mRNA_P-wetherbeei_contig20416.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20416.1.1
Unique NamemRNA_P-wetherbeei_contig20416.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6L5FN14_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FN14_9HYPH)

HSP 1 Score: 303 bits (776), Expect = 5.730e-99
Identity = 151/257 (58.75%), Postives = 198/257 (77.04%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVG 771
            AG +I+GP PQDG+KILL+HA+P+ EK+   KTIR+++++  WLGAYD IAQ+M +WH  G  T+DDLK+K+ V GS + +HL+YQWAM+AK  L  KFKVI+GY +G + NLAMERGEI GWA +WE+I   +  W+  K V++ V +TLER+ QLP VPTLLEL    +++VVEF+ +GTPIAR+MA+GP V  DRVDALR AF A M D EFL EA KR+LAI  R+AA+ +A+V KI++ASP+LVARVK AVG
Sbjct:  128 AGSHIYGPAPQDGTKILLAHAIPITEKMLGGKTIRFKTREFHWLGAYDAIAQIMTVWHTAGVKTIDDLKTKEFVVGSFSNTHLTYQWAMLAKTVLGTKFKVITGYRSGNDTNLAMERGEIQGWAASWENINGTRPQWIRDKTVNMLVQYTLERIPQLPDVPTLLELTPPGKKDVVEFITSGTPIARSMAVGPGVPKDRVDALRKAFNALMRDKEFLAEAEKRQLAINPRSAAQVQAMVDKIITASPELVARVKTAVG 384          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A127EWV8_9HYPH (Efflux RND transporter protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EWV8_9HYPH)

HSP 1 Score: 290 bits (743), Expect = 1.240e-94
Identity = 150/259 (57.92%), Postives = 191/259 (73.75%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
            AG YIF  GPQDG+KIL+SH LPL+EKLE P  +RYES K QWLG YD I QVMA+WH   A +L D K+KDLV GS   +HLSYQWAM+AK  L A +KVI+GY +G +L+LAMERGEI+GW VAWE++   K DW+A KKV +P+ F   RM  LP VPTL ELA   ++++V+F+ +GTP +RA+A+GP+V ADRV  LR AF   M D  FL +AAK +L I  R A + +A+V KIVSA+P+LV RV++A+GQE
Sbjct:   82 AGNYIFNTGPQDGTKILMSHPLPLIEKLE-PNGVRYESAKFQWLGTYDSINQVMALWHTAPALSLADPKAKDLVLGSFNKTHLSYQWAMMAKNVLGASYKVITGYPSGNHLDLAMERGEISGWVVAWENLTGTKPDWLAQKKVVLPMQFAPARMSDLPDVPTLGELAPADKKDIVDFVVSGTPFSRALAVGPQVPADRVAVLRRAFDDLMRDEAFLADAAKLKLGIEPRNAEQVQAMVSKIVSATPELVTRVRQAIGQE 339          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A7C4IS30_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4IS30_9BACT)

HSP 1 Score: 278 bits (712), Expect = 6.700e-90
Identity = 145/259 (55.98%), Postives = 185/259 (71.43%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
            AG YI+G GPQDG+KILLSH++PL EKL  P  +R+ES K QWLG +D IA  MA+WH T   +++ LKSK LV GS A SHL+YQ+  + K  L   +++ +GY +G +LNLA+ERGE+ GWA +WE++   +  WVA KKV + V FTLER +Q+P VPTLLEL    ++++VEF+  GTP  RAMA+GP V  DRVDALR AF A M DP FL +AAKRRL I  R A    AL  K+ +ASPDLVARVKKA+GQ+
Sbjct:   84 AGNYIYGTGPQDGTKILLSHSIPLAEKLT-PTGVRFESAKFQWLGTFDAIAHTMAMWHTTQVNSIEALKSKPLVIGSFAKSHLTYQFPALMKHVLGLNYQLTTGYRSGSDLNLALERGEVHGWAASWENLIGTRPQWVAEKKVFLLVSFTLERKKQIPDVPTLLELTPPDKKDIVEFVTAGTPFGRAMAVGPGVPKDRVDALRKAFDAVMKDPAFLADAAKRRLDIDPRPAEYPHALANKLATASPDLVARVKKAIGQD 341          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7GQC3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQC3_9HYPH)

