mRNA_P-wetherbeei_contig2050.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2050.2.1
Unique NamemRNA_P-wetherbeei_contig2050.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A836CHZ2_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ2_9STRA)

HSP 1 Score: 374 bits (961), Expect = 1.480e-127
Identity = 185/247 (74.90%), Postives = 212/247 (85.83%), Query Frame = 1
Query:   13 LKIGNLPPIRKGPVLAVGIEGSANKVGVGIVRYTPD----DGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARR 741
            L++GNLPP +  P+LA+GIEGSANKVGVG+VRYTP     DGEG Y+ILANPRKTYVTPPG GFLPR+TA HHQQHI ALVR AL +A V  + V+VIC+TKGPGMGGPL +CA+CARTLS LWG PL+  NHCVGHIEMGRVATNC DPV+LYVSGGNTQ     VI+++M RYRIFGETID+AIGNCLDRFAR LGLSNDPSPGYNIEQLA +G  +F+ELPY VKGMDVSFSG+LSF++KEAR+
Sbjct:    3 LQLGNLPPKQDVPLLALGIEGSANKVGVGLVRYTPSRTGGDGEGTYEILANPRKTYVTPPGVGFLPRQTAQHHQQHITALVRLALKQAGVGAADVSVICFTKGPGMGGPLCACAVCARTLSQLWGKPLMAVNHCVGHIEMGRVATNCKDPVVLYVSGGNTQ-----VISFAMGRYRIFGETIDIAIGNCLDRFARVLGLSNDPSPGYNIEQLALQG-KVFIELPYIVKGMDVSFSGLLSFIEKEARQ 243          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A7S2W3U1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3U1_9STRA)

HSP 1 Score: 363 bits (933), Expect = 1.640e-122
Identity = 179/246 (72.76%), Postives = 206/246 (83.74%), Query Frame = 1
Query:   22 GNLPPI--RKGPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            GNLPP+  R G ++A+GIEGSANKVGVG++ YTP      Y IL+NPRKTYV PPG GF+PRET  HHQ HIV L+R AL +A +EPS V++ICYTKGPGMGGPLQSCA+CARTLS LW VPLVG NHCVGHIEMGRVATN  DPV+LYVSGGNTQ     VIAYSM RY+IFGETID+A+GNCLDRFAR +GLSNDPSPGYNIEQLAK  G+ F+ELPY VKGMDVSFSG+LSF++KEA R++ +
Sbjct:   62 GNLPPVPGRDGRLIALGIEGSANKVGVGVLLYTPPS---TYSILSNPRKTYVAPPGHGFMPRETQKHHQAHIVGLIRTALEQAGLEPSQVDLICYTKGPGMGGPLQSCAICARTLSQLWSVPLVGVNHCVGHIEMGRVATNVHDPVVLYVSGGNTQ-----VIAYSMRRYQIFGETIDIAVGNCLDRFARVIGLSNDPSPGYNIEQLAK-SGTKFIELPYAVKGMDVSFSGLLSFIEKEAHRLLKS 298          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A6U1PPX4_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PPX4_9STRA)

HSP 1 Score: 356 bits (913), Expect = 4.920e-120
Identity = 172/241 (71.37%), Postives = 202/241 (83.82%), Query Frame = 1
Query:   19 IGNLPPIRKGPVLAV-GIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEAR 738
            IGN+ P   G ++ V GIEGSANKVGVGIVRY+ D+    Y+IL NPRKTYVTPPG GFLPRETAWHHQQHIV LVR AL EA +  + ++ I +TKGPGMGGPL+SCA+CAR LSLLW VPL+G NHC+GH+EMGRVAT C +P++LYVSGGNTQ     VIAYS+ +YRIFGETID+A+GNCLDRFAR LGLSNDPSPGYNIEQ+AK G + ++ELPY VKGMDVSFSG+L+FV+KEAR
Sbjct:   23 IGNIAPKVGGSIVTVLGIEGSANKVGVGIVRYSKDNASEPYEILCNPRKTYVTPPGQGFLPRETAWHHQQHIVPLVRLALNEAGLSSADIDAIAFTKGPGMGGPLRSCAVCARMLSLLWKVPLIGVNHCIGHVEMGRVATGCKNPIVLYVSGGNTQ-----VIAYSLRKYRIFGETIDLAVGNCLDRFARVLGLSNDPSPGYNIEQVAKLGKN-YIELPYVVKGMDVSFSGLLTFVEKEAR 257          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A7S3HK42_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK42_9STRA)

