mRNA_P-wetherbeei_contig2049.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 1.080e-113 Identity = 272/544 (50.00%), Postives = 339/544 (62.32%), Query Frame = 1
Query: 1147 VGILLPLDYSGMVEPEALGRAAQQPPGFAPEEPLLREMDPMARKALRTQVDLSRTADDCLSVLVKFRDVLNSVTLPRPAAVDYNQALKDAQRERIRVNDRVFQGKVEPLLEELRSLVGPLVF-ETALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAGDLLTPSGTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMGGDFGMDNNGGGGVGXXXXXSGKRDKFKDRITRAKEDLDRFGERLRDHHTKIKDKKKAKNQVWKGPGWSVGLEKDRAMSWDGPLGGTGSNGLGAAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLEDDGEGGEPGIQLDGRLEVFLTLLDGSCKRRLSVTCPLVERCSPQCILLGAGSGEVNGTYDLAGFRHLSPLYMN-ANGVTISQAVLGERRGWVIGSPPNRIFYGQPTRLPYPPDVHWALMTGGEGTNPPPTLMTHFNKRVREKRIDIRELPTPR--WK--PGITFPSDLHDTTDVLSATPASAASAGAG*HGFG 2760
+GILLPLDYSGM AAQQ + PLLRE+D MAR AL+TQV++S + D+ L+VL KFR L + LP PA VDY+QALKDAQRE I +N R+F+G V+ LL+ LR L+ PLV + L VC DIIRASSRT+SGGD YAV+AA+LSRP GDLLTPSG+ S+PI I + GA GEVVITVEN F+LR++AM +G + SG++ K+R+ RA+E L E+ + K+ A+ +VW GPGWSV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +D+ +G I L GR+EV+L LLDGS KRRL V CP +ERC P+CILLGAG+ E NGTY+LAGFR+ +P Y N + VTI++ LG R GW+IG PPN + YGQP PP++HWALM GG G NPPPTLM H ++R +E+ +DIR++PTPR W +TFP D D V SA + HG G
Sbjct: 1128 LGILLPLDYSGM--------AAQQSDVGEGDAPLLRELDGMARNALKTQVEVSGSDDELLTVLAKFRHTLLGIPLPPPAPVDYDQALKDAQRESIEMNGRLFEGNVDELLKTLRGLIDPLVVGDETLTRAVCHDIIRASSRTSSGGDAYAVMAALLSRPAKGDLLTPSGSGSSPIGISIAGADGEVVITVENSFVLRRNAMQGLGMGEPQQQSSSS--------SGEKGTLKERMVRAREQLVEHVEQTAEQFRKMT----ARKEVWGGPGWSV----------------------------------DDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADAPAAADDEADG----ISLVGRVEVYLCLLDGSSKRRLRVNCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNDKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLMDIRQMPTPRARWAIPADVTFPDDT-DHNLVGSAMIVRPPTPSTPPHGGG 1612
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: D7FU20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU20_ECTSI) HSP 1 Score: 351 bits (901), Expect = 1.090e-106 Identity = 211/461 (45.77%), Postives = 269/461 (58.35%), Query Frame = 1
Query: 1321 CLSVLVKFRDVLNSVTLPRPAAVDYNQALKDAQRERIRVNDRVFQGKVEPLLEELRSLVGPLVF-ETALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAGDLLTPSGTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMG-GDFGMDNNGGGGVGXXXXXSGKRDKFKDRITRAKEDLDRFGERLRDHHTKIKDKKKAKNQVWKGPGWSVGLEKDRAMSWDGPLGGTGSNGLGAAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLEDDGEGGEPGIQLDGRLEVFLTLLDGSCKRRLSVTCPLVERCSPQCILLGAGSGEVNGTYDLAGFRHLSPLYMNA-NGVTISQAVLGERRGWVIGSPPNRIFYGQPTRLPYPPDVHWALMTGGEGTNPPPTLMTHFNKRVREKRIDIRELPTPR--WK--PGITFPSD 2682
C F L + LP P VDY+QA KDAQRE I++N R+F+G V+ LLE LR L+ PLV + L VC DI+RASSRT+SGGD YAV+AA+LSRP GDLLTPSG+ S+PI I + A GEVVITVENRF+LR++AM +G G+ ++ SG++ K+R+ RA+E L E+ + K+ A+ +VW GPGWSV D DG GG +G P XX + D E G GI L GR+EV+L LLDGS KRRL VTCP +ERC P+CILLGAG+ E NGTY+LAGFR+ +P Y N + VTI++ LG R GW+IG PPN + YGQP PP++HWALM GG G NPPPTLM H ++R +E+ +DIR++PTPR W +TFP D
Sbjct: 34 CSRCSPSFGSTLLGIMLPPPGPVDYDQAWKDAQRESIKMNGRLFEGNVDELLETLRGLIDPLVVGDETLTRAVCHDIMRASSRTSSGGDAYAVMAALLSRPAEGDLLTPSGSGSSPIGISVASADGEVVITVENRFVLRRNAMQGLGMGEPHQQSSAS---------SGEKGTLKERMVRAREQLVEHVEQTAEQFRKMT----ARKEVWGGPGWSV----DDVGGGDGGDGGVSCSGGTKTP---------------------------------RNSPNNGGAAXXADAPAPADDEAG--GISLVGRVEVYLCLLDGSSKRRLRVTCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLVDIRQMPTPRARWAIPADVTFPDD 442
