mRNA_P-wetherbeei_contig20407.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Match: A0A521RA17_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A521RA17_9BACT) HSP 1 Score: 167 bits (422), Expect = 1.330e-51 Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 1 VLTTYRFDHPETDASKTLDMRAYIYASLFGPVYVLANGFPVLALLMVLISVAIFVAAFIGFGFVDWFLGSQLITIIALIGVPIFALAAQGIAAIELVRRGYLRAGWREGY 330
+L TYRFDHPETDASKTLD +AY+YASLFGP+YVL NGFP+LALLM+ IS IF+ AF+GFGF+DW L S+L+TI AL GVP+ AL QGIAAIELVR GYLR+GWREGY
Sbjct: 1 MLGTYRFDHPETDASKTLDAKAYVYASLFGPLYVLVNGFPILALLMIPISAMIFILAFVGFGFLDWVLSSELVTIFALFGVPVAALVVQGIAAIELVRVGYLRSGWREGY 110
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Match: A0A1F2ZXE0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZXE0_9PROT) HSP 1 Score: 157 bits (398), Expect = 6.070e-48 Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 1
Query: 1 VLTTYRFDHPETDASKTLDMRAYIYASLFGPVYVLANGFPVLALLMVLISVAIFVAAFIGFGFVDWFLGSQLITIIALIGVPIFALAAQGIAAIELVRRGYLRAGWREGY 330
+ +TYRFDHPETDASKTLD+ AY +ASLFGP YVL GFP+LALLMV +S IFV AF GFG VDW LGS+++T+ AL P+ ALAAQGIAAIELVR+GYLRAGWREGY
Sbjct: 1 MFSTYRFDHPETDASKTLDVWAYFWASLFGPFYVLFAGFPLLALLMVPVSAMIFVLAFAGFGLVDWVLGSEVVTVFALFATPVAALAAQGIAAIELVRKGYLRAGWREGY 110
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Match: A0A6A7M2L1_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M2L1_9PROT) HSP 1 Score: 82.0 bits (201), Expect = 2.810e-18 Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 76 ASLFGPVYVLANGFPVLALLMVLISVAIFVAAFIGFGFVDWFLGSQLITIIALIGVPIFALAAQGIAAIELVRRGYLRAGWREGY 330
ASLFGP+YVL NGF L+LLM L+S I F G F+ F S I +AL VPI AL QG+A +E+VR GY+R GWREGY
Sbjct: 2 ASLFGPLYVLFNGFVALSLLMFLVSAVIGGVTFGGLVFILLFFDSSAIRSLALSVVPIVALVVQGVAGVEIVRAGYMRRGWREGY 86
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Match: A0A521LM41_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LM41_9HYPH) HSP 1 Score: 69.3 bits (168), Expect = 5.370e-13 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 1 VLTTYRFDHPETDASKTLDMRAYIYASLFGPVYVLANG--FPVLALLMVLISVAIFVAAFIGFGFVDWFLGSQLITIIALIGVPIFALAAQGIAAIELVRRGYLRAGWREGY 330
+L TYR D P++D S +D +Y++A+L GP YV++ G F +LA LM I++ + + AF+G + ++ + A++ A G+A ++LV GY+RAGW+ GY
Sbjct: 1 MLPTYRLDRPDSDDSIIIDGWSYVWAALAGPFYVMSKGKGFYLLAALMAAITLMLAIGAFLGLLIAVQLFDASVLGLAAMLISIAGAFLLNGVAGVQLVHWGYVRAGWKMGY 112
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Match: A0A537N5J1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N5J1_9PROT) HSP 1 Score: 61.2 bits (147), Expect = 7.310e-10 Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 4 LTTYRFDHPETDASKTLDMRAYIYASLFGPVYVLANGFPVLALLMVLISVAIFV---AAFIGFGFVDWFLGSQLITIIALIGVPIFALAAQGIAAIELVRRGYLRAGWREGY 330
+ T+ +H +T ++ L Y+ L GP+Y+L GFP LAL+M+ ISV +F + W +++ T++ + V + A G A++++R GY+R G+REGY
Sbjct: 1 MATFVLEHRQTGDTQILGGWGYVCGGLLGPIYLLIKGFPGLALVMIPISVLVFTIGGTVMVLVALASW--PTEITTVVGIFLVVVM-FAVHGYLAVQMLRAGYIRRGYREGY 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20407.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20407.1.1 >prot_P-wetherbeei_contig20407.1.1 ID=prot_P-wetherbeei_contig20407.1.1|Name=mRNA_P-wetherbeei_contig20407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp VLTTYRFDHPETDASKTLDMRAYIYASLFGPVYVLANGFPVLALLMVLISback to top mRNA from alignment at P-wetherbeei_contig20407:261..593+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20407.1.1 ID=mRNA_P-wetherbeei_contig20407.1.1|Name=mRNA_P-wetherbeei_contig20407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig20407:261..593+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20407:261..593+ >mRNA_P-wetherbeei_contig20407.1.1 ID=mRNA_P-wetherbeei_contig20407.1.1|Name=mRNA_P-wetherbeei_contig20407.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig20407:261..593+ (Phaeothamnion wetherbeei SAG_119_79)back to top |