mRNA_P-wetherbeei_contig20345.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: UPI0019C35434 (Response regulator n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019C35434) HSP 1 Score: 245 bits (626), Expect = 8.070e-75 Identity = 135/264 (51.14%), Postives = 179/264 (67.80%), Query Frame = 1
Query: 1 ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVE--PAHWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLAETRM-----DMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
ETI DPTR+RQ+L+NL+GN KFT +G++R+++ L E ++ TV D+GIG+ E + LF PF+QADTS TRR GGTGLGLAIS++L+ +GG I +S+ VG+TFRFT+ TG L V +++ P QA R +L+GR VL+VDD D+R L++SYL +AGA V A +G AAL R D+V+LDMQMPVLDGY TAR LR PI+A+TA+AM GDRE CL AGC+ YL+KPV R A++
Sbjct: 121 ETIEGDPTRMRQVLVNLVGNGIKFTDEGEVRVLVELHRERGELELTVSDTGIGMDEELQRRLFVPFNQADTSNTRRHGGTGLGLAISKRLVDAMGGRISAQSEPGVGSTFRFTVPTGPLGGVGMIDALPVRDPAPPGQAVAR----TLAGRTVLLVDDVSDVRNLLKSYLGDAGAQVVEAGDGAAALVAFEAMRREHRLPDVVLLDMQMPVLDGYDTARGLRSLGHAKPIIALTAAAMKGDRERCLDAGCDDYLTKPVSRDALL 380
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A5C6EDL8_9BACT (Aerobic respiration control sensor protein ArcB n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EDL8_9BACT) HSP 1 Score: 237 bits (605), Expect = 1.910e-73 Identity = 131/260 (50.38%), Postives = 178/260 (68.46%), Query Frame = 1
Query: 1 ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLAE---TRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
E I++DP RLRQIL+NL+GNA KFT G ++++ DA +++ F V D+GIGI E + LF+PF QAD + TR FGGTGLGLAI R+L H LGG + ++S+ G TF TI + + L+EP D QA R L+ KVLVVDDRRDIR+L Q ++E+AG TV TA NGQ A+D + + + ++V+DMQMPV+DGYA RELRRR +PI+A+TA+AM DR+ CLAAGC+ Y +KP+D +A++
Sbjct: 104 EAINTDPIRLRQILLNLVGNAIKFTDAGAVKVVCRYDAGPDVMIFDVIDTGIGIREQDQAQLFQPFVQADNTSTRSFGGTGLGLAICRRLAHALGGDVIMKSEYGKGNTFTLTINAAASGE--LIEPNLTL--DLQAPSRPEAIQLNA-KVLVVDDRRDIRYLAQHFIEKAGGTVVTATNGQEAIDLIYSDHPSSIQVIVMDMQMPVMDGYAATRELRRRGCQLPIIALTANAMKSDRDECLAAGCSDYTTKPLDSNALI 358
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A4Y6Q2D2_9DELT (Histidine kinase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q2D2_9DELT) HSP 1 Score: 239 bits (611), Expect = 5.720e-72 Identity = 133/263 (50.57%), Postives = 173/263 (65.78%), Query Frame = 1
Query: 1 ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLT-LDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLAETR-----MDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
ETI +DPTRLRQ+L+NL+GNA KFT G + L + +D ++F V D+GIGI E + LFEPF+QADTSVTR FGGTGLGL I R+L+ LGG +EV+S G+TF + TGSLE VA+V P + + R PLP L R VLVVDDR +IRFL + ++E AG V T NG+ A+ +A+ D VV+DMQMPV+DGY +R LR+ I+A+TA+AM GDR+ CL AGCN Y+ KP+D +V
