biosynthesis protein n=3 Tax=Proteobacteria Ta... [more]
A0A1G0DPH3_9PROT3.100e-3767.00Glycosyl transferase family 2 n=2 Tax=unclassified... [more]
A0A7J5VSP4_9DELT1.130e-3660.19Family 2 glycosyl n=1 Tax=Desulfobulbaceae bacteri... [more]
A0A1F4AB51_9PROT1.750e-3663.73Glycosyl transferase family 2 n=1 Tax=Betaproteoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20501contigP-wetherbeei_contig20501:892..1221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog344747.PM8797T_05850
PFAMsGlycos_transf_2
Model size330
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.15e-35
EggNOG OGsCOG1216@1|root,COG1216@2|Bacteria,2IZV9@203682|Planctomycetes
DescriptionGlycosyl transferase, family 2
Cds size330
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186201.5142727-CDS-P-wetherbeei_contig20501:891..12211683186201.5142727-CDS-P-wetherbeei_contig20501:891..1221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20501 892..1221 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20501.2.1prot_P-wetherbeei_contig20501.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20501 892..1221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20501.2.1

>prot_P-wetherbeei_contig20501.2.1 ID=prot_P-wetherbeei_contig20501.2.1|Name=mRNA_P-wetherbeei_contig20501.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
ERLLVEGTTGALRESLMHEAIIDLEDALEKMNAYSTAGAAMQFERGKRSS
LPGAVLHGAWTFFRTYVLRGGFLDGRAGFMLAVSNAEGAYYRYLKLMLLN
KQAIKRLSE*
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mRNA from alignment at P-wetherbeei_contig20501:892..1221-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20501.2.1 ID=mRNA_P-wetherbeei_contig20501.2.1|Name=mRNA_P-wetherbeei_contig20501.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig20501:892..1221- (Phaeothamnion wetherbeei SAG_119_79)
GAGCGGCTGTTGGTCGAGGGCACAACCGGCGCCCTGCGCGAGTCGCTGAT
GCACGAGGCCATCATCGACCTCGAAGACGCGCTCGAAAAGATGAATGCAT
ACTCGACTGCCGGCGCCGCCATGCAGTTCGAGCGCGGCAAGCGTTCTTCG
CTTCCCGGTGCGGTACTGCACGGCGCGTGGACTTTTTTCCGCACCTATGT
GCTGCGCGGCGGCTTTCTCGACGGACGCGCAGGTTTCATGCTCGCGGTGT
CGAATGCCGAGGGGGCGTATTACCGTTATTTAAAATTGATGCTGCTAAAT
AAGCAGGCAATTAAGCGATTGAGCGAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20501:892..1221-

>mRNA_P-wetherbeei_contig20501.2.1 ID=mRNA_P-wetherbeei_contig20501.2.1|Name=mRNA_P-wetherbeei_contig20501.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig20501:892..1221- (Phaeothamnion wetherbeei SAG_119_79)
GAGCGGCTGTTGGTCGAGGGCACAACCGGCGCCCTGCGCGAGTCGCTGAT
GCACGAGGCCATCATCGACCTCGAAGACGCGCTCGAAAAGATGAATGCAT
ACTCGACTGCCGGCGCCGCCATGCAGTTCGAGCGCGGCAAGCGTTCTTCG
CTTCCCGGTGCGGTACTGCACGGCGCGTGGACTTTTTTCCGCACCTATGT
GCTGCGCGGCGGCTTTCTCGACGGACGCGCAGGTTTCATGCTCGCGGTGT
CGAATGCCGAGGGGGCGTATTACCGTTATTTAAAATTGATGCTGCTAAAT
AAGCAGGCAATTAAGCGATTGAGCGAATAG
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