mRNA_P-wetherbeei_contig20366.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20366.1.1
Unique NamemRNA_P-wetherbeei_contig20366.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A7X9AFN9_9BURK (Flagellar biosynthesis protein FlhA n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFN9_9BURK)

HSP 1 Score: 622 bits (1605), Expect = 2.270e-217
Identity = 326/412 (79.13%), Postives = 360/412 (87.38%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIP----FFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            GNGLITT+PAFLM T+MGM+VSRAAS+SNLGSD+  Q+ AQP AL + +AFM   G L  +GL    P+P    FF +G  + +I  +L +K  EV + A          ++KKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLL+RVTSIRRH+A+ELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVR+HA +LLGRQEVQAL+DT+KKTHPAVVK+V+PDALSLGEVQKVLQNLVKERVSIRDLVSILET+AD+VHMTKDPEMLTEF RVALSR ICKEY NNEGTINVITLDPQIEQ +Q++IQRT+ GSFLTLDPN+GQEILQAI  QV  LQERG
Sbjct:  262 GNGLITTLPAFLMSTAMGMVVSRAASESNLGSDIVQQVTAQPGALKMAAAFM---GLLGTMGLLAGMPLPLDLTFFGIGGSLFFIGTVLDKKKVEVTQVAAQVQDQQKKADTKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLDRVTSIRRHIALELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRTHANELLGRQEVQALVDTVKKTHPAVVKEVIPDALSLGEVQKVLQNLVKERVSIRDLVSILETMADHVHMTKDPEMLTEFCRVALSRVICKEYSNNEGTINVITLDPQIEQLVQSAIQRTDMGSFLTLDPNVGQEILQAISQQVNTLQERG 670          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A355TU30_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TU30_9BACT)

HSP 1 Score: 597 bits (1540), Expect = 8.290e-208
Identity = 312/415 (75.18%), Postives = 353/415 (85.06%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMG---YIARLLTRKSTEVVEEAVAXXXXXXXX----ESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            GNGL+TT+PAFLM T+MG++VSRAAS+SNLG D+  Q+  QP AL +  +FML L FLS++   G P    F L  + G   ++ + L +K+ E V  A              E KKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLL+RVTSIRRH+A+ELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSV+ATQLTEVVR+HA+++LGRQEVQALIDT+KKTHPAVVK++ PDAL LGE+QKVLQNLVKERVS+RDLVSILET+ DNVH+TKDPEMLTEF RV+LSR ICK+Y NN+GTINVITLDP+IEQ IQ +IQR+E GSFLTLDPN+GQEILQAI +Q   LQERG
Sbjct:  238 GNGLMTTLPAFLMSTAMGLVVSRAASESNLGRDVVEQVSGQPGALKMAGSFMLVLAFLSLIA--GLPKFMAFTLACIGGALFFLGKQLEKKNMEAVAVATGGAATAQEQKKKTEQKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLDRVTSIRRHIALELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVIATQLTEVVRTHASEMLGRQEVQALIDTVKKTHPAVVKEIFPDALGLGEIQKVLQNLVKERVSVRDLVSILETMGDNVHITKDPEMLTEFCRVSLSRVICKDYCNNDGTINVITLDPKIEQMIQGAIQRSELGSFLTLDPNLGQEILQAISNQANALQERG 650          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A1V5PLY4_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PLY4_9BACT)