Sbjct: 168 ETIETDPTRLRQVLVNLVGNAIKFTDDGHVVLKVDFIDEAQSQIRFRVIDTGIGISETHQRRLFEPFAQADTSVTREFGGTGLGLTICRRLVERLGGRLEVDSTLGEGSTFTVIMPTGSLENVAMVTPRKGITMPEPQSAR-PLPKLECR-VLVVDDRHEIRFLARYFIERAGGVVRTCANGKEAITCVAQAEKAGNPFDAVVMDMQMPVMDGYEASRRLRQEGYEGTIVALTANAMRGDRKKCLEAGCNGYVRKPIDGPCLV 428
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A517X8M9_9PLAN (Autoinducer 2 sensor kinase/phosphatase LuxQ n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517X8M9_9PLAN) HSP 1 Score: 244 bits (622), Expect = 1.380e-71 Identity = 135/261 (51.72%), Postives = 181/261 (69.35%), Query Frame = 1
Query: 7 ISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENE--LVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPA--HWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYL--AETRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
I SDP RLRQIL+NL+GNA KFTS+G IRL+++ DA E +QF V D+GIGI + + LF+ FSQ DTSVTR FGGTGLGLAIS +L +LGG+IEV SQ GTTF I G +E +L++P H + DK + +G PSLS VLVVDDRRDIR++V+ +L ++GA V +A++G A++ + E DM++LDMQMP LDGY TA LR PI+A+TA AM GD CLA+GC++++SKP++ ++
Sbjct: 578 IESDPKRLRQILVNLIGNAVKFTSEGSIRLVISYDASGEQPAIQFEVIDTGIGITDAQLSQLFQEFSQGDTSVTRAFGGTGLGLAISARLARMLGGSIEVHSQSGSGTTFTCKITAGLVESASLIQPQNKHKTSNDKPDS-QGSAPSLSCN-VLVVDDRRDIRYIVKQFLIKSGAQVESANDGLEAIERIKQGEKSYDMILLDMQMPRLDGYQTAERLRSLGFKRPIIALTADAMHGDMTRCLASGCDAFISKPINTKELI 836
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A2G1W541_9BACT (Hybrid sensor histidine kinase/response regulator n=2 Tax=Rhodopirellula bahusiensis TaxID=2014065 RepID=A0A2G1W541_9BACT) HSP 1 Score: 239 bits (611), Expect = 4.360e-70 Identity = 126/261 (48.28%), Postives = 175/261 (67.05%), Query Frame = 1
Query: 1 ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAIRGPLPSLS-GRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLAETR---MDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
ETI +D RLRQIL+NLLGNA KFT+ G++RL + D ++L+ F V D+G+GI + + LFEPF+Q D++ TR +GGTGLGL I R+L H LGG I+V SQ G+ F + + K LV+P + + P P + VLVVDDRRDIR+L Q ++E+AG+TV TA NGQ A+D++ +D++V+DMQMPV+DGY ELRRR+ +PI+A+TA+AM DRE CLAAGC Y +KP+D+ ++
Sbjct: 568 ETIRTDAIRLRQILLNLLGNAIKFTNDGEVRLHIRYDERSKLLNFDVIDTGVGISPDKLDTLFEPFTQVDSTSTRSYGGTGLGLTICRRLSHALGGQIDVSSQPGKGSRFTLCLKVNASGK--LVQP----NLNSLPTVEKPQPEIQLSTSVLVVDDRRDIRYLAQHFIEKAGSTVYTATNGQEAIDFIESPDSPPVDLIVMDMQMPVMDGYEATTELRRRKCKLPIIALTANAMKSDREECLAAGCTDYTTKPLDQQKLI 822
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A7W5E0V7_9BACT (Two-component system CheB/CheR fusion protein n=3 Tax=Rhodopirellula TaxID=265488 RepID=A0A7W5E0V7_9BACT) HSP 1 Score: 235 bits (600), Expect = 9.610e-70 Identity = 128/259 (49.42%), Postives = 181/259 (69.88%), Query Frame = 1
Query: 4 TISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYL-AETR--MDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