HSP 1 Score: 262 bits (669), Expect = 2.260e-83
Identity = 134/259 (51.74%), Postives = 176/259 (67.95%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
            AG ++FGPGPQDG+K+LLSHA+ L E L+    +R++S K  W+G YD IA  MA WH +   TL DLK  ++V GS A +HL+YQW  + K  L   FK+++GY TG   NLAMERGEI GWA +WE++   +  W+  KK+++   F LER  Q+P VPTLLELA   +++VVEFL+ GTP  R +A GP V  +RV ALR AF AT+ DP F+    KR++ I +R    T +LV KIV ASPDL+ARVKK+VGQE
Sbjct:   85 AGNHLFGPGPQDGTKVLLSHAIILAEVLDPKAGVRFQSAKFNWIGTYDAIAHTMAFWHESPVKTLADLKKSNVVVGSFAKAHLTYQWPAMMKDVLGLNFKIMTGYPTGNTNNLAMERGEIHGWAPSWENLIGTRPHWIKEKKITLLAQFMLERKHQIPDVPTLLELAPPEKKDVVEFLSAGTPFGRGVAAGPGVPPERVAALRAAFEATVKDPAFIAATEKRKVDIDWRDHQHTMSLVKKIVGASPDLIARVKKSVGQE 343          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7FC19_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC19_9PROT)

HSP 1 Score: 247 bits (630), Expect = 1.740e-77
Identity = 122/258 (47.29%), Postives = 182/258 (70.54%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQ 774
            A  +++    QDG+++LLSHA+ L EKL+ P+ ++++S+K  WLG++D I+QVM +W      TL++ +  + + G+   +HL+YQWA +A   L AKFK+++GY++G   NLAME+GE  GW  +  ++   K  W+  KK+++ V +TLERM ++P+VPTL+EL K  +++V EF+  GTPIAR++A+GP V ADRV ALR AFA T+ DP FL +A KR+L+I+ R   +TEALV KI SASP+L+ RVK A GQ
Sbjct:   85 AANFLYAAAAQDGTQLLLSHAIALSEKLQ-PQGVKFKSEKFHWLGSFDAISQVMVLWGTAPVKTLEEARKTEAIIGAFGKNHLTYQWASMANTLLGAKFKIVTGYSSGAKNNLAMEQGETHGWTASVANLVSTKPHWLKEKKINMLVTYTLERMSEIPEVPTLMELVKPEDKDVAEFMIAGTPIARSIAVGPDVPADRVAALREAFAKTVADPNFLADAKKRKLSIQPRQWQQTEALVKKIASASPELIQRVKLATGQ 341          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7FLM8_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FLM8_9PROT)

HSP 1 Score: 171 bits (434), Expect = 4.050e-48
Identity = 102/256 (39.84%), Postives = 152/256 (59.38%), Query Frame = 1
Query:   10 YIFGPGPQDGSKI-LLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFT-LERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
            Y++    QDGS I L+S+A P+ + L+    ++Y++ K  ++G    +  V+ +WH  G  TLDD+K+K++VFG+      +Y   ++ K  L  K +VI+GY    +++LA+E+GE+ G A AW S   G   W+  KKV +PV    LE+   LP  P LL+LAKG E R V+E LA+   + R   + P V  DRV A+R AF A+MTDP FL+EA KR+L +   T    +A+V K V+A P + AR KK +
Sbjct:   87 YLYSVAAQDGSVIGLISNAAPVYQVLKGG--VKYDASKFNYIGRAASMQYVIMVWHDQGVKTLDDMKTKEVVFGATGKGQSNYMVPILLKNLLGLKARVITGYPGTKDISLALEKGEVGGRAGAWSSWQTGHAHWLRDKKV-VPVAQAGLEKASDLPNAPLLLDLAKGEEERAVLELLASDAAVGRGFMMPPGVPKDRVQAMRRAFDASMTDPAFLEEAKKRKLLVEPMTGERLQAIVDKTVAAPPKVAARAKKVL 339          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A1H4PPD2_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4PPD2_9HYPH)

HSP 1 Score: 151 bits (381), Expect = 2.920e-40
Identity = 88/259 (33.98%), Postives = 150/259 (57.92%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKI-LLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
            A  ++    P+DG+ + ++   +P ++ +   K ++++ ++  W+G       V+  WH TG   ++D+ +K+LV G+   +  SY +     A L  KF++++GY  G ++NLAME+GE+ G  + +W S   G   W+A +K++I V   LER   LP VP + ELAK  E R V++F+++   ++R++   P V A+R+ ALR  F   M DPEFL EAAK ++ I   TAA+T+A    ++ A P ++AR K  +
Sbjct:   78 AANWVAKVAPRDGTVLHMIFQNMPTLQAI-GAKEVQFDVRQFGWIGNTTNTPNVINSWHSTGINKIEDVYNKELVVGAPGAASSSYVYPAAMNALLGTKFRIVTGYPGGNDVNLAMEKGEVGGRGSNSWASWKSGHPHWLAERKINILVQIGLERAPDLPNVPLIWELAKNDEDRAVLKFISSDIGMSRSVITTPGVPAERLAALRATFDKMMKDPEFLAEAAKTKMDISPSTAAQTQAAAESMLDAPPQVIARAKALI 335          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7GZI4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZI4_9HYPH)