HSP 1 Score: 345 bits (885), Expect = 4.650e-116
Identity = 173/252 (68.65%), Postives = 206/252 (81.75%), Query Frame = 1
Query:   13 LKIGNLPPI-RKGPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAK----RGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            + IGNLP + +K  V+A+GIEGSANKVGVGIVRY+    EG Y+IL+NPRKTY+TP G GFLPRETAWHHQQHI ALVR AL EA +  + V+ ICYTKGPGMGGPL+SCA+CAR LSLLW  PLVG NHCV HIEMGRVAT C++PV+LYVSGGNTQ     VIAYS +RYRIFGETID+A+GNCLDRFAR L +SNDPSPGYNIEQ+AK     G   ++ELPY VKGMDVSFSG+L++++ EA+  +++
Sbjct:    1 MDIGNLPTLLKKDVVIALGIEGSANKVGVGIVRYS----EGSYEILSNPRKTYITPAGQGFLPRETAWHHQQHINALVRHALQEANLSAAEVDCICYTKGPGMGGPLRSCAVCARMLSLLWKRPLVGVNHCVAHIEMGRVATKCSNPVVLYVSGGNTQ-----VIAYSNNRYRIFGETIDIAVGNCLDRFARVLQMSNDPSPGYNIEQMAKSSLNNGVRKYIELPYVVKGMDVSFSGLLTYIEGEAKNKLAS 243          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A8K1CIJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIJ7_PYTOL)

HSP 1 Score: 342 bits (878), Expect = 4.860e-115
Identity = 168/241 (69.71%), Postives = 196/241 (81.33%), Query Frame = 1
Query:   34 PIRK-GPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            P+RK G V+A+GIEGSANK+GVGI+RY  D   GE +ILANPRKTY+TPPG GFLPRETAWHHQ H+  +VRAAL EA + P  ++ ICYTKGPGMG PL+S A+CAR LSLLW  PLVG NHCVGHIEMGR  T  ADPV+LYVSGGNTQ     VIAYSM RYRIFGETID+A+GNCLDRFAR + LSNDPSPG NIE++A R GS ++ELPY VKGMDVSFSG+ +F++KEA+  V +
Sbjct:    9 PVRKDGDVIALGIEGSANKLGVGIIRYKQD---GETEILANPRKTYITPPGQGFLPRETAWHHQNHVNGIVRAALLEANISPKEIDCICYTKGPGMGAPLRSAAICARMLSLLWKKPLVGVNHCVGHIEMGRTVTKSADPVVLYVSGGNTQ-----VIAYSMQRYRIFGETIDIAVGNCLDRFARVINLSNDPSPGQNIEEMA-RNGSKYIELPYIVKGMDVSFSGLSTFIEKEAKEKVES 240          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A2D4BH80_PYTIN (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH80_PYTIN)

HSP 1 Score: 342 bits (876), Expect = 8.280e-115
Identity = 170/242 (70.25%), Postives = 194/242 (80.17%), Query Frame = 1
Query:   40 RKGPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHR----YRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            + G V+A+GIEGSANK+GVGI+RY  D   GE  IL+NPRKTY+TPPG GFLPRETAWHHQ H V +VRAAL EA + P  ++VICYTKGPGMGGPL+S A+CAR LSLLW  PLVG NHCVGHIEMGR  T  ADPV+LYVSGGNTQ     VIAYSM R    YRIFGETID+A+GNCLDRFAR +GLSNDPSPGYNIE LA R G  F+ELPY VKGMDVSFSG+ +F++KEA+  + A
Sbjct:   11 KDGDVIALGIEGSANKLGVGIIRYRQD---GETDILSNPRKTYITPPGQGFLPRETAWHHQNHAVGIVRAALVEANISPKDIDVICYTKGPGMGGPLRSAAVCARMLSLLWKKPLVGVNHCVGHIEMGRTVTKSADPVVLYVSGGNTQ-----VIAYSMQRAMNSYRIFGETIDIAVGNCLDRFARVIGLSNDPSPGYNIEVLA-RNGKKFIELPYIVKGMDVSFSGLSTFIEKEAKEKLDA 243          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: K3WK29_GLOUD (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK29_GLOUD)