T+++D R+RQIL+NL+GNA KFT +G++ L++ D E ++ F V D+GIGI E LF+PF QAD + TR FGGTGLGLAI ++L H LGG ++VES+ VG+ F +IA + V L++P G D + RG LS R VLVVDDRRDIR+L Q ++E+AG V TA NG+ A+D++ +ET+ +D++V+DMQMPV+DGY ELR+R +PI+A+TA+AM DR+ACLAAGC Y +KP++ ++
Sbjct: 390 TLNTDAIRVRQILVNLVGNAIKFTDEGKVELIVRFDQEASVLHFEVADTGIGIRSEDHESLFDPFVQADNTSTRSFGGTGLGLAICQRLAHALGGEVKVESEFGVGSVFTLSIAVA--KGVPLIKPD--LGLDIHSEQRGVEVELSAR-VLVVDDRRDIRYLAQHFIEKAGGEVLTATNGKEAIDFIESETKPDVDLIVMDMQMPVMDGYEATSELRKRGCTLPIIALTANAMKSDRDACLAAGCTDYTTKPLNSRKLI 643
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A3ZWS7_9BACT (Sensory box sensor histidine kinase/response regulator n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZWS7_9BACT) HSP 1 Score: 238 bits (608), Expect = 1.430e-69 Identity = 130/259 (50.19%), Postives = 175/259 (67.57%), Query Frame = 1
Query: 7 ISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAE--NELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAI--RGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLAETRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
+ +D RL+Q+L+N++GNA KFT G++R++ L+AE + F V D+GIGIP+G+ E +F+PFSQAD+SVTRRFGGTGLGL ISR L LLGG++ ES E +G+ F T+ G+L + +PA ED A+ LPSLSG + LVVDD R + LE AGA + A+NGQ A+D +AE D+++LDMQMPV+DGY A +R + PI+AVTA AM GDRE CLAAGC+ YLSKP+ R ++
Sbjct: 566 VLTDAPRLKQLLLNIVGNAIKFTQTGEVRIVARLEAEATRSRLIFDVIDTGIGIPQGKLEMIFQPFSQADSSVTRRFGGTGLGLTISRNLAELLGGSLHAESVEGLGSKFTITVDAGNLTLSSEPKPA--PPEDAPTAMIHETKLPSLSGVQALVVDDGEANRRFISVVLEHAGANITMAENGQEAVDSIAEHTSDIILLDMQMPVMDGYVAAELIRFQGFTGPIIAVTAHAMQGDREKCLAAGCSGYLSKPLSREELL 822
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A5Q3L7R9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium 10988 TaxID=2603660 RepID=A0A5Q3L7R9_9BACT) HSP 1 Score: 242 bits (617), Expect = 1.870e-69 Identity = 129/263 (49.05%), Postives = 178/263 (67.68%), Query Frame = 1
Query: 4 TISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHW--SGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYLA-----ETRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
TI +DP RLRQIL+NL+GNA KFT++G I + + + E E + F + D+GIGI E + E LFEPF+QAD+S +R FGGTGLGL ISR+L +LGGTI V S +VG+TF T+ATGSL+ + +EP+ + S +K+A P + G K+L+VDDRR++R L Q +L+EAGA V T +GQ L +T D++++DMQMP+LDGY T LR +PI+A+TA AM DR+ CL AGCN Y +KP+D ++
Sbjct: 1813 TIQTDPKRLRQILLNLVGNAIKFTNEGTITIGVEIKPEKEEILFEIIDTGIGIEEEQIESLFEPFTQADSSASRTFGGTGLGLPISRRLAQMLGGTIHVSSNVNVGSTFAVTVATGSLDGIEWIEPSEYEKSFREKRAY---PEQQIQG-KILIVDDRREVRHLAQHFLQEAGAEVVTVRDGQEVLKINETFGEIDTLFDLILIDMQMPILDGYQTVARLRELGSKLPIIAMTAHAMHSDRDKCLKAGCNDYTTKPLDPQELI 2071
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A518GD28_9BACT (Aerobic respiration control sensor protein ArcB n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518GD28_9BACT) HSP 1 Score: 241 bits (615), Expect = 3.520e-69 Identity = 133/262 (50.76%), Postives = 175/262 (66.79%), Query Frame = 1