HSP 1 Score: 147 bits (371), Expect = 9.530e-39
Identity = 93/260 (35.77%), Postives = 142/260 (54.62%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTI-----RYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVK 759
            A  Y+     QDG+ +   HA+  M+ +   + +      Y+++K  W+G   +   V+  WH TG  T+ D+ +++LV G+   +  S  +       +  KFK++SGY  G  +NLAMERGE+ G  + +W S    K DW+  KK+ I V   L+R  +LP VPT++ELAK  E + V+ FL+   P++RA    P V ADRV+ALR AF ATM DP+F+ EAAK  + +   T  E +     I +    ++AR K
Sbjct:   85 AANYMATVAAQDGTAL---HAI--MQSMSTHQALGGAGAEYDTRKFFWIGNTTDTPNVINSWHTTGIRTIQDVMTRELVVGAPGQATNSVYYPKALNDLVGTKFKIVSGYPGGNPVNLAMERGEVGGRGSNSWASWKATKPDWLREKKIFILVQIALKRNPELPDVPTMIELAKTDEDKAVMRFLSADIPVSRAYVTTPGVPADRVNALRRAFDATMKDPQFIAEAAKLNMDMSPSTGEEAQKFAESIANTPSQILARAK 339          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6L5FKR1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FKR1_9HYPH)

HSP 1 Score: 147 bits (371), Expect = 1.140e-38
Identity = 89/248 (35.89%), Postives = 134/248 (54.03%), Query Frame = 1
Query:   28 PQDGSKILL-SHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKA 765
            P+DG+ I + +   PL EK      +R+++ +L W+G  D +  V+ +WH +   T  D +             L   +  V+   L  KFK+I GY       LAMERGE+ G A +W ++ V   DW   KKVS+ V F + + R+LP+VPT++E+A+  E R ++  + N + I  A    P V ADRV ALR AF ATM DPEF+ E  + +L     T  E + L+ ++ S  PD+VA+V+ A
Sbjct:  102 PKDGTIIGIGAPTAPLDEKF-GTANVRFKTAELNWIGRIDSLINVVFMWHISPVKTFADAQKMQSTLSGTGVGSLVSIFPTVSNNVLGTKFKLIMGYKGSRAAQLAMERGEVEGHATSWTAVKVAHPDWRPTKKVSMLVQFAMNKHRELPEVPTIIEVARNDEQRAILRAVMNASEIGTAFFTSPGVPADRVAALRRAFDATMKDPEFVAETERLKLGFNPITGEELQKLIAEVSSLPPDMVAKVRAA 348          
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A7C9K8R4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9K8R4_9PROT)

HSP 1 Score: 146 bits (368), Expect = 4.680e-38
Identity = 93/259 (35.91%), Postives = 146/259 (56.37%), Query Frame = 1
Query:    1 AGGYIFGPGPQDGSKIL-LSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGP-EREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
            AG Y+    P+DG+ I  +S  +P  + +  P+ +++++ K  W+G   EI  V+ +WH TG  +L D++ K++V G+   +  S  +       L  KFK+I G+  G  +NLAMERGEI+G  + +W S+      ++A KKV +PV   L+R + LP VP L EL +   E +V+  +++   I R +   P V ADRV ALR AF  T+    FLDEAAK +L I   +  E + +V ++V+A  D+   V+ AV
Sbjct:   86 AGQYMSMQAPRDGAVIATISQGMPFSQ-ISTPQQVKFDTSKFLWIGNPIEINNVLELWHTTGVKSLKDMQQKEIVLGASGAASTSGLYPRAMNNILGTKFKIIVGFKGGSEMNLAMERGEISGRGSNSWASLKGITPQYLAGKKVIVPVQMGLKREKDLPDVPMLWELGRNEAETQVLRMMSSLPAIGRPLFTPPGVPADRVKALRKAFDETVKSKAFLDEAAKAKLEINPVSGEEIQKIVEEMVNAPADVKKLVQAAV 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FN14_9HYPH5.730e-9958.75Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A127EWV8_9HYPH1.240e-9457.92Efflux RND transporter protein n=1 Tax=Rhodoplanes... [more]
A0A7C4IS30_9BACT6.700e-9055.98Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A6N7GQC3_9HYPH2.260e-8351.74Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A6N7FC19_9PROT1.740e-7747.29Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A6N7FLM8_9PROT4.050e-4839.84Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A1H4PPD2_9HYPH2.920e-4033.98Tripartite-type tricarboxylate transporter, recept... [more]
A0A6N7GZI4_9HYPH9.530e-3935.77Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A6L5FKR1_9HYPH1.140e-3835.89Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A7C9K8R4_9PROT4.680e-3835.91Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20416contigP-wetherbeei_contig20416:6..788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1144310.PMI07_005447
PFAMsTctC
Model size783
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.5e-26
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1N8DG@1224|Proteobacteria,2VFU9@28211|Alphaproteobacteria,4BNCX@82115|Rhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size783
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186199.13562-CDS-P-wetherbeei_contig20416:5..7881683186199.13562-CDS-P-wetherbeei_contig20416:5..788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20416 6..788 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20416.1.1prot_P-wetherbeei_contig20416.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20416 6..788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20416.1.1