HSP 1 Score: 339 bits (869), Expect = 1.090e-113
Identity = 166/236 (70.34%), Postives = 192/236 (81.36%), Query Frame = 1
Query:   34 PIRK-GPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEAR 738
            P+RK G V+A+G+EGSANK+ VGI+RY  D   GE  IL+NPRKTY+TPPG GFLPRETAWHHQ H+  +VRAAL EA V P  ++ ICYTKGPGMG PL+S A+CAR LSLLW  PLVG NHCVGHIEMGR  T  +DPV+LYVSGGNTQ     VIAYSM RYRIFGETID+A+GNCLDRFAR +GLSNDPSPGYNIE LA+ G   F+ELPY VKGMDVSFSG+ +F++KEA+
Sbjct:    8 PLRKRGDVIAMGVEGSANKLAVGIIRYRED---GETDILSNPRKTYITPPGQGFLPRETAWHHQNHVNGIVRAALVEANVTPQEIDCICYTKGPGMGAPLRSAAVCARMLSLLWKKPLVGVNHCVGHIEMGRTVTKSSDPVVLYVSGGNTQ-----VIAYSMQRYRIFGETIDIAVGNCLDRFARVIGLSNDPSPGYNIEVLAREGKK-FIELPYIVKGMDVSFSGLATFIEKEAK 234          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: H3G886_PHYRM (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3G886_PHYRM)

HSP 1 Score: 337 bits (864), Expect = 3.680e-113
Identity = 165/225 (73.33%), Postives = 185/225 (82.22%), Query Frame = 1
Query:   61 VGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEA 735
            +GIEGSANK+GVGI+RY  D   GE +IL+NPRKTY+TPPG GFLPRETAWHHQ H+V +VR AL EA V P  ++ ICYTKGPGMGGPL+S A+CAR LSLLW  PLVG NHCVGHIEMGR  T  ADPV+LYVSGGNTQ     VIAYSM  YRIFGETID+A+GNCLDRFAR LGLSNDPSPGYNIE LA+ G   F+ELPY VKGMDVSFSGI +F++KEA
Sbjct:    1 MGIEGSANKLGVGIIRYRAD---GETEILSNPRKTYITPPGQGFLPRETAWHHQNHVVGIVRVALAEANVSPQQLDCICYTKGPGMGGPLRSAAVCARMLSLLWNKPLVGVNHCVGHIEMGRTVTKAADPVVLYVSGGNTQ-----VIAYSMQCYRIFGETIDIAVGNCLDRFARVLGLSNDPSPGYNIEVLAREGKK-FIELPYIVKGMDVSFSGISTFIEKEA 216          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: F0W7Z9_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Albugo TaxID=65356 RepID=F0W7Z9_9STRA)

HSP 1 Score: 332 bits (852), Expect = 6.150e-111
Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 1
Query:   52 VLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            V+A+GIE SANK+GVGI+RY+     G+ +ILANPRKTY+TPPG GFLPRETAWHHQ HI  ++RAA+TEA ++   ++VICYTKGPGMGGPL+S A+CAR LSLLW  PLVG NHCVGHIEMGR  T   +PVILYVSGGNTQ     VI+YSM RYRIFGETID+A+GNCLDRFAR L LSNDPSPGYNIE LAK G   ++ELPY VKGMDVSFSG+L++++KEA+  + A
Sbjct:   27 VIAIGIEASANKIGVGILRYSQC---GDSEILANPRKTYITPPGQGFLPRETAWHHQNHITGIIRAAITEADIKIDDIDVICYTKGPGMGGPLRSAAVCARMLSLLWKKPLVGVNHCVGHIEMGRTVTKAWNPVILYVSGGNTQ-----VISYSMQRYRIFGETIDIAVGNCLDRFARVLELSNDPSPGYNIEMLAKDGKQ-YIELPYIVKGMDVSFSGLLTYIEKEAKEKLDA 251          
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Match: A0A1Z5K0M3_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0M3_FISSO)

