mRNA_P-wetherbeei_contig20380.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20380.1.1
Unique NamemRNA_P-wetherbeei_contig20380.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A7C4TQ57_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TQ57_9HYPH)

HSP 1 Score: 522 bits (1344), Expect = 2.260e-176
Identity = 260/409 (63.57%), Postives = 326/409 (79.71%), Query Frame = 1
Query:    1 AGLQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            AG+  R L++ +++ GA+ +A  LVW+    A  V+  A+AE++RLR+ LL+A+ IIK+EPQV+V WE G  L V+ H+L++V G+P + R LLRFG+WLD+A+A  LKSALD LFT+G+ F+LLLKTAAG HLEA GRAAG+ A+LRLRDVA+YK DLV++LDQH QL+ ++RS RALLD++P+PVWL+  DG I+WAN AYI AVEA  LAEV+ERQ ELLE  QR MVA AL+KG  F++RL LIINGERRAHDVIV   + SV A A+DVAALE A+ E+ RQ T YDRTLDR+ T  A+F+R++RLTF+NEA+RKLWR+D  WLD +P+ GEILDRLH LSRLPP  DYR W+A VL  ++ G  YDDWWQLPDGR LHV+AEQRHDGGVTYL+DDATERLALE
Sbjct:   45 AGIGARQLLISAVLAGAAAIAGILVWSIVGAARRVMRRAQAETARLRRKLLIADAIIKSEPQVLVSWEPGRGLEVINHSLTTVPGLPENQRELLRFGAWLDKAAAAELKSALDTLFTSGRGFNLLLKTAAGGHLEAYGRAAGSRAILRLRDVAAYKRDLVKVLDQHRQLSRDIRSSRALLDALPLPVWLKGSDGRIEWANQAYIKAVEAADLAEVRERQHELLESRQRAMVARALAKGESFAKRLHLIINGERRAHDVIVLPVDSSVVAAAIDVAALETAQGELSRQITAYDRTLDRVTTAVAIFNRERRLTFFNEAYRKLWRLDPAWLDKRPADGEILDRLHELSRLPPMADYRRWKADVLATYTKGTIYDDWWQLPDGRMLHVMAEQRHDGGVTYLYDDATERLALE 453          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A2W4KRE7_9PROT (Histidine kinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KRE7_9PROT)

HSP 1 Score: 458 bits (1179), Expect = 1.360e-151
Identity = 231/409 (56.48%), Postives = 293/409 (71.64%), Query Frame = 1
Query:    1 AGLQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            AGL LRHL  ++L  GA+++A ALV+   RRA   +  A +E++ LR+ L  AE I+K EPQV+V WE G+ L+VV HTL+SVAG+P + + LLRFG+WLD  SAE+LK  LD LF+ G+PF+LLLKT AG HLEADGRAAG  AVLRLRDVA YK DL+++LDQH QL  ++R+ RALL+++PMPVWLRS DG I+W N AY+AAVEA   AEV+ERQIELLE  QR  +   L K     +R+PLII GER+ HD+++   E +++A A+DV  LE A+ E+ RQ   YDRTLDR+ T  A+F  DQRL+F+N A+++LW  D +WL TKP+  EILDRL   SRLP   DYR W+  +L  + S     DWW LPDGR L VVAE R DGG+TYLFDD TER  LE
Sbjct:   44 AGLSLRHLFFVALAAGAAVLAIALVYYLLRRARQAVRRAESEAAALRRHLATAEAIVKAEPQVLVFWEQGQPLKVVVHTLTSVAGLPENHQDLLRFGTWLDTESAEALKVGLDALFSDGRPFNLLLKTTAGGHLEADGRAAGPRAVLRLRDVAGYKRDLIKILDQHRQLARDIRASRALLNALPMPVWLRSPDGRIEWVNKAYVAAVEAADEAEVRERQIELLESRQRAALEPQLKKRELAIKRMPLIIGGERKPHDIVIVPLEDTIAAAAIDVTDLESAQDELQRQIAAYDRTLDRVSTAVAIFGPDQRLSFFNAAYQQLWNFDAEWLATKPTHSEILDRLRETSRLPAIVDYRGWKTKLLTFYQSEPELQDWWDLPDGRMLRVVAEHRPDGGITYLFDDVTERYQLE 452          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A2W4TWW5_9PROT (Histidine kinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TWW5_9PROT)

