mRNA_P-wetherbeei_contig20427.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A3C0TX45_9PROT (Chorismate mutase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TX45_9PROT) HSP 1 Score: 394 bits (1012), Expect = 3.670e-136 Identity = 199/269 (73.98%), Postives = 222/269 (82.53%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAH-----------KSIRIVARLPFLRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQLPS 774
FL+RAEIV IA+ KA QP+APVFAMRPGREA ILRRL+ARH+G FP AAIGRMWRELI+AS MQGPFE AIYGS DPAG++DVARWHFGS+ P+ LYNSA QVLQ+V EGKGVVGVLPLPGGGDPG DWWP+LAH KSIRIVARLPFLR GQ DAV VAP+DREETGDD +FLLAFCRNEMSRAAVRRLL GI CRPLD ++DKRLMLFD GYI+ NDIRL R+VASEEKLLER+V+AGGYA P++L +
Sbjct: 28 FLKRAEIVARIAEVKAAGQPEAPVFAMRPGREAMILRRLMARHAGGFPFAAIGRMWRELISASSSMQGPFEAAIYGSGDPAGFIDVARWHFGSI-PATLYNSATQVLQKVAEGKGVVGVLPLPGGGDPGGDWWPSLAHGQMTENGGEGGKSIRIVARLPFLRLPGQKISDAVVVAPVDREETGDDTTFLLAFCRNEMSRAAVRRLLDSCGIPCRPLDISQEDKRLMLFDAPGYISSNDIRLARSVASEEKLLERLVIAGGYANPIELSA 295
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A352KDT2_9PROT (Chorismate mutase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KDT2_9PROT) HSP 1 Score: 243 bits (620), Expect = 9.960e-77 Identity = 132/265 (49.81%), Postives = 168/265 (63.40%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDA-PVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAHKSI------RIVARLPFLRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQLPS 774
F+ RA+IV+ IA KA + A PVFAMRPGREA ILRRL RHSG P IGR+WRELI A C MQGPF+VAIYG++D GY DVAR HFGS P+ + ++ VLQ+V GVVGVLP PG GD G DWW LAH S +IVARLPF R E + DAVAVA +DREETG+D ++L+ +SR + + + +GI + +D + ++L D +GYI+ +D RL A + + I V GGYA+P LP
Sbjct: 26 FMERADIVREIADVKARQTGTAGPVFAMRPGREASILRRLAERHSGALPRQVIGRIWRELIAAKCRMQGPFQVAIYGASDIVGYWDVARSHFGSDTPTVMCDTVRLVLQKVANETGVVGVLPTPGCGDSGTDWWQGLAHGSAGDRAGPQIVARLPFFRSERKPERDAVAVAKVDREETGEDRTYLVLHGPANVSRTSCLKTIEAAGISAQLVDWQSDRESVLLLDAEGYISGDDPRLSAARQAAGGAIMHISVIGGYAVPYHLPG 290
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A2D6SZX8_9PROT (Chorismate mutase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6SZX8_9PROT) HSP 1 Score: 177 bits (449), Expect = 5.520e-51 Identity = 107/262 (40.84%), Postives = 150/262 (57.25%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAH---KSIRIVARLPFLRGEGQVSCD--AVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPL---DTDK-QDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALP 759
+ R+E+ I AK D V AMRPGREA++LRRL+ RHSG P + +WREL++A +QGP EVA+ GY D+AR HFG+ L+ S VL+ V EG+G+V VLPLP DP A WW LA + RI+A+LPF+ D A+ VAP+DR++TG D S L+ +SRA + LA +G+E L D D+ Q + L L + ++A ++ R+ + S E ++RIV GGYA+P
Sbjct: 26 LIERSELAAEILAAKP--PTDDQVSAMRPGREAEVLRRLLGRHSGVLPAIVVADLWRELMSAFVRLQGPLEVAVCAPEKSVGYWDLARAHFGTATAMTLHRSPGVVLRAVTEGEGIVAVLPLPQEDDP-APWWQQLAADVPNAPRIIAKLPFVENRASRFEDLGALVVAPLDRQQTGQDKSLLVLATETPISRAKLVEQLASAGLEGGALAVTDRDRDQPEALYLIEIDDFVAKDNARIADFLESSEGSIDRIVSLGGYAVP 284
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A537RNL1_9PROT (Chorismate mutase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RNL1_9PROT) HSP 1 Score: 174 bits (442), Expect = 5.840e-50 Identity = 101/262 (38.55%), Postives = 152/262 (58.02%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAH---KSIRIVARLPF-LRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQLPS 774
+ RA+IV +A +K + + P F +P REA+I+RRLV RH G FPVA + RMWRE++ A+ +Q PF VA++ AD G+ D+AR H+GS P + Y++ QV++ V ++GVL LP G+P WWP L + ++VARLPF RG + DA+A+ EE+G D + L A C +S A + LA +G+EC + D + K L + +G++ +D RL +ER++ GGYA+PL P+
