mRNA_P-wetherbeei_contig20416.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6L5FN14_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FN14_9HYPH) HSP 1 Score: 303 bits (776), Expect = 5.730e-99 Identity = 151/257 (58.75%), Postives = 198/257 (77.04%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVG 771
AG +I+GP PQDG+KILL+HA+P+ EK+ KTIR+++++ WLGAYD IAQ+M +WH G T+DDLK+K+ V GS + +HL+YQWAM+AK L KFKVI+GY +G + NLAMERGEI GWA +WE+I + W+ K V++ V +TLER+ QLP VPTLLEL +++VVEF+ +GTPIAR+MA+GP V DRVDALR AF A M D EFL EA KR+LAI R+AA+ +A+V KI++ASP+LVARVK AVG
Sbjct: 128 AGSHIYGPAPQDGTKILLAHAIPITEKMLGGKTIRFKTREFHWLGAYDAIAQIMTVWHTAGVKTIDDLKTKEFVVGSFSNTHLTYQWAMLAKTVLGTKFKVITGYRSGNDTNLAMERGEIQGWAASWENINGTRPQWIRDKTVNMLVQYTLERIPQLPDVPTLLELTPPGKKDVVEFITSGTPIARSMAVGPGVPKDRVDALRKAFNALMRDKEFLAEAEKRQLAINPRSAAQVQAMVDKIITASPELVARVKTAVG 384
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A127EWV8_9HYPH (Efflux RND transporter protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EWV8_9HYPH) HSP 1 Score: 290 bits (743), Expect = 1.240e-94 Identity = 150/259 (57.92%), Postives = 191/259 (73.75%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
AG YIF GPQDG+KIL+SH LPL+EKLE P +RYES K QWLG YD I QVMA+WH A +L D K+KDLV GS +HLSYQWAM+AK L A +KVI+GY +G +L+LAMERGEI+GW VAWE++ K DW+A KKV +P+ F RM LP VPTL ELA ++++V+F+ +GTP +RA+A+GP+V ADRV LR AF M D FL +AAK +L I R A + +A+V KIVSA+P+LV RV++A+GQE
Sbjct: 82 AGNYIFNTGPQDGTKILMSHPLPLIEKLE-PNGVRYESAKFQWLGTYDSINQVMALWHTAPALSLADPKAKDLVLGSFNKTHLSYQWAMMAKNVLGASYKVITGYPSGNHLDLAMERGEISGWVVAWENLTGTKPDWLAQKKVVLPMQFAPARMSDLPDVPTLGELAPADKKDIVDFVVSGTPFSRALAVGPQVPADRVAVLRRAFDDLMRDEAFLADAAKLKLGIEPRNAEQVQAMVSKIVSATPELVTRVRQAIGQE 339
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A7C4IS30_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4IS30_9BACT) HSP 1 Score: 278 bits (712), Expect = 6.700e-90 Identity = 145/259 (55.98%), Postives = 185/259 (71.43%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
AG YI+G GPQDG+KILLSH++PL EKL P +R+ES K QWLG +D IA MA+WH T +++ LKSK LV GS A SHL+YQ+ + K L +++ +GY +G +LNLA+ERGE+ GWA +WE++ + WVA KKV + V FTLER +Q+P VPTLLEL ++++VEF+ GTP RAMA+GP V DRVDALR AF A M DP FL +AAKRRL I R A AL K+ +ASPDLVARVKKA+GQ+
Sbjct: 84 AGNYIYGTGPQDGTKILLSHSIPLAEKLT-PTGVRFESAKFQWLGTFDAIAHTMAMWHTTQVNSIEALKSKPLVIGSFAKSHLTYQFPALMKHVLGLNYQLTTGYRSGSDLNLALERGEVHGWAASWENLIGTRPQWVAEKKVFLLVSFTLERKKQIPDVPTLLELTPPDKKDIVEFVTAGTPFGRAMAVGPGVPKDRVDALRKAFDAVMKDPAFLADAAKRRLDIDPRPAEYPHALANKLATASPDLVARVKKAIGQD 341
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7GQC3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQC3_9HYPH) HSP 1 Score: 262 bits (669), Expect = 2.260e-83 Identity = 134/259 (51.74%), Postives = 176/259 (67.95%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQE 777
AG ++FGPGPQDG+K+LLSHA+ L E L+ +R++S K W+G YD IA MA WH + TL DLK ++V GS A +HL+YQW + K L FK+++GY TG NLAMERGEI GWA +WE++ + W+ KK+++ F LER Q+P VPTLLELA +++VVEFL+ GTP R +A GP V +RV ALR AF AT+ DP F+ KR++ I +R T +LV KIV ASPDL+ARVKK+VGQE