HSP 1 Score: 446 bits (1147), Expect = 8.480e-147
Identity = 220/408 (53.92%), Postives = 288/408 (70.59%), Query Frame = 1
Query:    4 GLQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            GL +R L+  +   G + +   LVW   RRA   IS A  +++ LR+ L  AE IIK EPQV+V WE  + +RVV HTLSSV G+P D + L RFGSWL+  SAE+LK+ LD LF  G+PF+LLLKT AG HLEADGRA+G  AVLRLRDVA YK DL++++DQH QL  ++R+ RALL+++PMPVW+R  DG I+W N AY+AAVEA   AEV+E+QIELLE  QR  +   L+K    + R+PLII GER+ HD+++   E + +A A+DV A+E A+ E+DRQ   Y RTLDR+ T  A+F  D+RL F+N A+++LW +D+DWL+T+P+   ILDRL   SRLP   +YR+W+A +L C+ S    +DWW LPDGR LHVVAEQR DGG+  LFDD TER  LE
Sbjct:   45 GLTVRPLLFAAFAAGTAGLGVTLVWYVLRRARRAISRAETDAAALRRHLATAEAIIKAEPQVLVFWEQDQPVRVVAHTLSSVPGLPDDPKELTRFGSWLETESAEALKAGLDGLFADGRPFNLLLKTNAGGHLEADGRASGARAVLRLRDVAGYKRDLIKIIDQHRQLARDIRASRALLNALPMPVWIRGPDGRIEWVNKAYVAAVEAADEAEVREKQIELLESRQRAALERKLNKREPLTTRMPLIIGGERKPHDIVIVPLEDTTAAAAIDVTAVETAQGELDRQIAAYLRTLDRVATAVAIFGADRRLNFFNAAYQRLWNLDRDWLETRPTDSGILDRLRETSRLPATVNYRAWKAKLLACYQSTTELEDWWHLPDGRMLHVVAEQRPDGGIIQLFDDVTERFDLE 452          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A7C2LU99_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LU99_9HYPH)

HSP 1 Score: 436 bits (1122), Expect = 4.440e-143
Identity = 224/404 (55.45%), Postives = 284/404 (70.30%), Query Frame = 1
Query:   16 RHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            R ++LLSLVLGA  +A  L+    RR+     ++  E + LR+ LL AE IIK EPQV+V WE G+ +RV+THTL+ V G+P D   LLRFG WLD  SA+ LK  LD LF  G+PF+ LLKTAAG H+EADGRAAG  A+LRLR VA  K DL R+LDQH QL  +  +GR LLD++PMP W R  DG + W N AY+ AVEA + AEV++RQIELLE  QR  VA AL++G  +  R+ LI  G R+AHDV+V   E +    A+DVAALE A+ E+ R    Y+RTLDR+ TG A+F  DQRL F+NEA+R LW++D DWL TKP+ GE+LDRL  LSRLP   +YR W+A +L  + +G  Y+DWW L DGR +HVV+ QR DGG+TYL+DDATER+ALE
Sbjct:   47 RAVLLLSLVLGAGALAAILLLRAVRRSAAPGEASAQEVAELRRNLLTAEAIIKAEPQVLVFWEQGQGVRVMTHTLTGVPGLPRDGPELLRFGRWLDLDSAQELKRGLDALFADGRPFTSLLKTAAGGHVEADGRAAGGRAILRLRAVAGRKRDLARILDQHRQLVRDTLAGRTLLDALPMPAWFRGADGRLLWVNEAYVKAVEAGSEAEVRQRQIELLEMRQREAVAAALARGVPYRERVHLISGGARKAHDVVVIPLEGASVGAAIDVAALETAQGELVRHVAAYERTLDRVATGVAIFGPDQRLAFFNEAYRNLWQLDADWLATKPTDGELLDRLRELSRLPEVENYRDWKAKLLAGYKTGTEYEDWWHLLDGRTIHVVSAQRPDGGLTYLYDDATERIALE 450          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: UPI00198B77AA (PAS-domain containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI00198B77AA)

HSP 1 Score: 418 bits (1074), Expect = 1.180e-139
Identity = 205/394 (52.03%), Postives = 276/394 (70.05%), Query Frame = 1
