mRNA_P-wetherbeei_contig20491.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20491.1.1
Unique NamemRNA_P-wetherbeei_contig20491.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: A0A3C0TUG4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUG4_9PROT)

HSP 1 Score: 196 bits (497), Expect = 2.010e-58
Identity = 94/153 (61.44%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    1 MTASNALITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQGGDKTVIDNKVAVAQSYVVQIGDTTGEIFRIGDARRVVADI 459
            M+A  ALITQIY+GYFNRAPDP+GL YW   L  GM  AAIA SF+ Q EA+S Y+YL  P  G+ DAFL+++Y NLF  APDA GL+YWKGEL +G+P G +I+DII GAQG D+TV+DNK   AQ+YV  +G   GE FRIGDARR V D+
Sbjct:    1 MSAQAALITQIYVGYFNRAPDPSGLTYWFSQLQSGMPAAAIASSFAGQPEALSLYSYLNQPAAGNTDAFLSAIYENLFGRAPDAGGLNYWKGELLSGRPAGQIILDIIQGAQGNDRTVLDNKTVAAQAYVDHLGSVAGESFRIGDARRAVTDV 153          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI001A972FD6 (DUF4214 domain-containing protein n=1 Tax=Roseomonas marmotae TaxID=2768161 RepID=UPI001A972FD6)

HSP 1 Score: 147 bits (370), Expect = 2.780e-38
Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 1
Query:   10 SNALITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQGGDKTVIDNKVAVAQSYVVQI 399
            S A ITQ+YIGYF RA DPAGLNYW G    GM +A IA SF+ Q EA ++Y YLA P   S   F+T VY NLFN APDA G++YW+G+LA+G+ VG VI+DII+GAQG D T++ NKV  A  Y  Q+
Sbjct:    2 SVATITQLYIGYFGRAADPAGLNYWVGQENAGMQLADIARSFAVQTEATTNYPYLALPNIASSAGFITQVYQNLFNRAPDAEGMTYWQGQLASGRSVGQVILDIINGAQGDDATIVANKVEAAAFYTDQV 131          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI001FAD47DB (DUF4214 domain-containing protein n=1 Tax=Sulfitobacter sp. DSM 110093 TaxID=2883127 RepID=UPI001FAD47DB)

HSP 1 Score: 137 bits (344), Expect = 1.820e-34
Identity = 77/137 (56.20%), Postives = 93/137 (67.88%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGG--MSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQ----GGDKTVIDNKVAVAQSYVVQIGDTTG 414
            I Q+YIGYF+RAP+P GLNYW   L     MS   IA+SFS Q EA   Y +LANP   S +AF+T+VY NLFN APDA GL+YW+GELAAGK  G +IIDI SGAQ    G D T+++NK AVA  +V    D +G
Sbjct:   10 IVQLYIGYFDRAPNPTGLNYWINELDNNPDMSYLDIAQSFSVQPEATGLYPFLANPQVASPEAFITAVYLNLFNRAPDADGLAYWEGELAAGKSPGRMIIDIQSGAQDSADGQDLTILNNKTAVALDWVQSTADISG 146          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI000D383CB0 (DUF4214 domain-containing protein n=1 Tax=Devosia submarina TaxID=1173082 RepID=UPI000D383CB0)

HSP 1 Score: 135 bits (339), Expect = 3.940e-34
Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQGG--DKTVIDNKVAVAQSYVVQIGDTTGEIF 423
            IT +YIGYF RAPDP GLNYW G L  G S+A IAESFS Q E+ + Y YLANP   S  AF+T VY NLFN  PDA GL+YW  +L  G  +G  I+D+ISGA     D+ +IDNKV     +  +  D  G ++
Sbjct:    7 ITSLYIGYFGRAPDPVGLNYWVGRLNDGFSLAEIAESFSVQAESQAKYPYLANPNIASPQAFITQVYLNLFNRTPDAEGLAYWTAQLNNGTDIGDFILDVISGAVNNPSDQAIIDNKVEAGVYFAREAADLPGFVY 142          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: A0A7X6GW85_9RHOB (DUF4214 domain-containing protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A7X6GW85_9RHOB)

HSP 1 Score: 135 bits (339), Expect = 8.570e-34
Identity = 77/137 (56.20%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGG--MSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQ----GGDKTVIDNKVAVAQSYVVQIGDTTG 414
            I Q+YIGYF+RAP+PAGL YW   L     MS   IA+SFS Q EA   Y +LANP   S +AF+T+VY NLFN APDAAGL+YW+GELAAGK  G +IIDI SGAQ    G D T+++NK  VA  +V    D  G
Sbjct:   10 IVQLYIGYFDRAPNPAGLAYWINELDNNPDMSYLDIAQSFSVQPEATGLYPFLANPQVASPEAFITAVYLNLFNRAPDAAGLAYWEGELAAGKSPGRMIIDIQSGAQDSAAGQDLTILNNKTEVALDWVQSTADIPG 146          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: A0A2G1YHC4_9SPHN (DUF4214 domain-containing protein n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=A0A2G1YHC4_9SPHN)