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: A0A835YWH6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH6_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.910e-46 Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 2230 LDGRLEVFLTLLDGSCKRRLSVTCPLVERCSPQCILLGAGSGEVNGTYDLAGFRHLSPLYMN-ANGVTISQAVLGERRGWVIGSPPNRIFYGQPTRLPYPPDVHWALMTGGEGTNPPPTLMTHFNKRVREKRIDIRELPTPRWKPGITFPSDLHDTTDVLSATPASAASA 2736
L+GR+EV+L+L DG+CKRRL++T PLVE PQCI LGAGS NGT+DL G+RH +P Y N A+GVTI + L R GWV+ P++++Y +PPD+HW L++ G+G PPPTLMT + KRV+E+ +DIRELPTPRW P + S A+ + AASA
Sbjct: 205 LNGRMEVYLSLPDGACKRRLAITSPLVETAPPQCIALGAGSAAANGTFDLTGWRHGAPFYTNTASGVTIGRVELEGRAGWVMRKEPHKVYYCCTEASAHPPDLHWTLVSMGDGNEPPPTLMTSYQKRVKERPVDIRELPTPRWHPDASHFSPADAMLPDSDASLSRAASA 374
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: A0A7S1UIL6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIL6_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.560e-32 Identity = 155/506 (30.63%), Postives = 210/506 (41.50%), Query Frame = 1
Query: 1147 VGILLPLDYSGMVEPEALGRAAQQPPGFAPEEPLLREMDPMARKALRTQVDLSRTADDCLSVLVKFRDVLNSVTLPRPAAVDYNQALKDAQRERIRVNDRVFQGKVEPLLEELRSLVGPLVFET--ALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAG----DLLTPSGTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMGG-DFGMDNNGGGGVGXXXXXSGKRDKFKDRITRAKEDLDRFGERLRDHHTKIKDKKKAKNQVWKGPGWSVGLEKDRAMSWDGPLGGTGSNGLGAAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLEDDGEGGEPGIQLDGRLEVFLTLLDG-SCKRRLSVTCPLVERCSPQCILLGAGSGEVNGTYDLAGFRHLSPLYMNANGVTISQAV-----LGER---RGWVIGSPPNR--IFYGQPTRLPYPPDVHWALMTGG---EGTNPPPTLMTHFN 2601
V IL+PLDYSGM E G P PE L+ D AL+TQV L + L+V+ FRD L+ V LPRP AV QALKDA RER+RVN +G + L E +R + LV ++ LV V D++RASSRTA GGD Y ++ ++ R DLLTPS + PI + ++ G + I +RF+LR + MG + G+D++ KF RI R HH + K + + +D P E I LD ++EV L LLDG S +R + + CP VE QCI LGA NG+YDL GF H P Y+N +G T+ A LG+ R VIGS ++ I+ P LP P W ++ G + +P PTLM +F+
Sbjct: 793 VRILIPLDYSGM---EDAGGEGSVPDNAPPEVRLVSLWDVQTLNALKTQVQLCKERRALLTVMHLFRDFLHRVPLPRPLAVQAEQALKDAGRERVRVNGVPVEGNADVLRETVREALLSLVDDSNDVLVNSVVTDVMRASSRTAHGGDAYLILQSLFVRQADDGMPVDLLTPSPEQPPPIEVTVN-PNGFISIQSTDRFLLRDAQAIMMGELEDGVDDDD-----EADSEEKHNRKFLSRIKNVVTGR-------RQHH----------------------VHKYQYV-FDNP----------------------------------------------------------------------EKCIHLDTQVEVMLGLLDGGSWERTIRIACPQVENIPAQCIFLGAAHAPANGSYDLQGFAHGKPWYLNRHGYTLRYAESEKVSLGKLPCPRWEVIGSAHHQRPIYGAAPDSLP--PPHPWVVLLDGVLAQVLSPAPTLMHNFS 1187
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: A0A4D9DEA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA1_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.050e-26 Identity = 78/188 (41.49%), Postives = 112/188 (59.57%), Query Frame = 1
Query: 1216 QPPGFAPEEPLLREMDPMARKALRTQVDLSRTADDCLSVLVKFRDVLNSVTLPRPAAVDYNQALKDAQRERIRVNDRVFQGKVEPLLEELRSLVGPLVFETALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAGDLLTPS-GTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMGGDFGMD 1776
+PP E+ LL +D +R L+ +V + T D L++L + + LN + LP PAAVD QA KDAQRE + +N R F G L E+ LV PLV ++ T +CQDI+RASSRTASGGD+Y + ++L RP G+LLTP+ S PI+I + +G V I N ++L + + GG+ G +