Query:   46 GASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            G  ++  AL+W T  RA      A  E S L++ L  A++II++EPQ+++ WE  + +RVV HTLS + G+P      LRFG WL+  SA  LK ALD LFT+GQ F++++ T AG HLEA+GR AG  AVLR RDVA ++ ++ R+L QH +L  E+R+ RALLD++P+PVWLR  DG + W N AY+ AVEA++  EVQERQIELLEQ QRR  A  L++G  +  R+PLI+ GER+ HDV V   E + +A A+D  ALEKA+ E DRQ+  YDRTLDR+ T  A+F+  Q+L F+NEA+RKLW++D+DWL T+P+ G +LDRL  L R+P   +Y  W++++LD +  G A DD W LPDGR L V+AE+R DGGVTY+F D TERLALE
Sbjct:   58 GILLLGGALIWLTVVRAKREERRAVTEVSGLKRSLAAADSIIRSEPQILLFWEQNQPIRVVAHTLSGIPGLPDSPERFLRFGQWLEPNSAAMLKPALDALFTSGQAFNVIVHTMAGGHLEAEGRTAGGRAVLRFRDVAGHREEVARILAQHQRLAREVRASRALLDALPIPVWLRGKDGRLTWVNNAYVRAVEARSRGEVQERQIELLEQRQRRAAARVLARGESYRARIPLIVGGERKHHDVTVMPFEEATAAAAIDAVALEKAQGEPDRQAVPYDRTLDRVATAVAIFNAQQQLVFFNEAYRKLWQLDEDWLKTRPTEGAVLDRLRELGRVPQVVNYSEWKSNILDSYGEGSAEDDTWLLPDGRTLQVLAEKRSDGGVTYMFVDETERLALE 451          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A2D7F771_9HYPH (Histidine kinase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7F771_9HYPH)

HSP 1 Score: 427 bits (1097), Expect = 2.850e-139
Identity = 216/409 (52.81%), Postives = 287/409 (70.17%), Query Frame = 1
Query:    1 AGLQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            AG++   L+L + + G S  AF LV     R   V+ +A+ E++RLRQ LL AE I K EPQV++ W+  + LR+VTHTL +V G+P D   LL+FG+WLD  SA  LK +LD LF  G+PF+L LK  +GAHLEADGRA GT AVLRLRDVA  K DL R+LDQH +L+G+LR+ RALL+++P+  WL    G I+WAN AY++AVEA+   EV ++QIELLE  QR+ +  AL +G  F+ R+P+I  G R AHDV V S + S +A A+D  A+E  + E+DRQ   +DRTLDR+ T  A+F +DQ L+FYN+A++ LW++D  WL+  PS   ILDRL  LS LP   DYRSW++ +L  + S  A++DWWQLPDGR LHVVA QR DGGVTY+++D +ERLALE
Sbjct:   44 AGVETSTLLLFAGLAGLSFGAFGLVLFMGFRTRRVVRAAQDETTRLRQSLLTAEAIFKAEPQVLLFWDQVDGLRIVTHTLDAVRGLPQDQGGLLKFGAWLDDVSAADLKESLDHLFAEGRPFTLYLKLRSGAHLEADGRATGTRAVLRLRDVAGTKRDLARILDQHRRLSGDLRATRALLNALPISAWLADETGRIKWANDAYVSAVEAEDGTEVYDKQIELLESRQRQRIERALERGQIFAERMPVIAGGTRSAHDVYVVSADKSAAAAAIDAGAIESVQGELDRQIEAFDRTLDRVATPVAIFGQDQTLSFYNKAYQDLWKLDPSWLNLCPSDAAILDRLKELSLLPAMADYRSWKSKLLAVYKSTNAFEDWWQLPDGRMLHVVANQRPDGGVTYVYEDISERLALE 452          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A6N6SYD4_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SYD4_9HYPH)

HSP 1 Score: 422 bits (1086), Expect = 1.160e-137
Identity = 215/394 (54.57%), Postives = 271/394 (68.78%), Query Frame = 1