HSP 1 Score: 528 bits (1361), Expect = 1.860e-180
Identity = 265/424 (62.50%), Postives = 332/424 (78.30%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEV----------------VEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            GNGLITT+PAFLM T+MGM+VSRAASD+NLG+D+  Q+ AQP+AL++   FM+    L +  +   PP+PF ILG     +  +L R   E+                 E+ +A          KKPE+VVQLM VDPISLEVGRGLL+LVDPNQGAKLL+RVTSIRRH+A+E+GIVVPGVRFRDNLQLKPN Y+IKIK+IEVA GEV +N+FLAIGPE  LK+L+G +  DPTYGMP VWI+ +QRG+AER+GCMIFDPVSV+ATQ+TE++R+HA++LLGRQEV AL++T+KK+HPAVVK++ PD  +LGE+QKVLQNLVKE++SIRDLV+ILETL D  H+TKD +MLTE+VR A+ R IC+EY NNEGTI VITLDP++E  I  ++QRTE GSFLTLDPN GQ IL A+G Q+Q L ++G
Sbjct:  243 GNGLITTLPAFLMSTAMGMVVSRAASDANLGADVFKQVTAQPKALLVAGVFMMVFFVLGITNILPLPPVPFLILGIAACVVGWILQRHHGEIDISNPKHEAPATAEQAAEQQIAETKAEDEEVKKKPENVVQLMAVDPISLEVGRGLLALVDPNQGAKLLDRVTSIRRHIALEMGIVVPGVRFRDNLQLKPNGYIIKIKDIEVAAGEVIINKFLAIGPENHLKSLKGPRCFDPTYGMPAVWITADQRGEAERVGCMIFDPVSVMATQITEIIRTHASELLGRQEVAALLETVKKSHPAVVKEIYPDLFTLGEIQKVLQNLVKEKLSIRDLVTILETLGDYAHITKDTDMLTEYVRQAMCRVICREYQNNEGTITVITLDPELENIIAGAVQRTEYGSFLTLDPNTGQMILTAMGEQIQALMDKG 666          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A1E4EM34_9BACT (Uncharacterized protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4EM34_9BACT)

HSP 1 Score: 482 bits (1241), Expect = 1.720e-163
Identity = 243/408 (59.56%), Postives = 315/408 (77.21%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            GNGLITTVPAFLM TSMG++V+RAAS SNL  DL  Q+ AQP+AL + +  + G+G L + GLF FP  PF +L  ++ +  + L  +    ++            + + P  V  +M+VDPI++EVGRGLL LV+P++ AKL+ RV +IRRH+A+ELGI+VPGVRFRDNLQL PN+YVIK++ +EVA+GEV  NQFLAIGPEEKLKNLRGTKTVDPTY MPGVWISPEQRGDAERLGCM+FDPVSV+ATQ+TEV+R+ AA+LLGRQEVQAL+D IK+  P VVK+   D LS+G++QKVL NL+ ERVSIRDL  ILE LAD+V +TKDP++LTEFVRV L+  IC++Y+NN+  +NVI+LDP+IE++++ ++ R   G  L LDP  GQ IL  +G +V+ L+ERG
Sbjct:  178 GNGLITTVPAFLMSTSMGLIVTRAASQSNLAQDLILQLTAQPRALKLATQALFGMGMLGLTGLFAFPSTPFLVLSCVLHFCLKSLESERNAAIQVVETKDDQVKAVKRRDPVEVTTIMEVDPIAMEVGRGLLGLVNPDEEAKLISRVVAIRRHLALELGIIVPGVRFRDNLQLAPNSYVIKMRNLEVARGEVNCNQFLAIGPEEKLKNLRGTKTVDPTYAMPGVWISPEQRGDAERLGCMLFDPVSVMATQMTEVLRARAAELLGRQEVQALLDLIKRAKPMVVKEATQD-LSVGDIQKVLCNLLSERVSIRDLSRILECLADHVGVTKDPDLLTEFVRVRLAANICEDYVNNDKMLNVISLDPEIERSLRQAMHRDVMGLQLNLDPREGQHILSCLGKEVESLRERG 584          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A7X6WME2_9FIRM (Flagellar biosynthesis protein FlhA n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7X6WME2_9FIRM)

HSP 1 Score: 381 bits (979), Expect = 3.140e-124