HSP 1 Score: 135 bits (339), Expect = 8.580e-34
Identity = 76/137 (55.47%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGG--MSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQ----GGDKTVIDNKVAVAQSYVVQIGDTTG 414
            I Q+YIGYF+RAPDP+GL YW   L     MS   IA+SFS Q EA + Y +LANP   S +AF+T+VY NLFN APDA GL+YW+GELAAGK  G +IIDI SGAQ    G D T+++NK  VA  +V    D  G
Sbjct:   10 IVQLYIGYFDRAPDPSGLAYWINELDNNPNMSFVDIAQSFSVQPEATALYPFLANPQVASPEAFITAVYLNLFNRAPDAEGLAYWEGELAAGKSPGRMIIDIQSGAQDSAAGQDLTILNNKTEVALDWVQSAADIPG 146          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: A0A7X6JV52_9RHOB (DUF4214 domain-containing protein n=1 Tax=Rhodobacteraceae bacterium R_SAG2 TaxID=2719004 RepID=A0A7X6JV52_9RHOB)

HSP 1 Score: 134 bits (337), Expect = 1.590e-33
Identity = 76/137 (55.47%), Postives = 90/137 (65.69%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGG--MSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQ----GGDKTVIDNKVAVAQSYVVQIGDTTG 414
            I Q+YIGYF+RAP+P GLNYW   L     MS   IA+SFS Q EA   Y +LANP   S +AF+T+VY NLFN APDA GL+YW GELA GK  G +IIDI SGAQ    G D T+++NK AVA  +V    D  G
Sbjct:   10 IVQLYIGYFDRAPNPTGLNYWINELDNNPNMSYLDIAQSFSVQPEATGLYPFLANPQVASPEAFITAVYLNLFNRAPDADGLAYWVGELAGGKSAGRMIIDIQSGAQDSAAGQDLTILNNKTAVALDWVQSTADIPG 146          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI001FAD077A (DUF4214 domain-containing protein n=1 Tax=Sulfitobacter dubius TaxID=218673 RepID=UPI001FAD077A)

HSP 1 Score: 134 bits (337), Expect = 1.590e-33
Identity = 76/137 (55.47%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGG--MSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQ----GGDKTVIDNKVAVAQSYVVQIGDTTG 414
            I Q+YIGYF+RAP+P GLNYW   L     MS   IA+SFS Q EA   Y +LANP   S +AF+T+VY NLFN APD  GL+YW+GELAAGK  G +IIDI SGAQ    G D T+++NK AVA  +V    D +G
Sbjct:   10 IVQLYIGYFDRAPNPTGLNYWINELDNNPDMSYLDIAQSFSVQPEATGLYPFLANPQLASPEAFITAVYLNLFNRAPDDDGLAYWEGELAAGKSPGRMIIDIQSGAQDSADGQDLTILNNKTAVALDWVQSTADISG 146          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI000D343EDA (DUF4214 domain-containing protein n=1 Tax=Devosia naphthalenivorans TaxID=2082392 RepID=UPI000D343EDA)

HSP 1 Score: 134 bits (336), Expect = 1.830e-33
Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 1
Query:   22 ITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGEAVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGA-QGGDKTVIDNKVAVAQSYVVQIGDTTGEIFRIGDARRVVADID 462
            IT +YIGYF RAPDP GLNYW G LA G ++A  AESFS Q E+ + Y YLANP   S  AF+T VY NLFN  PDA GL+YW  EL  G  VG  I+++ISGA    D T++ NKV V   + +   +  G ++    A   +  ID
Sbjct:    7 ITSLYIGYFGRAPDPEGLNYWVGRLAEGYTLAEAAESFSVQSESTTKYPYLANPNIASPQAFITQVYMNLFNRVPDAEGLAYWTAELENGADVGDFILNVISGAVTEPDATIVANKVEVGADFALSAANEEGFVYDDAAASAAIGVID 154          
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Match: UPI000EA199B3 (DUF4214 domain-containing protein n=1 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=UPI000EA199B3)