Sbjct: 85 AGNHLFGPGPQDGTKVLLSHAIILAEVLDPKAGVRFQSAKFNWIGTYDAIAHTMAFWHESPVKTLADLKKSNVVVGSFAKAHLTYQWPAMMKDVLGLNFKIMTGYPTGNTNNLAMERGEIHGWAPSWENLIGTRPHWIKEKKITLLAQFMLERKHQIPDVPTLLELAPPEKKDVVEFLSAGTPFGRGVAAGPGVPPERVAALRAAFEATVKDPAFIAATEKRKVDIDWRDHQHTMSLVKKIVGASPDLIARVKKSVGQE 343
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7FC19_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC19_9PROT) HSP 1 Score: 247 bits (630), Expect = 1.740e-77 Identity = 122/258 (47.29%), Postives = 182/258 (70.54%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPEREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAVGQ 774
A +++ QDG+++LLSHA+ L EKL+ P+ ++++S+K WLG++D I+QVM +W TL++ + + + G+ +HL+YQWA +A L AKFK+++GY++G NLAME+GE GW + ++ K W+ KK+++ V +TLERM ++P+VPTL+EL K +++V EF+ GTPIAR++A+GP V ADRV ALR AFA T+ DP FL +A KR+L+I+ R +TEALV KI SASP+L+ RVK A GQ
Sbjct: 85 AANFLYAAAAQDGTQLLLSHAIALSEKLQ-PQGVKFKSEKFHWLGSFDAISQVMVLWGTAPVKTLEEARKTEAIIGAFGKNHLTYQWASMANTLLGAKFKIVTGYSSGAKNNLAMEQGETHGWTASVANLVSTKPHWLKEKKINMLVTYTLERMSEIPEVPTLMELVKPEDKDVAEFMIAGTPIARSIAVGPDVPADRVAALREAFAKTVADPNFLADAKKRKLSIQPRQWQQTEALVKKIASASPELIQRVKLATGQ 341
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7FLM8_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FLM8_9PROT) HSP 1 Score: 171 bits (434), Expect = 4.050e-48 Identity = 102/256 (39.84%), Postives = 152/256 (59.38%), Query Frame = 1
Query: 10 YIFGPGPQDGSKI-LLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFT-LERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
Y++ QDGS I L+S+A P+ + L+ ++Y++ K ++G + V+ +WH G TLDD+K+K++VFG+ +Y ++ K L K +VI+GY +++LA+E+GE+ G A AW S G W+ KKV +PV LE+ LP P LL+LAKG E R V+E LA+ + R + P V DRV A+R AF A+MTDP FL+EA KR+L + T +A+V K V+A P + AR KK +
Sbjct: 87 YLYSVAAQDGSVIGLISNAAPVYQVLKGG--VKYDASKFNYIGRAASMQYVIMVWHDQGVKTLDDMKTKEVVFGATGKGQSNYMVPILLKNLLGLKARVITGYPGTKDISLALEKGEVGGRAGAWSSWQTGHAHWLRDKKV-VPVAQAGLEKASDLPNAPLLLDLAKGEEERAVLELLASDAAVGRGFMMPPGVPKDRVQAMRRAFDASMTDPAFLEEAKKRKLLVEPMTGERLQAIVDKTVAAPPKVAARAKKVL 339
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A1H4PPD2_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4PPD2_9HYPH) HSP 1 Score: 151 bits (381), Expect = 2.920e-40 Identity = 88/259 (33.98%), Postives = 150/259 (57.92%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKI-LLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
A ++ P+DG+ + ++ +P ++ + K ++++ ++ W+G V+ WH TG ++D+ +K+LV G+ + SY + A L KF++++GY G ++NLAME+GE+ G + +W S G W+A +K++I V LER LP VP + ELAK E R V++F+++ ++R++ P V A+R+ ALR F M DPEFL EAAK ++ I TAA+T+A ++ A P ++AR K +
Sbjct: 78 AANWVAKVAPRDGTVLHMIFQNMPTLQAI-GAKEVQFDVRQFGWIGNTTNTPNVINSWHSTGINKIEDVYNKELVVGAPGAASSSYVYPAAMNALLGTKFRIVTGYPGGNDVNLAMEKGEVGGRGSNSWASWKSGHPHWLAERKINILVQIGLERAPDLPNVPLIWELAKNDEDRAVLKFISSDIGMSRSVITTPGVPAERLAALRATFDKMMKDPEFLAEAAKTKMDISPSTAAQTQAAAESMLDAPPQVIARAKALI 335
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6N7GZI4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZI4_9HYPH) HSP 1 Score: 147 bits (371), Expect = 9.530e-39 Identity = 93/260 (35.77%), Postives = 142/260 (54.62%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTI-----RYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVK 759