Identity = 193/408 (47.30%), Postives = 284/408 (69.61%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            G+GL+T +PA L+ T+ G++V+RA S+S+LG +L  QI+ +PQ L+I +A ++      ++GL G P +P F++   +  I+    R     V +  A        E KKPE+V+ L+QVDP+ LE+G  L+ LVD NQG  LL+RV  IRR  A+ELG+VVP +R RDN+QL+PN+Y+IKIK ++VAQGE+ ++ +LA+ P  +  +++G  T +P +G+P  WI+   R  AE  G  + DP SVVAT LTEV++ HA ++LGRQ+VQ L+D +K+ +PAVV +++PD LS+GEVQKVL NL++ERV IRDLV+ILETLAD   +TKD ++LTE+VR AL R I K + N + T++VITLDP+IEQ I+ S+Q ++ G+F  L+P   Q+++Q I  QV+Q  + G
Sbjct:  166 GDGLVTQIPALLISTAAGIVVTRATSESHLGQELIGQILTRPQVLIIAAAVLV------LMGLVGLPALPLFVMAGFLTVISLSYQRVLKHSVVQEAAKEKEQEIEEIKKPENVISLLQVDPMELEMGYALIPLVDANQGGDLLDRVVMIRRQCALELGLVVPPIRIRDNMQLRPNSYIIKIKGVKVAQGEIMIDHYLAMSPGIEDPSIQGINTKEPAFGLPAKWINSAMREKAELSGYTVVDPPSVVATHLTEVIKMHAHEILGRQDVQTLLDNVKQNYPAVVNELIPDMLSVGEVQKVLANLLRERVPIRDLVTILETLADYARITKDIDVLTEYVRQALGRHISKLFANEDNTLSVITLDPEIEQLIRDSLQTSDYGTFAALEPQQAQKLIQRISQQVEQAVQHG 567          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A1M6G7U2_9CLOT (Flagellar biosynthesis protein FlhA n=1 Tax=Lutispora thermophila DSM 19022 TaxID=1122184 RepID=A0A1M6G7U2_9CLOT)

HSP 1 Score: 382 bits (982), Expect = 6.290e-124
Identity = 200/408 (49.02%), Postives = 286/408 (70.10%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            G+GL++ +PA L+ T+ G++V+RAAS+SNLG+D++ Q+ +QP+AL I S      G L +L   G P +P  +L  L+ ++   L R   E  +E  A        E +KPE+V+ L+QVDPI LE G G+L LVD NQG  LL+R+  IRR  A++LGIVVP +R RDN+QLKPN YVIKIK  +VA GE+  + +LA+ P     +L G KTV+P +G+P VWI+  QR  AE +G  + DP S++AT LTEV+++HAA+LLGRQEVQ LID +K+T+PA+V +V+P  LSLGE+ KVL NL+KE VSIRD+V+I+ETLAD   +TKDP++LTE+VR ALSR+I K ++N +    VITL  ++EQ I  S+Q+T+ GS++++DPN+ Q I + +  ++Q+    G
Sbjct:  228 GDGLVSQIPALLISTATGIIVTRAASESNLGNDMTRQLFSQPRALYIAS------GVLFLLAFTGLPALPNIMLSLLLAFMGYNLDRTIKETEKEEEAIYQDNEAEEMRKPENVMSLLQVDPIELEFGYGILPLVDVNQGGDLLDRLVMIRRQCALDLGIVVPIIRLRDNIQLKPNEYVIKIKGTDVASGEIVFDNYLAMNPGTAEGDLEGIKTVEPAFGLPAVWINESQREKAEMMGYTVVDPPSIIATHLTEVIKAHAAELLGRQEVQKLIDNLKETYPALVDEVLPKILSLGEIHKVLTNLLKENVSIRDMVTIMETLADYGVLTKDPDILTEYVRQALSRSITKRFINGKKA-KVITLGQELEQTIMDSVQQTDYGSYISIDPNITQVIARNLMKEIQKFMSMG 628          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A8A0RPR4_9FIRM (Flagellar biosynthesis protein FlhA n=1 Tax=Koleobacter methoxysyntrophicus TaxID=2751313 RepID=A0A8A0RPR4_9FIRM)

HSP 1 Score: 381 bits (978), Expect = 2.570e-123
Identity = 192/401 (47.88%), Postives = 287/401 (71.57%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQV 1206