Sbjct: 26 LIDRAQIVSLVAASK--KDGNQPAF--QPAREAEIIRRLVGRHRGAFPVATLVRMWREMLAATVRLQSPFSVAVFAPADRPGFWDLARDHYGSNTPMSAYDTVGQVIRAVAGRTALLGVLALPKAGEPDL-WWPHLLSIDDDAPQVVARLPFGARGNARADADALAIGYGGPEESGLDRTLLGAECPAAISEARISDALATAGLECTSVMCDGRGKAAYLIEVEGFVPISDKRLDAFRVELGAAIERLLPLGGYAVPLAPPA 282
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A2S2CWQ6_9PROT (Chorismate mutase n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CWQ6_9PROT) HSP 1 Score: 172 bits (436), Expect = 5.020e-49 Identity = 106/264 (40.15%), Postives = 141/264 (53.41%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAHKSIR---IVARLPFL-RGEGQ-VSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIE----CRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQ 765
+RRA +V+ I AK + AP +RP REA ILRRL+ARH+G FP AI RMWRE+ITA +QGPF VA+Y D G+ DVAR HFGS VP N+ A L+ V EG VG++P P D WW L R IVARLPF RG G+ DA+A+A + E TGDD + L ++SR ++ +L G+ C D + L + ++ D R+ ++ R+ GGYA+PLQ
Sbjct: 26 LMRRAAVVERIGLAKGADGSGAPPVFLRPAREATILRRLMARHAGSFPAQAIVRMWREMITALTRLQGPFAVAVYAPEDRRGFWDVARDHFGSFVPMTAVNTPAAALRAVSEGTATVGIVPYPAEDD-SDPWWRFLVSADARRPQIVARLPFGGRGNGRGEDRDALAIAMVPHEPTGDDRTLLSIEILGDLSRGRLKDMLEACGLPPVSFCTWHSKDAAGPSIHLVEIADFVDPADPRMTALRERSGEIPVRVNTVGGYAVPLQ 288
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: UPI00115EABD7 (chorismate mutase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115EABD7) HSP 1 Score: 171 bits (432), Expect = 1.690e-48 Identity = 101/262 (38.55%), Postives = 157/262 (59.92%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPG-GGDPGADWWPALAHKSI---RIVARLPFL--RGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLD--TDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPL 762
+ R ++V+ I +AK DA V+ +RPGREA+ILRRLVARH G FP A + RMWRE+++A +QGPF VA+Y AG++D+AR H+GS Y +A QV++ V +G+ VGV+P+P G+P WW + + RI+ RLPF R + +A+ +A + ++ TG+D S+L ++SRA ++ L SG+E R +D+ L + +GY+A +D R++R V + +L +V+ GGY +PL
Sbjct: 25 LMHRCDVVRRIGEAKG----DAAVY-LRPGREAEILRRLVARHQGPFPKAVLVRMWREMMSALVSLQGPFGVAVYMPERGAGFIDLARGHYGSHSALTSYRTAGQVVRAVADGEATVGVVPVPTLEGEP---WWQGMMGQGADVPRIIGRLPFTGPRADSAEGLEALVIARLPQDATGNDRSWLAFETLPDISRARLKTTLLASGLEPREFSGGMHSEDRWTHLVEFEGYVAPDDRRILRMVEKADPVLHAVVL-GGYPVPL 277
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: UPI001424A2CB (chorismate mutase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001424A2CB) HSP 1 Score: 171 bits (433), Expect = 2.410e-48 Identity = 103/261 (39.46%), Postives = 146/261 (55.94%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAHK---SIRIVARLPF--LRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLDT--DKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPL 762
+RR E+ + IA AK MRPGREA++LRRLV RH G FP I R+WRE+I+ +QGPF A + + +AR HFGS+ P Y S VL+ V +GK +G+LPLP D G WWP LA S +I+ARLPF L G + +AV V+ + EE+GDD +L+ +SR A++ LL+D+G E R D D+ L L + +G++A +D R+ VA +++ V G +A+PL
Sbjct: 26 LMRRTELARQIALAKGSN-----AVIMRPGREARVLRRLVGRHQGPFPKPVISRIWREIISVFTRLQGPFAAAAFAPEGGSDLSLLARDHFGSLTPITSYGSEMGVLRAVSDGKANIGILPLPES-DRGTPWWPKLARSGKASPKIIARLPFAALDGGRRHGPEAVVVSLAEPEESGDDQGYLIVELDEAVSRGALKTLLSDAGFEVRNTQAWVDAPDRPLHLVEVEGFLASDDARVAALVAETDQVSHAWAV-GSFAVPL 279
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: A0A843RK32_9PROT (Chorismate mutase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RK32_9PROT) HSP 1 Score: 170 bits (431), Expect = 2.960e-48 Identity = 104/261 (39.85%), Postives = 149/261 (57.09%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAHK---SIRIVARLPF--LRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIECRPLDT--DKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPL 762