Query: 1 ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPAHWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYL-----AETRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
+TI SD RL+QIL+NL+GNA KFT +G+I++ + + + + +QF V D+GIGI + + LF+PFSQ D SVTR FGGTGLGLAIS++L LGG I V S VG+TF IATG + LVE S D + ++ PS VL+VDDRRDIRFL + L AGATV ++GQ A+D++ + T D+V+LDMQMP+LDGY+TAR++R PI+A+TA AM GD CL AGCN YLSKP+D AM+
Sbjct: 2356 KTIHSDAKRLKQILINLIGNAIKFTPKGRIQIRVRFNRQTQQLQFDVVDTGIGISDEQLPRLFKPFSQGDASVTRNFGGTGLGLAISQRLAETLGGRISVSSTAGVGSTFTIDIATGEIADSELVEYDE-SNSDVEEFLKLAPPSKLSCHVLIVDDRRDIRFLSKRILTGAGATVEECEDGQHAIDHITACFDSATCPDLVLLDMQMPILDGYSTARQMRALGFTGPIIALTADAMQGDMSKCLEAGCNDYLSKPIDAQAML 2616
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Match: A0A2E2BWH3_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BWH3_9PLAN) HSP 1 Score: 237 bits (605), Expect = 3.800e-69 Identity = 133/261 (50.96%), Postives = 178/261 (68.20%), Query Frame = 1
Query: 7 ISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENE--LVQFTVEDSGIGIPEGRKEHLFEPFSQADTSVTRRFGGTGLGLAISRQLIHLLGGTIEVESQEDVGTTFRFTIATGSLEKVALVEPA--HWSGEDKQAAIRGPLPSLSGRKVLVVDDRRDIRFLVQSYLEEAGATVGTADNGQAALDYL--AETRMDMVVLDMQMPVLDGYATARELRRRRDMVPILAVTASAMTGDREACLAAGCNSYLSKPVDRSAMV 771
I SDP LRQIL+NL+GNA KFTS+G IRL+++ DA E ++QF V D+GIGI E + LF+ FSQ DTSVTR FGGTGLGLAIS +L +LGG IEV SQ +GTTF I+ G ++ V +V P H S D ++ P+LS VLVVDDRRDIR+LV+ +L ++GA V + ++G A++ + + DM++LDMQMP LDGY TA LR PI+A+TA AM GD CLA+GC+++LSKP++ ++
Sbjct: 578 IESDPKCLRQILVNLIGNAVKFTSRGSIRLVISYDASGECPVIQFDVIDTGIGITEAQLSQLFQEFSQGDTSVTRSFGGTGLGLAISARLARMLGGNIEVTSQPGIGTTFTCKISAGQVDSVPMVHPEKKHKSTPDTSKSL-DTQPALSCN-VLVVDDRRDIRYLVKQFLTKSGAEVESVNDGLEAIERVEQGQNSFDMILLDMQMPRLDGYQTAERLRSLGFNRPIIALTADAMHGDMNRCLASGCDAFLSKPINTKELI 836 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20345.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20345.1.1 >prot_P-wetherbeei_contig20345.1.1 ID=prot_P-wetherbeei_contig20345.1.1|Name=mRNA_P-wetherbeei_contig20345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp ETISSDPTRLRQILMNLLGNATKFTSQGQIRLMLTLDAENELVQFTVEDSback to top mRNA from alignment at P-wetherbeei_contig20345:157..930+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20345.1.1 ID=mRNA_P-wetherbeei_contig20345.1.1|Name=mRNA_P-wetherbeei_contig20345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig20345:157..930+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20345:157..930+ >mRNA_P-wetherbeei_contig20345.1.1 ID=mRNA_P-wetherbeei_contig20345.1.1|Name=mRNA_P-wetherbeei_contig20345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig20345:157..930+ (Phaeothamnion wetherbeei SAG_119_79)back to top |