            G+GL++ +PA L+ T+ G++V+RAASDSNLG DL  QI++ P+ L+I SA +  LG +      G P IPFF+L  +MG+    +     + + +             KKPE+VV L+QVDPI LE G G++ L D NQG  LL+RV  IRR  A+E+GI+VP +R RDN+QL+PN YVIKIK +EV++GE++ + +LA+ P    + + G +TV+P +G+P VWIS E++  AE LG  + D  SV+AT LTEV++ +A +LLGRQEV+ L D++K++HPA+++++VP  LSLGE+QKVL NL+KE +SIRDLV+I ETLAD  ++TKDP+MLTE+VR ALSR I K+Y+  +  + VITLDP++E+ I+ SIQ+T+ G++L+++P + Q+I  ++ +++
Sbjct:  227 GDGLVSQIPALLISTATGIIVTRAASDSNLGEDLLKQILSHPKVLLIASAALAFLGIMP-----GLPTIPFFVLSAIMGFSGYSMYHTGKKEISKVEEEEIEKETDYLKKPENVVSLLQVDPIELEFGYGIIPLADVNQGGDLLDRVIMIRRQCAVEMGIIVPVIRIRDNIQLRPNEYVIKIKGVEVSRGELKPDHYLAMNPGTVEEEIEGVQTVEPAFGLPAVWISKEKKDKAEMLGYTVVDSPSVIATHLTEVIKRYAHELLGRQEVKMLADSVKESHPALIEELVPKVLSLGEIQKVLANLLKEGISIRDLVTIFETLADYGNITKDPDMLTEYVRQALSRVITKKYVY-DNRLKVITLDPKLEELIRDSIQQTDHGNYLSINPEITQKIFTSLSNEI 621          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A7C2LEP6_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2LEP6_9BACT)

HSP 1 Score: 381 bits (978), Expect = 6.870e-123
Identity = 208/399 (52.13%), Postives = 285/399 (71.43%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILG--TLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAI 1194
            GNGLI+ +P+FL+ T+MG++VSRAAS+SNLG D+ SQ+  QP+AL I +A     GFL+++ LFG      F+L    L  Y++     K  EV  +   XXXXXXXX      + +    V+ +SLE+GR LL LVD  QG KLLER+ S+R  +A E+GI++PGV+ +DN+ LKP+ YVIKIK ++V QGE  +N+FLAIGPE  +K L G  TVDP YG+PGVWI P  +  AE+LGCM+FDPVSV+A+ LTEV+R++AA++LGRQE   LI+ +KKTHPAVVKDV+P+ +S+GEVQKVLQNL++E++ +RDLV+I+E LAD V  TKD   LTE+VR++L+  I  + +  E  I    LDPQIEQ I  ++Q+TE G+F  LDPN+ Q +L ++
Sbjct:  254 GNGLISILPSFLVSTAMGIIVSRAASESNLGEDVISQLTGQPKALKIAAAAS---GFLALMSLFGMGLPWHFLLAFAALFYYLSTKAENKQVEVEVQKQXXXXXXXXXXXXXXXTAMVYTTVETLSLELGRMLLGLVDEAQGKKLLERIPSVRIAIAKEVGIIMPGVQVKDNMDLKPSMYVIKIKGVKVGQGEAHINKFLAIGPENVIKQLNGINTVDPAYGLPGVWIEPADKPQAEKLGCMLFDPVSVIASHLTEVIRNNAAEVLGRQETSLLIENLKKTHPAVVKDVIPELISIGEVQKVLQNLLREKIPVRDLVTIIEALADAVRYTKDIYELTEYVRISLAPAI-SDMLAKENIIYAAALDPQIEQIILQNLQKTEFGTFPVLDPNVSQSLLMSV 648          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A139CL31_9FIRM (Flagellar biosynthesis protein FlhA (Fragment) n=1 Tax=Candidatus Frackibacter sp. T328-2 TaxID=1785949 RepID=A0A139CL31_9FIRM)

HSP 1 Score: 373 bits (958), Expect = 1.110e-122
Identity = 185/408 (45.34%), Postives = 284/408 (69.61%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQLQERG 1227
            G+GL++ +PA L+ T+ G++V+RAAS+SNLG+DLS+QI AQP++L+I S  ++ L F+      G P IPF IL  ++G +  +L +   E+ EE  A        + ++ ES+ +L++VDP+ +EVG  L+ LV P QG  LL+RV+ IRR  A+ELGI++P +R RDN+QL+PN Y + ++ I++AQ E+ +N ++A+      + L G +T +P +G+P +WI+ EQ+  AE  G  + DP SVVAT LTE+++ HA +LLGRQEV+ LID +++ + AVV +++PD +S+GE+QKVLQNL++E V +RDLV+ILETLAD    T D ++LTE+VR ALSR I + Y +    INV+TL P++E+ I  SI+ TE GS++T+DPN  Q++   +  Q+QQ+  +G