+RR E+V+ I +AK VF MRPGREA++LRRLVARH G FP + R+WRE+I+ +QGPF A Y A +AR HFGS+ P + S VL+ V GK +GVLPLP D G WWP LA + +++ARLPF L G S AV V+ + EE+G+DH +L+ +SR A++ LL+++G E + D D+ L L + +G++A +D R I A+ E +++ G +A+PL
Sbjct: 26 LMRRTELVRQIGRAKG----QGAVF-MRPGREARVLRRLVARHQGPFPKPVVTRIWREIISVFTRLQGPFAAAAYAPEGGADLSGLARDHFGSLTPITRFGSEMGVLRAVSSGKANIGVLPLPEA-DRGTPWWPKLARHGKATPKVIARLPFAALDGGRGDSPHAVVVSLAEPEESGEDHGYLIVELDEAVSRGALKTLLSEAGFEVCDIQAWVDSPDRTLHLVEVEGFLAGDDPR-IAALLEEADAVKQAWSVGSFAVPL 279
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: B6IYP9_RHOCS (Chorismate mutase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IYP9_RHOCS) HSP 1 Score: 169 bits (429), Expect = 4.880e-48 Identity = 105/261 (40.23%), Postives = 145/261 (55.56%), Query Frame = 1
Query: 4 LRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGADWWPALAH---KSIRIVARLPFLRGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGI---ECRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQL 768
+RR +V+ I AV+ P P A+RP REA+ILR L+ RH G FP AA+ RMWRE+I+A +QGPF VA+Y D G+ D+AR H+GS P NS+ VL+ V EG VGVLP P DP WW L KS RI+ARLPFL G+ +A+A+A + EETGDD + L R +MSR ++ L +G+ + R + L + + ++ +D RL + L R++ G YA P+ L
Sbjct: 27 MRRTALVEQIG---AVKPPGRP--ALRPAREAEILRNLMDRHQGAFPPAALSRMWREMISALTRLQGPFAVAVYAPDDQRGFWDLARDHYGSATPMQAANSSLAVLRLVAEGSATVGVLPWPEDDDPDP-WWRYLFTADAKSPRIIARLPFLARAGREEVEAMAIAALPLEETGDDRTLLGIELREDMSRGRLKDSLEAAGLPPLQLRTFHLPGGAGSVHLTEVEAFVGPDDPRLAALYQRLGEALVRLLPIGTYATPIGL 281
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Match: UPI001A9734FD (chorismate mutase n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A9734FD) HSP 1 Score: 168 bits (426), Expect = 1.890e-47 Identity = 106/271 (39.11%), Postives = 145/271 (53.51%), Query Frame = 1
Query: 1 FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAAIGRMWRELITASCGMQGPFEVAIYGSADPAGYLDVARWHFGSVVPSALYNSAAQVLQRVGEGKGVVGVLPLPGGGDPGAD-WWPALAHKSI---RIVARLPFL-----RGEGQVSCDAVAVAPIDREETGDDHSFLLAFCRNEMSRAAVRRLLADSGIE----CRPLDTDKQDKRLMLFDTQGYIADNDIRLIRAVASEEKLLERIVVAGGYALPLQLPS 774
+RRA +V+ I AK +RPGREA ILRRL+ARH+G FP + R+WRE+I+A +QGPF VA+Y D G+ DVAR HFGS+VP + NS L+ V EG V ++P P D AD WW + RIVARLPF RGE + DA+A+A + E TGDD S L ++SR ++ L SG+ C D+ + L + ++ D RL +A ++ R+ V GGYA+PL P+
Sbjct: 29 LMRRASVVERIGVAKGPGPAPGQAVFLRPGREAVILRRLMARHAGSFPAQVVVRIWREMISAFTRLQGPFAVAVYAPEDRRGFWDVARDHFGSLVPMSAVNSPVAALRAVAEGTATVAIVPYPAEDD--ADPWWRFVVSSDASTPRIVARLPFCGRGNARGEDR---DALALAMVPHEPTGDDRSMLGIELGADLSRGRLKDFLEASGLPPTSFCTWHARDRSGPSIHLVEIADFVDPADPRLADFLARMGEIPARVNVLGGYAVPLSFPN 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20427.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20427.1.1 >prot_P-wetherbeei_contig20427.1.1 ID=prot_P-wetherbeei_contig20427.1.1|Name=mRNA_P-wetherbeei_contig20427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp FLRRAEIVQSIAKAKAVEQPDAPVFAMRPGREAKILRRLVARHSGKFPVAback to top mRNA from alignment at P-wetherbeei_contig20427:3..779+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20427.1.1 ID=mRNA_P-wetherbeei_contig20427.1.1|Name=mRNA_P-wetherbeei_contig20427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig20427:3..779+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20427:3..779+ >mRNA_P-wetherbeei_contig20427.1.1 ID=mRNA_P-wetherbeei_contig20427.1.1|Name=mRNA_P-wetherbeei_contig20427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig20427:3..779+ (Phaeothamnion wetherbeei SAG_119_79)back to top |