>prot_P-wetherbeei_contig20416.1.1 ID=prot_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEI
AQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFK
VISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFT
LERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVD
ALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVA
RVKKAVGQER*
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mRNA from alignment at P-wetherbeei_contig20416:6..788+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20416.1.1 ID=mRNA_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20416:6..788+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCGGCTATATCTTCGGTCCCGGCCCGCAGGATGGCTCCAAAATCCT CCTCAGTCACGCCCTGCCGCTGATGGAAAAACTCGAGGACCCAAAGACGA TCCGGTACGAGTCGAAAAAGCTGCAATGGCTCGGCGCCTACGACGAGATC GCGCAGGTGATGGCGATCTGGCACGGTACCGGTGCCACCACCTTGGATGA CCTGAAGTCGAAGGACCTCGTGTTCGGCTCCATGGCGACGAGCCACCTGA GCTACCAGTGGGCGATGGTCGCCAAGGCGTCGCTCGCCGCCAAATTCAAA GTCATCTCGGGCTACACGACTGGCGGCAACCTGAACCTTGCGATGGAGCG CGGCGAGATCGCCGGCTGGGCGGTCGCGTGGGAGAGCATCGCTGTCGGCA AGGAAGACTGGGTCGCCGCCAAGAAGGTCTCGATTCCAGTCGTGTTCACT CTCGAGCGGATGCGCCAACTCCCCCAGGTGCCGACGCTGCTCGAGCTGGC CAAAGGCCCCGAACGCGAGGTCGTGGAGTTCCTCGCCAACGGCACGCCGA TCGCCCGCGCCATGGCGCTCGGCCCGAAGGTCGCCGCAGATCGGGTCGAC GCATTGCGAAATGCATTTGCAGCGACGATGACGGATCCTGAATTCCTCGA CGAAGCCGCCAAGCGCCGCCTCGCCATCCGCTTTCGCACGGCGGCGGAAA CTGAGGCGCTCGTCGGCAAGATCGTCTCGGCCTCGCCCGACCTCGTCGCA CGCGTCAAGAAAGCCGTTGGCCAGGAACGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20416:6..788+

>mRNA_P-wetherbeei_contig20416.1.1 ID=mRNA_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20416:6..788+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCGGCTATATCTTCGGTCCCGGCCCGCAGGATGGCTCCAAAATCCT
CCTCAGTCACGCCCTGCCGCTGATGGAAAAACTCGAGGACCCAAAGACGA
TCCGGTACGAGTCGAAAAAGCTGCAATGGCTCGGCGCCTACGACGAGATC
GCGCAGGTGATGGCGATCTGGCACGGTACCGGTGCCACCACCTTGGATGA
CCTGAAGTCGAAGGACCTCGTGTTCGGCTCCATGGCGACGAGCCACCTGA
GCTACCAGTGGGCGATGGTCGCCAAGGCGTCGCTCGCCGCCAAATTCAAA
GTCATCTCGGGCTACACGACTGGCGGCAACCTGAACCTTGCGATGGAGCG
CGGCGAGATCGCCGGCTGGGCGGTCGCGTGGGAGAGCATCGCTGTCGGCA
AGGAAGACTGGGTCGCCGCCAAGAAGGTCTCGATTCCAGTCGTGTTCACT
CTCGAGCGGATGCGCCAACTCCCCCAGGTGCCGACGCTGCTCGAGCTGGC
CAAAGGCCCCGAACGCGAGGTCGTGGAGTTCCTCGCCAACGGCACGCCGA
TCGCCCGCGCCATGGCGCTCGGCCCGAAGGTCGCCGCAGATCGGGTCGAC
GCATTGCGAAATGCATTTGCAGCGACGATGACGGATCCTGAATTCCTCGA
CGAAGCCGCCAAGCGCCGCCTCGCCATCCGCTTTCGCACGGCGGCGGAAA
CTGAGGCGCTCGTCGGCAAGATCGTCTCGGCCTCGCCCGACCTCGTCGCA
CGCGTCAAGAAAGCCGTTGGCCAGGAACGGTGA
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