Sbjct:   42 GDGLVSQIPALLISTATGIVVTRAASESNLGTDLSNQIFAQPKSLLIVSGLLVILAFIG-----GLPTIPFLILAVILGGLGYVLYQTEQELTEEIAATEEEEEIAQYQEQESIDELLRVDPMEVEVGYNLIPLVVPEQGGDLLDRVSMIRRQCALELGIIIPPIRIRDNMQLEPNRYRVNLRGIKIAQHEIMINHYMAMDSGMVTEELDGIETTEPAFGLPAMWITEEQKEKAELAGYTVVDPPSVVATHLTELIKQHAHELLGRQEVKELIDNLREDYSAVVDELIPDLMSIGEIQKVLQNLLREGVPVRDLVTILETLADQARNTNDTDILTEYVRQALSRQISELYKDENNNINVLTLAPELEEKISNSIEHTEQGSYVTMDPNAAQQLFNNLSQQIQQMMSQG 444          
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Match: A0A2M7ANB5_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_9 TaxID=1973916 RepID=A0A2M7ANB5_9BACT)

HSP 1 Score: 377 bits (967), Expect = 1.630e-121
Identity = 192/404 (47.52%), Postives = 282/404 (69.80%), Query Frame = 1
Query:    4 GNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGSAFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAXXXXXXXXESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTSIRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLAIGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVATQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQKVLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKEYMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGSQVQQL 1215
            G+GL+ ++P+ LM T+ G++V+ A S++NLG D++ QI++QP+ + + S  +L  G +      G P +PF +L  L+G +A  L + +   VE+            +K PESVV L+QVD + LE+G  L+ LVD  QG  LL+RVT IRR  A++LG+VVP +R RDN+QLKP  Y IKIK +EVA+GEV +  +LA+ P E  + + G KT +P +G+P VWI+  Q+  AE LG  + D  SV+AT LTEV+RSHAA++LGRQEVQ+++D +K+T+PAVV++++P+ L++GEVQKVLQNL++ERVSIRD+V+ILETLAD    +KD ++LTE+VR +LSR+IC++Y N EG I V+TLDP +EQ I  +IQ+T  G++L          L A  +QV+++
Sbjct:  241 GDGLLASLPSLLMSTAAGIMVTNAVSEANLGQDMTRQILSQPRVISVVSVVLLFFGIIP-----GMPKLPFLVLAALVGGLAYALQQSAR--VEKVEKAEEEKRAVAAKPPESVVSLLQVDILELEIGYALIPLVDVEQGGDLLDRVTMIRRQCALDLGLVVPPIRIRDNMQLKPPVYSIKIKGVEVARGEVMLEHYLAMNPGEVTEEIEGEKTKEPAFGLPAVWIASSQKERAESLGYTVVDCTSVIATHLTEVIRSHAAEILGRQEVQSIVDNLKQTYPAVVEELIPNLLTIGEVQKVLQNLLRERVSIRDMVTILETLADYAKQSKDMDILTEYVRASLSRSICQQYQNAEGKIAVVTLDPNLEQKISEAIQQTPQGAYLAXXXXXXXXXLSATSAQVEKM 637          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20366.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AFN9_9BURK2.270e-21779.13Flagellar biosynthesis protein FlhA n=1 Tax=Burkho... [more]
A0A355TU30_9BACT8.290e-20875.18Flagellar biosynthesis protein FlhA n=1 Tax=bacter... [more]
A0A1V5PLY4_9BACT1.860e-18062.50Flagellar biosynthesis protein FlhA n=1 Tax=bacter... [more]
A0A1E4EM34_9BACT1.720e-16359.56Uncharacterized protein n=1 Tax=bacterium SCN 62-1... [more]
A0A7X6WME2_9FIRM3.140e-12447.30Flagellar biosynthesis protein FlhA n=1 Tax=Syntro... [more]
