mRNA_P-wetherbeei_contig20341.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20341.2.1
Unique NamemRNA_P-wetherbeei_contig20341.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A537V1I7_9PROT (Branched-chain amino acid ABC transporter ATP-binding protein/permease n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537V1I7_9PROT)

HSP 1 Score: 492 bits (1266), Expect = 8.750e-168
Identity = 266/412 (64.56%), Postives = 326/412 (79.13%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAE--PAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AG +IG PTFRLRGHYF L+MLAYPLA LYVF+WLGYQE++LPMKRE P+ + QF D R Y++LA+  L+VA+LI LKVE SRFG SLMAIKQNEPAAEAAGINT R KM+A+MLS  +AA AGGLYA +LLVVTP+T+FGML+SAQALI++LFGGVG+LWGPVIGA +LVPLAE L+ ELG +LPGIQGVVYG+AII IIL+APEG+YWRV D  + +  AA P A              M AR     P  R  ++    +L L  + ++FGGL+ALDG++L++ +G ++GIIGPNGAGKTTLFNVINGF+   +G I F G+++ GL+P+QVC RGVGRTFQVVRAFPRM+VLENVI GAF  +PTDA ARD+A  AL+RVGL   QA+ +AGGLTT++LRL+ELARAL
Sbjct:  101 AGAIIGYPTFRLRGHYFALAMLAYPLATLYVFQWLGYQELTLPMKREAPLLYMQFEDPRGYVVLALGLLVVALLISLKVENSRFGMSLMAIKQNEPAAEAAGINTWRWKMLALMLSGALAAVAGGLYAVILLVVTPETVFGMLVSAQALILALFGGVGSLWGPVIGAVVLVPLAEGLNAELGDVLPGIQGVVYGVAIIAIILLAPEGVYWRVLDRFSKRAPAAAPPA-------------QMPARATNIAPLPRAPVSTGADLLVLRDIGISFGGLRALDGIDLTLPEGGLYGIIGPNGAGKTTLFNVINGFLASDSGAITFAGEAITGLRPNQVCRRGVGRTFQVVRAFPRMSVLENVIVGAFIRAPTDAVARDMALAALDRVGLVD-QAEKIAGGLTTRELRLMELARAL 498          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A5C8PDV3_9HYPH (Branched-chain amino acid ABC transporter ATP-binding protein/permease n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PDV3_9HYPH)

HSP 1 Score: 490 bits (1261), Expect = 2.870e-167
Identity = 265/407 (65.11%), Postives = 324/407 (79.61%), Query Frame = 1
Query:   16 GIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKP---ILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARA 1227
            G+PTFRLRGHYFGL+MLAYPLAMLYVFEWLGYQEV+LPMKRE P A+ QF+D R++ LL +  +++A+L  L VE SRFGR+L AIKQNE AAEAAGI+T R KM A++LSAG AAAAGGLYA VLL+VTP T+FG+L+SAQALI+ LFGGVGTLWGPVIGAAILVPLAEILHGELGS++PGIQGVVYGLAII IIL+APEGI+WR+RD   A+       APE P                 PA  P +A A+P   +L L+GV+ AFGGL+A+D V+L++ +G +HGIIGPNGAGKTTLFNVINGF+ P +GTI F+G+ ++GL+P+++C  G+GRTFQ+VRAFPRMTVLENV TGA+  +P D  A  LA  A++RVGL+ R+A  +A GLT +QLRLLELARA
Sbjct:   95 GLPTFRLRGHYFGLAMLAYPLAMLYVFEWLGYQEVTLPMKREQPAAWMQFSDPRVHALLGLGLMVLALLASLAVERSRFGRALRAIKQNEAAAEAAGIDTWRWKMPAMVLSAGFAAAAGGLYAVVLLIVTPPTVFGVLVSAQALIVCLFGGVGTLWGPVIGAAILVPLAEILHGELGSVVPGIQGVVYGLAIIGIILLAPEGIFWRLRDRFFAR-------APEVPK--------------LAPAPDPPVALARPHHELLVLEGVSRAFGGLRAIDNVSLAVEEGTVHGIIGPNGAGKTTLFNVINGFLQPDSGTIRFDGRDIVGLRPNRICRAGIGRTFQIVRAFPRMTVLENVTTGAYVATPDDREAERLALWAIDRVGLSRREAGQMAAGLTMRQLRLLELARA 480          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A537L496_9PROT (Branched-chain amino acid ABC transporter ATP-binding protein/permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L496_9PROT)