HSP 1 Score: 129 bits (324), Expect = 9.150e-32
Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 1
Query:    1 MTASNALITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGEAVSSYAYLAN------PVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPVGGVIIDIISGAQGGDKTVIDNKVAVAQSY 387
            M+ S  LIT++YIGYF+RAPDP GL +W G L GG+SI AIA+ F+ Q EA ++Y +L        P    ++AF+T++Y+NLF+ AP+ AGL++W G L  G PVG  I+ II GA   D+ V+DNK+ VA ++
Sbjct:    1 MSTSKELITELYIGYFDRAPDPEGLTFWIGVLEGGLSIEAIAQDFAGQAEAQATYDFLDTSGPDLPPSETEVEAFITAIYDNLFDRAPEPAGLTFWTGVLQDGYPVGEFILAIIGGASAADRVVLDNKIEVACAW 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20491.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TUG4_9PROT2.010e-5861.44Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
UPI001A972FD62.780e-3857.69DUF4214 domain-containing protein n=1 Tax=Roseomon... [more]
UPI001FAD47DB1.820e-3456.20DUF4214 domain-containing protein n=1 Tax=Sulfitob... [more]
UPI000D383CB03.940e-3451.47DUF4214 domain-containing protein n=1 Tax=Devosia ... [more]
A0A7X6GW85_9RHOB8.570e-3456.20DUF4214 domain-containing protein n=2 Tax=Rhodobac... [more]
A0A2G1YHC4_9SPHN8.580e-3455.47DUF4214 domain-containing protein n=1 Tax=Sphingob... [more]
A0A7X6JV52_9RHOB1.590e-3355.47DUF4214 domain-containing protein n=1 Tax=Rhodobac... [more]
UPI001FAD077A1.590e-3355.47DUF4214 domain-containing protein n=1 Tax=Sulfitob... [more]
UPI000D343EDA1.830e-3348.65DUF4214 domain-containing protein n=1 Tax=Devosia ... [more]
UPI000EA199B39.150e-3248.15DUF4214 domain-containing protein n=1 Tax=Sulfitob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20491contigP-wetherbeei_contig20491:328..789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog83219.PM02_18200
PFAMsDUF4214
Model size462
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.87e-32
EggNOG OGsCOG0823@1|root,COG2373@1|root,COG2931@1|root,COG4932@1|root,COG5295@1|root,COG0823@2|Bacteria,COG2373@2|Bacteria,COG2931@2|Bacteria,COG4932@2|Bacteria,COG5295@2|Bacteria,1NEXT@1224|Proteobacteria,2TWJE@28211|Alphaproteobacteria,3ZZDP@60136|Sulfitobacter
DescriptionDomain of unknown function (DUF4214)
Cds size462
COG categoryQU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186201.1095152-CDS-P-wetherbeei_contig20491:327..7891683186201.1095152-CDS-P-wetherbeei_contig20491:327..789Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20491 328..789 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20491.1.1prot_P-wetherbeei_contig20491.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20491 328..789 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20491.1.1

>prot_P-wetherbeei_contig20491.1.1 ID=prot_P-wetherbeei_contig20491.1.1|Name=mRNA_P-wetherbeei_contig20491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MTASNALITQIYIGYFNRAPDPAGLNYWTGNLAGGMSIAAIAESFSRQGE
AVSSYAYLANPVGGSIDAFLTSVYNNLFNHAPDAAGLSYWKGELAAGKPV
GGVIIDIISGAQGGDKTVIDNKVAVAQSYVVQIGDTTGEIFRIGDARRVV
ADID
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mRNA from alignment at P-wetherbeei_contig20491:328..789+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20491.1.1 ID=mRNA_P-wetherbeei_contig20491.1.1|Name=mRNA_P-wetherbeei_contig20491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig20491:328..789+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCCTCGAATGCGCTGATTACGCAGATATACATTGGGTATTTTAA CCGCGCGCCGGATCCGGCCGGGCTAAACTACTGGACGGGAAATCTTGCGG GCGGCATGTCCATCGCCGCCATCGCTGAAAGTTTTTCACGGCAGGGCGAA GCCGTTTCAAGCTATGCCTATCTGGCAAATCCGGTTGGCGGTTCCATCGA TGCGTTTTTGACCTCGGTTTACAATAATCTGTTCAATCACGCCCCGGATG CGGCCGGCCTCTCCTACTGGAAGGGTGAATTGGCGGCGGGCAAACCGGTT GGCGGGGTGATCATTGATATTATCAGTGGCGCCCAGGGCGGTGACAAAAC GGTGATTGATAACAAGGTTGCGGTTGCCCAGAGCTATGTGGTCCAGATTG GCGATACTACAGGCGAAATCTTCCGCATCGGGGATGCGCGCCGTGTGGTG GCGGATATAGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20491:328..789+

>mRNA_P-wetherbeei_contig20491.1.1 ID=mRNA_P-wetherbeei_contig20491.1.1|Name=mRNA_P-wetherbeei_contig20491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig20491:328..789+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCCTCGAATGCGCTGATTACGCAGATATACATTGGGTATTTTAA
CCGCGCGCCGGATCCGGCCGGGCTAAACTACTGGACGGGAAATCTTGCGG
GCGGCATGTCCATCGCCGCCATCGCTGAAAGTTTTTCACGGCAGGGCGAA
GCCGTTTCAAGCTATGCCTATCTGGCAAATCCGGTTGGCGGTTCCATCGA
TGCGTTTTTGACCTCGGTTTACAATAATCTGTTCAATCACGCCCCGGATG
CGGCCGGCCTCTCCTACTGGAAGGGTGAATTGGCGGCGGGCAAACCGGTT
GGCGGGGTGATCATTGATATTATCAGTGGCGCCCAGGGCGGTGACAAAAC
GGTGATTGATAACAAGGTTGCGGTTGCCCAGAGCTATGTGGTCCAGATTG
GCGATACTACAGGCGAAATCTTCCGCATCGGGGATGCGCGCCGTGTGGTG
GCGGATATAGAC
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