A0A1M6G7U2_9CLOT6.290e-12449.02Flagellar biosynthesis protein FlhA n=1 Tax=Lutisp... [more]
A0A8A0RPR4_9FIRM2.570e-12347.88Flagellar biosynthesis protein FlhA n=1 Tax=Koleob... [more]
A0A7C2LEP6_9BACT6.870e-12352.13Flagellar biosynthesis protein FlhA n=1 Tax=bacter... [more]
A0A139CL31_9FIRM1.110e-12245.34Flagellar biosynthesis protein FlhA (Fragment) n=1... [more]
A0A2M7ANB5_9BACT1.630e-12147.52Flagellar biosynthesis protein FlhA n=1 Tax=Armati... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20366contigP-wetherbeei_contig20366:2..1228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1069080.KB913028_gene744
Preferred nameflhA
PFAMsFHIPEP
Model size1227
Max annot lvl909932|Negativicutes
KEGG koko:K02400
KEGG TC3.A.6.2,3.A.6.3
KEGG Pathwayko02040,map02040
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.09e-121
EggNOG OGsCOG1298@1|root,COG1298@2|Bacteria,1TQBM@1239|Firmicutes,4H2W2@909932|Negativicutes
DescriptionRequired for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Cds size1227
COG categoryN
BRITEko00000,ko00001,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.6718297-CDS-P-wetherbeei_contig20366:1..12281683186197.6718297-CDS-P-wetherbeei_contig20366:1..1228Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20366 2..1228 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20366.1.1prot_P-wetherbeei_contig20366.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20366 2..1228 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20366.1.1

>prot_P-wetherbeei_contig20366.1.1 ID=prot_P-wetherbeei_contig20366.1.1|Name=mRNA_P-wetherbeei_contig20366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=409bp
MGNGLITTVPAFLMWTSMGMLVSRAASDSNLGSDLSSQIVAQPQALMIGS
AFMLGLGFLSMLGLFGFPPIPFFILGTLMGYIARLLTRKSTEVVEEAVAQ
QEEKKKSESKKPESVVQLMQVDPISLEVGRGLLSLVDPNQGAKLLERVTS
IRRHVAMELGIVVPGVRFRDNLQLKPNAYVIKIKEIEVAQGEVQVNQFLA
IGPEEKLKNLRGTKTVDPTYGMPGVWISPEQRGDAERLGCMIFDPVSVVA
TQLTEVVRSHAADLLGRQEVQALIDTIKKTHPAVVKDVVPDALSLGEVQK
VLQNLVKERVSIRDLVSILETLADNVHMTKDPEMLTEFVRVALSRTICKE
YMNNEGTINVITLDPQIEQAIQASIQRTEAGSFLTLDPNMGQEILQAIGS
QVQQLQERG
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mRNA from alignment at P-wetherbeei_contig20366:2..1228-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20366.1.1 ID=mRNA_P-wetherbeei_contig20366.1.1|Name=mRNA_P-wetherbeei_contig20366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig20366:2..1228- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAACGGCCTGATTACCACGGTGCCGGCCTTCTTGATGTGGACTTC GATGGGTATGCTCGTGTCGCGCGCCGCCTCCGACTCCAACCTCGGCTCCG ACCTCTCCAGCCAGATTGTGGCCCAACCGCAGGCCCTGATGATCGGCTCG GCCTTCATGCTCGGCCTCGGATTCCTGAGCATGCTCGGGCTCTTCGGCTT