Sbjct: 615 RPPRATSEKFLLSRIDGRSRLTLQARVHKAATPDMFLTLLHRSQSFLNCLHLPPPAAVDVPQAWKDAQRETVVLNGRSFSGDPSGLQSEMHRLVAPLVVDSETATLLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPATAASSIPISIHIGAEEGVVDIAAYNSYVLHWDMLEDGGGEAGKE 800
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: K8YUK8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUK8_NANGC) HSP 1 Score: 108 bits (270), Expect = 1.220e-21 Identity = 115/400 (28.75%), Postives = 157/400 (39.25%), Query Frame = 1
Query: 1378 PAAVDYNQALKDAQRERIRVNDRVFQGKVEPLLEELRSLVGPLVFETALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAGDLLTPS-GTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMGGDFGMDNNGGGGVGXXXXXSGKRDKFKDRITRAKEDLDRFGERLRDHHTKIKDKKKAKN-QVWKGPGWSVGLEKDR-AMSWDGPLGGTGSNGLGAAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLEDDGEG-GEPG--------------------------IQLDGRLEVFLTLLDGSCKRRLSVTCPLVERCSPQCILLGAGSGEVNGTYDLAGFRHLSPLYMNANGVTI------SQAVLGERRGWV 2469
PAAVD QA KDAQRE + +N R F G L E+ LV PLV ++ T +CQDI+RASSRTASGGD+Y + ++L RP G+LLTP+ S PI+I + +G V I N ++L + M +GGGG G + +K+A+N W P W ++ R S +GG + L A+ G S E D + GE G I L LEV L +L + R++ V C E+ ++LGAG G+VNGTY L GF+ +P YM ++ VL GWV
Sbjct: 2 PAAVDVLQAWKDAQRETVVLNGRSFSGDPSGLQSEMHRLVAPLVVDSETATLLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPAMAASSIPISIHIGAEEGVVDIAAYNSYVLH----------WDMLEDGGGGAGK------------------------------------EGRKEARNPSEWDLPMWQSYIDGGREGTSTRKKMGGFLTQMLQASGGNGFQRHVHPRRYFQDRGKGPGEGVGTREECTGTEDAGKEKEQTGVGSKKEGDQDRLGEKGXXXXXXXXXXXXXXXXXXXXXXAGERIVLQTLLEVRLDVLTRNSSRKMRVWCQETEKVPGSFLVLGAGEGKVNGTYFLHGFQGRAPWYMKEEXXXXXXXGERARVVLVRDEGWV 353
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Match: W7TIK0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIK0_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 4.230e-11 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1483 LRSLVGPLVFETALVTEVCQDIIRASSRTASGGDTYAVVAAVLSRPEAGDLLTPS-GTESAPIAIGLDGAKGEVVITVENRFILRKSAMANMGGDFGMD 1776
+ LV PLV ++ T +CQDI+RASSRTASGGD+Y + ++L RP G+LLTP+ S PI+I + +G V I N ++L + + GG G +
Sbjct: 1 MHRLVAPLVVDSETATLLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPAMAASSIPISIHIGAEEGVVDIAAYNSYVLHWDMLEDGGGGAGKE 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2049.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2049.2.1 >prot_P-wetherbeei_contig2049.2.1 ID=prot_P-wetherbeei_contig2049.2.1|Name=mRNA_P-wetherbeei_contig2049.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=872bp MYESTGSGGGPTYGSGSGNGGGSSGGGSSGSGGGGRFVSNPGLALEQQQYback to top mRNA from alignment at P-wetherbeei_contig2049:1802..6245- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2049.2.1 ID=mRNA_P-wetherbeei_contig2049.2.1|Name=mRNA_P-wetherbeei_contig2049.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4444bp|location=Sequence derived from alignment at P-wetherbeei_contig2049:1802..6245- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2049:1802..6245- >mRNA_P-wetherbeei_contig2049.2.1 ID=mRNA_P-wetherbeei_contig2049.2.1|Name=mRNA_P-wetherbeei_contig2049.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2616bp|location=Sequence derived from alignment at P-wetherbeei_contig2049:1802..6245- (Phaeothamnion wetherbeei SAG_119_79)back to top |