A Y+ QDG+ + HA+ M+ + + + Y+++K W+G + V+ WH TG T+ D+ +++LV G+ + S + + KFK++SGY G +NLAMERGE+ G + +W S K DW+ KK+ I V L+R +LP VPT++ELAK E + V+ FL+ P++RA P V ADRV+ALR AF ATM DP+F+ EAAK + + T E + I + ++AR K
Sbjct: 85 AANYMATVAAQDGTAL---HAI--MQSMSTHQALGGAGAEYDTRKFFWIGNTTDTPNVINSWHTTGIRTIQDVMTRELVVGAPGQATNSVYYPKALNDLVGTKFKIVSGYPGGNPVNLAMERGEVGGRGSNSWASWKATKPDWLREKKIFILVQIALKRNPELPDVPTMIELAKTDEDKAVMRFLSADIPVSRAYVTTPGVPADRVNALRRAFDATMKDPQFIAEAAKLNMDMSPSTGEEAQKFAESIANTPSQILARAK 339
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A6L5FKR1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FKR1_9HYPH) HSP 1 Score: 147 bits (371), Expect = 1.140e-38 Identity = 89/248 (35.89%), Postives = 134/248 (54.03%), Query Frame = 1
Query: 28 PQDGSKILL-SHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAGWAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGPE-REVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKA 765
P+DG+ I + + PL EK +R+++ +L W+G D + V+ +WH + T D + L + V+ L KFK+I GY LAMERGE+ G A +W ++ V DW KKVS+ V F + + R+LP+VPT++E+A+ E R ++ + N + I A P V ADRV ALR AF ATM DPEF+ E + +L T E + L+ ++ S PD+VA+V+ A
Sbjct: 102 PKDGTIIGIGAPTAPLDEKF-GTANVRFKTAELNWIGRIDSLINVVFMWHISPVKTFADAQKMQSTLSGTGVGSLVSIFPTVSNNVLGTKFKLIMGYKGSRAAQLAMERGEVEGHATSWTAVKVAHPDWRPTKKVSMLVQFAMNKHRELPEVPTIIEVARNDEQRAILRAVMNASEIGTAFFTSPGVPADRVAALRRAFDATMKDPEFVAETERLKLGFNPITGEELQKLIAEVSSLPPDMVAKVRAA 348
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Match: A0A7C9K8R4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9K8R4_9PROT) HSP 1 Score: 146 bits (368), Expect = 4.680e-38 Identity = 93/259 (35.91%), Postives = 146/259 (56.37%), Query Frame = 1
Query: 1 AGGYIFGPGPQDGSKIL-LSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIAQVMAIWHGTGATTLDDLKSKDLVFGSMATSHLSYQWAMVAKASLAAKFKVISGYTTGGNLNLAMERGEIAG-WAVAWESIAVGKEDWVAAKKVSIPVVFTLERMRQLPQVPTLLELAKGP-EREVVEFLANGTPIARAMALGPKVAADRVDALRNAFAATMTDPEFLDEAAKRRLAIRFRTAAETEALVGKIVSASPDLVARVKKAV 768
AG Y+ P+DG+ I +S +P + + P+ +++++ K W+G EI V+ +WH TG +L D++ K++V G+ + S + L KFK+I G+ G +NLAMERGEI+G + +W S+ ++A KKV +PV L+R + LP VP L EL + E +V+ +++ I R + P V ADRV ALR AF T+ FLDEAAK +L I + E + +V ++V+A D+ V+ AV
Sbjct: 86 AGQYMSMQAPRDGAVIATISQGMPFSQ-ISTPQQVKFDTSKFLWIGNPIEINNVLELWHTTGVKSLKDMQQKEIVLGASGAASTSGLYPRAMNNILGTKFKIIVGFKGGSEMNLAMERGEISGRGSNSWASLKGITPQYLAGKKVIVPVQMGLKREKDLPDVPMLWELGRNEAETQVLRMMSSLPAIGRPLFTPPGVPADRVKALRKAFDETVKSKAFLDEAAKAKLEINPVSGEEIQKIVEEMVNAPADVKKLVQAAV 343 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20416.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20416.1.1 >prot_P-wetherbeei_contig20416.1.1 ID=prot_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp AGGYIFGPGPQDGSKILLSHALPLMEKLEDPKTIRYESKKLQWLGAYDEIback to top mRNA from alignment at P-wetherbeei_contig20416:6..788+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20416.1.1 ID=mRNA_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20416:6..788+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20416:6..788+ >mRNA_P-wetherbeei_contig20416.1.1 ID=mRNA_P-wetherbeei_contig20416.1.1|Name=mRNA_P-wetherbeei_contig20416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20416:6..788+ (Phaeothamnion wetherbeei SAG_119_79)back to top |