Query:   46 GASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            GA + +   V   +RR  +   +A  E + LR+ LL  E IIK E QV+V WE G+ +R++ HTLS + G+P     LLRFG WLD A+A+ LK  LD LF  G+PF+LLLKT AG H+EADGRA G  A+LRLRDVA  K DL ++LDQH QL  +  +GR LL+S+PMP W R  DG I+W N AY+ AVEA+  AEV+ERQIELLE  QR  V  +L KG+    RL LI  G R+AHDV+V     +    A+DVAALE A+ ++ R    Y+RTLDR+ TG A+F  DQRLTF+NEA+RKLW++D DWL TKPS GE+LDRL  LSRLP   +YR W+A +L  + +G  YDDWW L DGR +HVV+ QR DGG+TYL+DDATER ALE
Sbjct:   60 GAVLASVIAVRALSRRGSSSQRAAVDEVAELRKNLLTVEAIIKAEAQVLVFWEQGQSVRIMVHTLSGIPGLPERHEELLRFGQWLDLAAAQDLKRGLDALFAEGRPFTLLLKTRAGGHVEADGRATGGRAILRLRDVAGRKRDLAKILDQHRQLVRDTVAGRTLLNSLPMPAWFRQDDGRIEWVNEAYVKAVEARDEAEVRERQIELLETRQREAVQASLVKGAAHRERLHLISGGVRKAHDVVVLPLPGASVGAAIDVAALETAQGDLVRHVAAYERTLDRVATGVAIFGPDQRLTFFNEAYRKLWQLDADWLATKPSDGELLDRLRELSRLPEVGNYRDWKAKILAGYKTGTEYDDWWHLLDGRTIHVVSAQRPDGGLTYLYDDATERFALE 453          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A7Y5CYF4_HYPSQ (Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CYF4_HYPSQ)

HSP 1 Score: 421 bits (1083), Expect = 3.610e-137
Identity = 207/407 (50.86%), Postives = 289/407 (71.01%), Query Frame = 1
Query:    7 LQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            L LRH+ L+++V GA  VA  +VW  T  A      A+AES +LR+ L  A+ II+ EPQV++ WE G+ +R+V HTLS V G+P ++  +LRFG WL+   A+SLKSALD LF  G+ F+++LKT AG ++EA+GRAAG  AVLRL+D+A YK +L  + +QHA L+ ++RS RALL+++PMPVWLR+ DG + W N AYI AVEA++ AEV ERQIELLE  QR+ VA ++++G  +  R+ L+  GERR HD++V   +  ++  A+DV A+E  + E++RQ   YDRTL R+ T  A+F+R+Q+L F+N+A+R LW++D +WL T+PS   +LDRL    +LP   +YR W+A VL C+ +G   +D W L DGR LHV+AEQR DGGVTYLF D TERL+LE
Sbjct:   46 LDLRHVTLIAVVAGAGFVAGLIVWHMTSSARREARYAKAESLQLRRNLAAADAIIRAEPQVLIFWEQGQAVRIVAHTLSGVPGLPDNNTEILRFGHWLEAKGAQSLKSALDQLFAQGRAFNIILKTLAGGNVEAEGRAAGGRAVLRLKDIAGYKLELATIHNQHAALSRDIRSSRALLNTLPMPVWLRATDGRLIWVNTAYITAVEAQSEAEVLERQIELLESRQRKSVAKSMAQGESYKARVHLVTGGERRPHDIVVLPVDGVMAGAAIDVTAIETVQGELERQIAAYDRTLHRVETAVAIFNREQQLVFFNDAYRNLWQLDAEWLRTQPSDSAVLDRLREQGKLPSVVNYRDWKARVLACYQTGTELEDGWHLSDGRVLHVMAEQRPDGGVTYLFADETERLSLE 452          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A6I0EN80_HYPSQ (Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EN80_HYPSQ)

HSP 1 Score: 418 bits (1074), Expect = 9.310e-136
Identity = 206/399 (51.63%), Postives = 282/399 (70.68%), Query Frame = 1
Query:   31 LSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            + LV G ++   AL+  T  RA      A AE++ L++ L  A++II++EPQ+++ WE  + LRVV HTL  + G+P      LRFG WL+ +SA +LK A+D LFT+GQPF++++++ AGAH+EA+GR AG  AVLR RDVA ++ ++ R+L QH +L  E+R+ RALLD++P+PVWLR  DG + W N AY+ AVEA++ AEVQERQIELLEQ QRR  A  L++G  +  RLPLI+ GERR HDV V   E + +A AVDV A+EK + E++RQ+  YDRTLDR+ T  A+F+  Q+L F+NEA+RKLW++D+DWL T+P+ G +LDRL  L RLP   +Y  WR+ +L  +      DD W LPDGR L V+AE+R DGG+TYLF D TERLALE