CCCGCCGATTCCGTTCTTTATCCTGGGAACTCTGATGGGCTATATCGCCC GCCTGCTGACGCGCAAGTCGACCGAAGTGGTCGAGGAAGCCGTGGCCCAG CAGGAAGAGAAGAAGAAGTCCGAGAGCAAGAAGCCCGAGAGCGTCGTCCA GCTGATGCAGGTCGACCCCATCTCTCTCGAAGTCGGCCGCGGCCTCTTGA GCCTGGTGGACCCCAACCAGGGCGCCAAACTTCTCGAACGCGTCACCTCG ATTCGCCGTCACGTCGCTATGGAGCTCGGTATCGTGGTTCCCGGCGTGCG CTTCCGCGACAACCTGCAGCTCAAGCCCAACGCTTACGTCATCAAGATCA AGGAAATCGAGGTCGCCCAGGGCGAGGTGCAGGTCAACCAGTTCCTCGCC ATCGGCCCCGAGGAGAAGCTCAAGAACCTGCGCGGCACCAAGACCGTCGA CCCGACCTACGGTATGCCGGGCGTCTGGATCTCCCCCGAGCAGCGCGGCG ACGCCGAGCGTCTCGGTTGTATGATCTTCGACCCCGTCTCCGTGGTCGCC ACCCAACTCACCGAGGTCGTCCGCAGCCACGCCGCGGACCTCCTCGGTCG TCAGGAAGTTCAGGCCCTCATCGACACCATCAAGAAGACCCACCCGGCTG TGGTCAAGGACGTTGTCCCTGACGCGCTCAGTCTCGGTGAAGTCCAGAAG GTGCTGCAGAACCTGGTCAAGGAACGCGTATCCATCCGCGACCTCGTCAG TATCCTCGAAACTTTGGCCGACAACGTGCATATGACCAAGGACCCCGAGA TGCTCACCGAGTTCGTGCGCGTGGCTCTCTCGAGAACCATCTGCAAAGAG TATATGAACAACGAGGGCACTATCAACGTGATCACCCTCGACCCGCAGAT CGAGCAGGCCATTCAGGCCAGCATTCAGCGCACCGAGGCCGGTTCGTTCC TGACGCTCGACCCGAATATGGGCCAGGAGATCCTCCAGGCCATCGGTTCC CAGGTGCAGCAGCTGCAAGAGCGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20366:2..1228-

>mRNA_P-wetherbeei_contig20366.1.1 ID=mRNA_P-wetherbeei_contig20366.1.1|Name=mRNA_P-wetherbeei_contig20366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig20366:2..1228- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAACGGCCTGATTACCACGGTGCCGGCCTTCTTGATGTGGACTTC
GATGGGTATGCTCGTGTCGCGCGCCGCCTCCGACTCCAACCTCGGCTCCG
ACCTCTCCAGCCAGATTGTGGCCCAACCGCAGGCCCTGATGATCGGCTCG
GCCTTCATGCTCGGCCTCGGATTCCTGAGCATGCTCGGGCTCTTCGGCTT
CCCGCCGATTCCGTTCTTTATCCTGGGAACTCTGATGGGCTATATCGCCC
GCCTGCTGACGCGCAAGTCGACCGAAGTGGTCGAGGAAGCCGTGGCCCAG
CAGGAAGAGAAGAAGAAGTCCGAGAGCAAGAAGCCCGAGAGCGTCGTCCA
GCTGATGCAGGTCGACCCCATCTCTCTCGAAGTCGGCCGCGGCCTCTTGA
GCCTGGTGGACCCCAACCAGGGCGCCAAACTTCTCGAACGCGTCACCTCG
ATTCGCCGTCACGTCGCTATGGAGCTCGGTATCGTGGTTCCCGGCGTGCG
CTTCCGCGACAACCTGCAGCTCAAGCCCAACGCTTACGTCATCAAGATCA
AGGAAATCGAGGTCGCCCAGGGCGAGGTGCAGGTCAACCAGTTCCTCGCC
ATCGGCCCCGAGGAGAAGCTCAAGAACCTGCGCGGCACCAAGACCGTCGA
CCCGACCTACGGTATGCCGGGCGTCTGGATCTCCCCCGAGCAGCGCGGCG
ACGCCGAGCGTCTCGGTTGTATGATCTTCGACCCCGTCTCCGTGGTCGCC
ACCCAACTCACCGAGGTCGTCCGCAGCCACGCCGCGGACCTCCTCGGTCG
TCAGGAAGTTCAGGCCCTCATCGACACCATCAAGAAGACCCACCCGGCTG
TGGTCAAGGACGTTGTCCCTGACGCGCTCAGTCTCGGTGAAGTCCAGAAG
GTGCTGCAGAACCTGGTCAAGGAACGCGTATCCATCCGCGACCTCGTCAG
TATCCTCGAAACTTTGGCCGACAACGTGCATATGACCAAGGACCCCGAGA
TGCTCACCGAGTTCGTGCGCGTGGCTCTCTCGAGAACCATCTGCAAAGAG
TATATGAACAACGAGGGCACTATCAACGTGATCACCCTCGACCCGCAGAT
CGAGCAGGCCATTCAGGCCAGCATTCAGCGCACCGAGGCCGGTTCGTTCC
TGACGCTCGACCCGAATATGGGCCAGGAGATCCTCCAGGCCATCGGTTCC
CAGGTGCAGCAGCTGCAAGAGCGCGGC
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