HSP 1 Score: 490 bits (1261), Expect = 5.870e-167
Identity = 268/412 (65.05%), Postives = 317/412 (76.94%), Query Frame = 1
Query:   19 IPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRA--------AANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            IPTFRLRGHYF L+MLAYPLAMLYVFEW+GYQEVSLPMKRENPVA+ QFADQR Y+++AM   +  M+I + VE SRFGRSL+AIKQN PAAEAAGI+  R +M A+MLSAG+AAAAGG YA +LLVVTPQT+FG L SAQALI++LFGGVG  WGP+IG+ IL+PLAE LH +LG ILPGIQGVVYG+AII+IILVAP+GIYW+VRD + A+RA        AA P AP  P    TAA+ +  A               P+L L  V+ AFGGL+A+D V LS+ +G I+GIIGPNGAGKTTLFNV+NGF+    G +   G+ + GLKPH+VC RGVGRTFQVVR+FPRMTVLENV+ GAF G+ TD  A  LAH AL RVG+ G Q   +AGGLTTKQLRL+ELARAL
Sbjct:  107 IPTFRLRGHYFALAMLAYPLAMLYVFEWMGYQEVSLPMKRENPVAYMQFADQRTYMVIAMLLAVACMVISMHVERSRFGRSLLAIKQNLPAAEAAGIDAARWRMYAMMLSAGMAAAAGGFYAVILLVVTPQTVFGALTSAQALIVALFGGVGVFWGPIIGSTILIPLAETLHAKLGDILPGIQGVVYGVAIIVIILVAPDGIYWKVRDRIMARRAPPAGAPRAAARPIAPATPIAWDTAASRSFGA---------------PLLELQNVSRAFGGLRAVDEVTLSVPEGMIYGIIGPNGAGKTTLFNVLNGFLAANQGAMRLAGQEIGGLKPHEVCARGVGRTFQVVRSFPRMTVLENVVIGAFVGAKTDDEAERLAHAALARVGMTGGQVHMLAGGLTTKQLRLMELARAL 503          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A7C2LRA0_9HYPH (Branched-chain amino acid ABC transporter ATP-binding protein/permease n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LRA0_9HYPH)

HSP 1 Score: 485 bits (1248), Expect = 5.090e-165
Identity = 266/410 (64.88%), Postives = 316/410 (77.07%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AG++IG+PTFRLRGHYF LSMLAYPLAMLYVFEWLGYQEV+LPM R+ P  +AQFADQR Y  LA+A  ++ M+I L VE SRFG SL+AIKQNE AA AAG++ L  KM+A+ LSA +AAAAGGLYA VLLVVTPQ+MFG+L SAQALI +LFGGVG  WGPVIGAA+LVPLAE LH ELG+I+PGIQGVVYGLAII IIL+APEGIYWR+RD L A  AA            A A A                 + KP+L L+GV   FGGL+A+DGV+L + +G IHGIIGPNGAGKTTLFNV+NGF+P   G++ F G  + GLKPH+VC RG+GRTFQVVRAFPRM+VLENVI GA+AG+ ++  A++LA  ALERVGL+G +A A A GLTT +LR +ELARAL
Sbjct:  101 AGIVIGLPTFRLRGHYFALSMLAYPLAMLYVFEWLGYQEVTLPMMRQAPALYAQFADQRAYTALALALTVLCMVISLHVERSRFGMSLLAIKQNEAAAAAAGVDALAWKMLAMALSAAMAAAAGGLYAVVLLVVTPQSMFGVLTSAQALIFALFGGVGVYWGPVIGAAVLVPLAETLHAELGNIVPGIQGVVYGLAIIAIILLAPEGIYWRIRDRLGAGPAARA---------AAVAPAXXXXXXXXXXXXXXXXPSGKPLLELEGVVRTFGGLRAVDGVSLVVREGEIHGIIGPNGAGKTTLFNVVNGFLPADAGSVRFAGAEIGGLKPHRVCRRGIGRTFQVVRAFPRMSVLENVIVGAYAGAASEREAQELALAALERVGLSGGRALATAAGLTTDELRRMELARAL 501          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A363TV37_9BRAD (Branched-chain amino acid ABC transporter n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TV37_9BRAD)