Sbjct:   53 IGLVGGIALFIAALIALTVVRAKREERQAVAEAAGLKRSLAAADSIIRSEPQILLFWEQNQPLRVVAHTLKDIPGLPETPEKFLRFGQWLEPSSAATLKPAIDALFTSGQPFNIIVRSIAGAHVEAEGRTAGGRAVLRFRDVAGHRDEVARVLAQHQRLAREVRASRALLDALPIPVWLRGKDGRLTWVNNAYVRAVEARSRAEVQERQIELLEQRQRRAAARVLARGESYRGRLPLIVGGERRPHDVTVLPFEDATAAAAVDVLAIEKTQGELERQAVPYDRTLDRVATAVAIFNAQQQLVFFNEAYRKLWQLDEDWLKTRPTEGAVLDRLRELGRLPQVINYSEWRSKILASYGDAAVEDDTWLLPDGRTLQVLAEKRSDGGITYLFVDDTERLALE 451          
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Match: A0A6I3KP58_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KP58_9HYPH)

HSP 1 Score: 410 bits (1053), Expect = 1.260e-132
Identity = 204/397 (51.39%), Postives = 281/397 (70.78%), Query Frame = 1
Query:   37 LVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGLLLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWLDQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLRDVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWANAAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIINGERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRTGAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPPNPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFDDATERLALE 1227
            L+ G ++ A AL+  T  RA      A  E++ L++ L  A++II++EPQV++ WE  + LRVVTHTL  + G+P      LRFG WL+ ASA +LK A+D LF+ GQPF+L+++TA+G H+EA+GR AG  AVLR RDVA ++ ++ R+L QH +L  E+R+ RALLD++P+PVWLR+ DG + W N+AY+ AVEA++ AEVQERQIELLEQ QRR  A  L++G  +  R+PLI+ GERR HDV V   E + +A AVDV A+EK++ E++RQ+  YDRTLDR+ T  A+F+  Q+L F+NEA+RKLW++D  WL T+P+ G +LDRL  L RLP   +Y  W+A++L  +      DD W LPDGR L V  E+R DGG+TYLF D TERLA+E
Sbjct:   55 LLAGLALFAAALIALTVVRAKREERRAVTEATGLKRSLAAADSIIRSEPQVLLFWEQDQPLRVVTHTLRDIPGLPETPDKFLRFGHWLEPASAANLKPAIDTLFSRGQPFNLIVRTASGGHVEAEGRTAGGRAVLRFRDVAGHRDEVARILAQHQRLAREVRASRALLDALPIPVWLRAKDGRLTWVNSAYVRAVEARSRAEVQERQIELLEQRQRRAAARVLARGESYRTRVPLIVGGERRPHDVTVIPFEDATAAAAVDVLAIEKSQGELERQAVPYDRTLDRVATAVAIFNAQQQLVFFNEAYRKLWQLDDAWLKTRPTEGAVLDRLRELGRLPQVVNYSEWKANILAGYGEDPIEDDTWLLPDGRTLQVRPEKRSDGGITYLFVDDTERLAME 451          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20380.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TQ57_9HYPH2.260e-17663.57Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A2W4KRE7_9PROT1.360e-15156.48Histidine kinase n=1 Tax=Proteobacteria bacterium ... [more]
A0A2W4TWW5_9PROT8.480e-14753.92Histidine kinase n=1 Tax=Proteobacteria bacterium ... [more]
A0A7C2LU99_9HYPH4.440e-14355.45Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
UPI00198B77AA1.180e-13952.03PAS-domain containing protein n=1 Tax=Hyphomicrobi... [more]