HSP 1 Score: 332 bits (852), Expect = 8.240e-111
Identity = 162/243 (66.67%), Postives = 192/243 (79.01%), Query Frame = 1
Query:   25 NLPPIRKGPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILANPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICYTKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADPVILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLSNDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVSA 753
            ++P    G    +GIEGSANK+G+G+++Y P   E  Y I ANPRKTYV P G GFLP++TAWHHQQH+V L+RAALTEAAV    +  IC+T+GPGMG PLQSC + ARTLSLLW +PLVG NHCVGHIEMGR+A    +PV+LYVSGGNTQ     VIAYS  RYRIFGETID+A+GNCLDRFAR L LSNDPSPGYNIEQ AKR G+ F+ELPYTVKGMDVSFSGIL+ V++ A+ + S+
Sbjct:   24 HIPSAANGITYVLGIEGSANKIGIGVLQYDPS--EETYYIRANPRKTYVAPTGHGFLPKQTAWHHQQHVVPLIRAALTEAAVTLQQIAAICFTQGPGMGAPLQSCVIAARTLSLLWDIPLVGVNHCVGHIEMGRIACQATNPVVLYVSGGNTQ-----VIAYSNQRYRIFGETIDIAVGNCLDRFARVLHLSNDPSPGYNIEQAAKRAGNRFLELPYTVKGMDVSFSGILTQVEQYAKALSSS 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2050.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHZ2_9STRA1.480e-12774.90Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2W3U1_9STRA1.640e-12272.76Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A6U1PPX4_9STRA4.920e-12071.37Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S3HK42_9STRA4.650e-11668.65Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A8K1CIJ7_PYTOL4.860e-11569.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BH80_PYTIN8.280e-11570.25Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
K3WK29_GLOUD1.090e-11370.34Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
H3G886_PHYRM3.680e-11373.33Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
F0W7Z9_9STRA6.150e-11169.23Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A1Z5K0M3_FISSO8.240e-11166.67Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2050contigP-wetherbeei_contig2050:438..2056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4792.ETI49501
PFAMsPeptidase_M22
Model size753
Max annot lvl4776|Peronosporales
KEGG rclassRC00070,RC00416
KEGG koko:K01409
KEGG ReactionR10648
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.44e-117
EggNOG OGsCOG0533@1|root,KOG2708@2759|Eukaryota,3QCZY@4776|Peronosporales
EC2.3.1.234
DescriptionComponent of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity
Cds size753
COG categoryO
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186201.4022393-CDS-P-wetherbeei_contig2050:437..6061683186201.4022393-CDS-P-wetherbeei_contig2050:437..606Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2050 438..606 -
1683186201.4137118-CDS-P-wetherbeei_contig2050:943..10291683186201.4137118-CDS-P-wetherbeei_contig2050:943..1029Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2050 944..1029 -
1683186201.4222555-CDS-P-wetherbeei_contig2050:1352..16251683186201.4222555-CDS-P-wetherbeei_contig2050:1352..1625Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2050 1353..1625 -
1683186201.4319632-CDS-P-wetherbeei_contig2050:1831..20561683186201.4319632-CDS-P-wetherbeei_contig2050:1831..2056Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2050 1832..2056 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2050.2.1prot_P-wetherbeei_contig2050.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2050 438..2056 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2050.2.1

>prot_P-wetherbeei_contig2050.2.1 ID=prot_P-wetherbeei_contig2050.2.1|Name=mRNA_P-wetherbeei_contig2050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MPESLKIGNLPPIRKGPVLAVGIEGSANKVGVGIVRYTPDDGEGEYKILA
NPRKTYVTPPGTGFLPRETAWHHQQHIVALVRAALTEAAVEPSAVNVICY
TKGPGMGGPLQSCALCARTLSLLWGVPLVGTNHCVGHIEMGRVATNCADP
VILYVSGGNTQASDGRVIAYSMHRYRIFGETIDMAIGNCLDRFARELGLS
NDPSPGYNIEQLAKRGGSIFVELPYTVKGMDVSFSGILSFVQKEARRVVS
A
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mRNA from alignment at P-wetherbeei_contig2050:438..2056-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2050.2.1 ID=mRNA_P-wetherbeei_contig2050.2.1|Name=mRNA_P-wetherbeei_contig2050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1619bp|location=Sequence derived from alignment at P-wetherbeei_contig2050:438..2056- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTGAAAGCCTAAAAATCGGCAATTTGCCCCCGATACGGAAAGGGCC TGTCCTCGCAGTCGGGATAGAGGGCAGTGCAAACAAAGTGGGCGTCGGGA TTGTGAGGTACACGCCCGACGATGGCGAGGGCGAGTACAAAATCCTCGCA AATCCGAGAAAAACGTACGTCACGCCGCCAGGCACGGGTTTTTTGCCGAG AGAGACAGCGTGGCACCATCAACAGGTGATGATCTCTTCTTCCCCGAGGT CTGGATGACGTCGCCGTTTCCTGACGTTGCAGCCTGCCTGCCTCTTAGCT TTACGAGCCCTCCCTTTGGCCCACTTTCCTGAAGGGGCAGCAGCGGCGAA GGAAGACCTCTTGATGCCGCTCCTCCCCTTTCCCGTCGCCTCTTTCCTCC CAATTCCGCTCGCACTTCTTCGTGCGAAAAGCACATCGTGGCACTGGTGC GTGCGGCCTTGACCGAAGCCGCTGTCGAGCCCTCCGCCGTCAACGTCATT TGCTACACCAAGGGGCCCGGCATGGGCGGACCCCTCCAGTCGTGCGCCCT TTGCGCGCGGACGCTATCGCTGCTGTGGGGCGTCCCACTGGTGGGGACGA ACCACTGCGTTGGCCACATCGAGATGGGGCGCGTCGCGACCAACTGCGCC GACCCCGTCATCCTCTACGTATCCGGCGGTAACACACAGGCGAGCGACGG ACGGGTTCCCGTGCCGTTTCCCTGGAGGCCGGTCAGCAAATATATCTTTA TGCCATTGTTTCTTTCAGGTCATTTGGCGTGTTAAAACCGATTCACTGAT CATGTTAAATGATCCGCCACCCAAGTTTTAGCTAGCTTTGCAAATTTCAC CGGCCACAAGCTTTTCGGTTTCCACGTGCTACCGTCTACGCGCTGTATCG CCCTTGATTTGAAGGTTTTGGCCGCGGTGGTCACTGTGTGTCAACTTTTC CACCGTCCATCACATCCATGCCGGCTGCCATTGCCATTTGATTGACGACG ATGCGGCGGCGATGGCGAATTCCGCAGGTGATTGCTTATTCGATGCACCG ATATCGAATATTCGGAGAGACCATCGACATGGCCATTGGGAACTGCCTTG ACCGCTTTGCCAGGTGAGAGGGAAGCTACATTTCGGGGCGTTCCTTTAGG AGTATTCGTTGGCTTTTCCTTCCTTGCCAAAAGTGTTCTCTATCTATTCG TCCCTTCTACCAGTCTGCCACCTTGGATATGGCTGCCACACGACCCTGCA TTCATTCTTGTTCTTAGTGTTTCGTCCAGGGGTCTCCCAGCATTCTCCCC TTTACCTGCGCGCTTCCCTTCCTTGCCTCCCCGCCGCGCTATCGCCCCAC CCCTGCTGCATCCTCTCAAAACAAAATCAACGACGACGCAAAAACAAATG GAAACCAACACAAAACCAAACGCAAAAACAAACCGGACAAAGCAACTCAG GGAGCTGGGCCTGTCCAACGACCCGTCGCCGGGCTACAACATTGAGCAGC TGGCAAAGCGCGGCGGCAGCATATTCGTGGAGCTGCCGTACACTGTGAAG GGGATGGACGTTTCCTTCAGCGGCATCCTCTCCTTCGTGCAGAAGGAGGC CAGGCGAGTCGTGTCAGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2050:438..2056-

>mRNA_P-wetherbeei_contig2050.2.1 ID=mRNA_P-wetherbeei_contig2050.2.1|Name=mRNA_P-wetherbeei_contig2050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig2050:438..2056- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTGAAAGCCTAAAAATCGGCAATTTGCCCCCGATACGGAAAGGGCC
TGTCCTCGCAGTCGGGATAGAGGGCAGTGCAAACAAAGTGGGCGTCGGGA
TTGTGAGGTACACGCCCGACGATGGCGAGGGCGAGTACAAAATCCTCGCA
AATCCGAGAAAAACGTACGTCACGCCGCCAGGCACGGGTTTTTTGCCGAG
AGAGACAGCGTGGCACCATCAACAGCACATCGTGGCACTGGTGCGTGCGG
CCTTGACCGAAGCCGCTGTCGAGCCCTCCGCCGTCAACGTCATTTGCTAC
ACCAAGGGGCCCGGCATGGGCGGACCCCTCCAGTCGTGCGCCCTTTGCGC
GCGGACGCTATCGCTGCTGTGGGGCGTCCCACTGGTGGGGACGAACCACT
GCGTTGGCCACATCGAGATGGGGCGCGTCGCGACCAACTGCGCCGACCCC
GTCATCCTCTACGTATCCGGCGGTAACACACAGGCGAGCGACGGACGGGT
GATTGCTTATTCGATGCACCGATATCGAATATTCGGAGAGACCATCGACA
TGGCCATTGGGAACTGCCTTGACCGCTTTGCCAGGGAGCTGGGCCTGTCC
AACGACCCGTCGCCGGGCTACAACATTGAGCAGCTGGCAAAGCGCGGCGG
CAGCATATTCGTGGAGCTGCCGTACACTGTGAAGGGGATGGACGTTTCCT
TCAGCGGCATCCTCTCCTTCGTGCAGAAGGAGGCCAGGCGAGTCGTGTCA
GCA
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