A0A2D7F771_9HYPH2.850e-13952.81Histidine kinase n=2 Tax=Hyphomicrobiaceae TaxID=4... [more]
A0A6N6SYD4_9HYPH1.160e-13754.57Histidine kinase n=1 Tax=Hyphomicrobiaceae bacteri... [more]
A0A7Y5CYF4_HYPSQ3.610e-13750.86Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=... [more]
A0A6I0EN80_HYPSQ9.310e-13651.63Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=... [more]
A0A6I3KP58_9HYPH1.260e-13251.39Histidine kinase n=1 Tax=Hyphomicrobium album TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20380contigP-wetherbeei_contig20380:2..1228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog670307.HYPDE_34503
Preferred namedivL
PFAMsHATPase_c,HisKA,PAS_7,PAS_8
Model size1227
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
Exons1
Evalue5.38e-133
EggNOG OGsCOG0642@1|root,COG2205@2|Bacteria,1MVY8@1224|Proteobacteria,2TS5B@28211|Alphaproteobacteria,3N6K0@45401|Hyphomicrobiaceae
DescriptionHistidine kinase
Cds size1227
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186198.099097-CDS-P-wetherbeei_contig20380:1..12281683186198.099097-CDS-P-wetherbeei_contig20380:1..1228Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20380 2..1228 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20380.1.1prot_P-wetherbeei_contig20380.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20380 2..1228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20380.1.1

>prot_P-wetherbeei_contig20380.1.1 ID=prot_P-wetherbeei_contig20380.1.1|Name=mRNA_P-wetherbeei_contig20380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=409bp
AGLQLRHLVLLSLVLGASMVAFALVWTTTRRAMTVISSARAESSRLRQGL
LLAETIIKTEPQVVVCWEAGEDLRVVTHTLSSVAGVPADDRALLRFGSWL
DQASAESLKSALDPLFTTGQPFSLLLKTAAGAHLEADGRAAGTHAVLRLR
DVASYKSDLVRMLDQHAQLTGELRSGRALLDSIPMPVWLRSHDGAIQWAN
AAYIAAVEAKTLAEVQERQIELLEQNQRRMVATALSKGSDFSRRLPLIIN
GERRAHDVIVTSTEPSVSAIAVDVAALEKAESEIDRQSTTYDRTLDRIRT
GAAVFDRDQRLTFYNEAFRKLWRVDQDWLDTKPSSGEILDRLHALSRLPP
NPDYRSWRASVLDCHSSGVAYDDWWQLPDGRHLHVVAEQRHDGGVTYLFD
DATERLALE
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mRNA from alignment at P-wetherbeei_contig20380:2..1228+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20380.1.1 ID=mRNA_P-wetherbeei_contig20380.1.1|Name=mRNA_P-wetherbeei_contig20380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig20380:2..1228+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCCTCCAGCTTCGCCACCTCGTCCTGTTGTCGCTCGTGCTCGGCGC CTCGATGGTGGCCTTCGCGCTGGTGTGGACCACGACCCGCCGGGCGATGA CCGTCATCAGCAGTGCCCGCGCGGAATCCTCGCGACTGCGCCAGGGCCTT CTGCTGGCCGAAACGATCATCAAGACCGAACCCCAGGTCGTGGTGTGCTG GGAGGCCGGTGAGGATCTCCGCGTCGTCACCCATACCTTGTCGAGTGTCG CCGGCGTTCCTGCGGACGATCGCGCTCTGCTGCGCTTCGGCAGCTGGTTG GATCAGGCTTCCGCCGAAAGCCTGAAAAGCGCGCTTGATCCCTTGTTCAC CACCGGCCAGCCCTTCAGCCTGTTGCTCAAGACGGCTGCGGGCGCGCATT TGGAAGCCGACGGACGGGCCGCAGGCACCCATGCCGTACTCCGGCTCAGG GACGTCGCAAGCTACAAGAGCGACCTGGTCCGTATGCTCGACCAGCACGC CCAACTCACGGGCGAATTGCGTTCGGGCCGGGCCCTGCTCGACTCGATAC CGATGCCGGTGTGGCTGCGTTCGCACGACGGCGCCATCCAGTGGGCCAAC GCCGCCTACATCGCCGCCGTGGAGGCCAAGACGCTGGCCGAGGTCCAGGA ACGCCAGATCGAACTGCTGGAACAGAACCAGCGGCGCATGGTCGCGACGG CCCTTTCCAAAGGATCCGATTTTTCCCGCCGCTTGCCGCTGATCATCAAC GGCGAGCGCCGCGCCCACGACGTCATCGTCACCTCGACCGAGCCGTCCGT CTCCGCGATCGCCGTCGATGTCGCGGCACTCGAAAAAGCCGAGAGCGAGA TCGACCGGCAAAGCACCACCTACGACCGCACGCTCGACCGCATCCGCACA GGCGCTGCCGTGTTCGACCGCGACCAGCGCCTGACGTTCTACAACGAGGC GTTCCGCAAGCTCTGGCGGGTGGACCAGGACTGGCTCGACACCAAGCCGT CGAGCGGTGAGATCCTCGATCGGTTGCACGCCCTGTCACGGCTTCCGCCC AATCCCGACTATCGCAGCTGGCGCGCGAGCGTGCTCGACTGCCACTCCTC CGGCGTCGCCTATGACGACTGGTGGCAATTGCCCGACGGCCGTCACCTCC ACGTCGTCGCCGAACAGCGCCACGACGGCGGCGTCACCTACCTGTTCGAC GACGCCACCGAGCGGCTCGCCCTCGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20380:2..1228+

>mRNA_P-wetherbeei_contig20380.1.1 ID=mRNA_P-wetherbeei_contig20380.1.1|Name=mRNA_P-wetherbeei_contig20380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig20380:2..1228+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCCTCCAGCTTCGCCACCTCGTCCTGTTGTCGCTCGTGCTCGGCGC
CTCGATGGTGGCCTTCGCGCTGGTGTGGACCACGACCCGCCGGGCGATGA
CCGTCATCAGCAGTGCCCGCGCGGAATCCTCGCGACTGCGCCAGGGCCTT
CTGCTGGCCGAAACGATCATCAAGACCGAACCCCAGGTCGTGGTGTGCTG
GGAGGCCGGTGAGGATCTCCGCGTCGTCACCCATACCTTGTCGAGTGTCG
CCGGCGTTCCTGCGGACGATCGCGCTCTGCTGCGCTTCGGCAGCTGGTTG
GATCAGGCTTCCGCCGAAAGCCTGAAAAGCGCGCTTGATCCCTTGTTCAC
CACCGGCCAGCCCTTCAGCCTGTTGCTCAAGACGGCTGCGGGCGCGCATT
TGGAAGCCGACGGACGGGCCGCAGGCACCCATGCCGTACTCCGGCTCAGG
GACGTCGCAAGCTACAAGAGCGACCTGGTCCGTATGCTCGACCAGCACGC
CCAACTCACGGGCGAATTGCGTTCGGGCCGGGCCCTGCTCGACTCGATAC
CGATGCCGGTGTGGCTGCGTTCGCACGACGGCGCCATCCAGTGGGCCAAC
GCCGCCTACATCGCCGCCGTGGAGGCCAAGACGCTGGCCGAGGTCCAGGA
ACGCCAGATCGAACTGCTGGAACAGAACCAGCGGCGCATGGTCGCGACGG
CCCTTTCCAAAGGATCCGATTTTTCCCGCCGCTTGCCGCTGATCATCAAC
GGCGAGCGCCGCGCCCACGACGTCATCGTCACCTCGACCGAGCCGTCCGT
CTCCGCGATCGCCGTCGATGTCGCGGCACTCGAAAAAGCCGAGAGCGAGA
TCGACCGGCAAAGCACCACCTACGACCGCACGCTCGACCGCATCCGCACA
GGCGCTGCCGTGTTCGACCGCGACCAGCGCCTGACGTTCTACAACGAGGC
GTTCCGCAAGCTCTGGCGGGTGGACCAGGACTGGCTCGACACCAAGCCGT
CGAGCGGTGAGATCCTCGATCGGTTGCACGCCCTGTCACGGCTTCCGCCC
AATCCCGACTATCGCAGCTGGCGCGCGAGCGTGCTCGACTGCCACTCCTC
CGGCGTCGCCTATGACGACTGGTGGCAATTGCCCGACGGCCGTCACCTCC
ACGTCGTCGCCGAACAGCGCCACGACGGCGGCGTCACCTACCTGTTCGAC
GACGCCACCGAGCGGCTCGCCCTCGAA
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