HSP 1 Score: 476 bits (1224), Expect = 1.790e-161
Identity = 265/404 (65.59%), Postives = 308/404 (76.24%), Query Frame = 1
Query:   19 IPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            IPTFRLRGHYF LSMLAYPLAMLYVFEWLGYQEVSLPMKRE P  +AQF+DQR Y++LA+A  ++ M++ L VE SRFGRSL+AIKQNEPAA AAGIN LR KM+A+MLSA                  P TMFG+L SAQALI++LFGGVG  WGPVIGAA+LVPLAE LH ELG I+PGIQGVVYG+AII+IIL+APEGIYWRVRD LAA+R AA       P P A  AA      P     RP +   +P+L L+GV+ AFGGL+A+D V+L++  G IHGIIGPNGAGKTTLFNVINGF+P   G + F+G  L GLKPH+VC  GVGRTFQVVRAFPRMTVL+NV+ GAF G+  DA A  LA EA+ RVGL+  +A AVA GLTT+QLRL+ELARAL
Sbjct:  104 IPTFRLRGHYFALSMLAYPLAMLYVFEWLGYQEVSLPMKREAPALYAQFSDQRAYMILALALAVLCMVVSLHVERSRFGRSLLAIKQNEPAASAAGINALRWKMLAMMLSAXXXXXXXXXXXXXXXXXXPPTMFGVLASAQALIVTLFGGVGVFWGPVIGAAVLVPLAETLHAELGHIVPGIQGVVYGMAIIVIILLAPEGIYWRVRDRLAARRPAA-------PLPAAIPAA---DVAPLATDLRPQIG--RPLLRLEGVSRAFGGLRAVDEVSLTVHDGQIHGIIGPNGAGKTTLFNVINGFLPADAGRMSFDGTELAGLKPHRVCALGVGRTFQVVRAFPRMTVLQNVVVGAFVGAGNDADAERLAAEAVARVGLSPAEANAVASGLTTRQLRLMELARAL 495          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A2E1XWL5_9HYPH (Branched-chain amino acid ABC transporter n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A2E1XWL5_9HYPH)

HSP 1 Score: 440 bits (1132), Expect = 1.560e-147
Identity = 242/411 (58.88%), Postives = 311/411 (75.67%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEP-AERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AG+LIG+PTFRLRGHYF L+MLAYPLA+LY+FEWLGYQEV++PM+RENPVA+ QF +QR+Y L+A+  LI A+++   +E SRFG SL+AIKQNE AAEAAGI T + K+ AI +S  IA   GG YA VLLV+TP T+FGML SAQALI++LFGGVGT+WGP+IGAAIL+PLAE LH E+G++L GIQGVVYG+AII+IILVAPEG+ W++RD + A+  +   +   E      AAAA M A P     ERP   + + +L +  ++ +FGGL+A+  V+ S+ +GA+ GIIGPNGAGKTTLFN++NGF  P  G + FEGKSLLGL P  VC RG+GRTFQV R F R++VL+NV+ GA+ G+ TD  A   A EA+  VGL  + A  +AGGLT+ + RL+ELARAL
Sbjct:  100 AGILIGLPTFRLRGHYFALAMLAYPLALLYIFEWLGYQEVAIPMERENPVAWMQFDNQRIYALIALGLLIAAIIVSRLIETSRFGMSLLAIKQNELAAEAAGIETRKWKLRAIAVSGAIAGTIGGFYAIVLLVITPDTVFGMLTSAQALIVTLFGGVGTVWGPIIGAAILIPLAETLHAEVGNLLHGIQGVVYGVAIIVIILVAPEGLMWKIRDLMQARSKSGEAEGEAE------AAAADMAASPESMHEERPHAMSGRTMLEVRNLSKSFGGLRAVQNVSFSVPEGAVIGIIGPNGAGKTTLFNLLNGFQKPDEGEVIFEGKSLLGLAPSGVCRRGIGRTFQVARPFKRLSVLDNVLIGAYVGAETDEIALQHAREAVALVGLESK-ADRLAGGLTSMEQRLMELARAL 503          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A2V7HZV8_9BACT (Branched-chain amino acid ABC transporter n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7HZV8_9BACT)

HSP 1 Score: 438 bits (1127), Expect = 8.610e-147
Identity = 246/410 (60.00%), Postives = 300/410 (73.17%), Query Frame = 1
Query:    7 VLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPS--LAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            VLIG PTFRLRGHYF L+MLAYPLA+LYVFEWLGYQEV+LPM+R++   + QFADQR Y  +A+A L+VAML+ L++E SRFG SL+AIKQNE AAEAAGI+TLR KM AI+LS   AA             TP T+FGML SAQAL+++LFGGVGTLWGPVIG++IL+P+AE LH +LG ++PGIQGVV+GL II++IL+AP+GIYW +RD    +R A           G    A T+   PA    R S      +P+L LDGVT +FGGL A++ V+L + +G I GIIGPNGAGKTTLFNV+NGF  P  G + F G  L+GLKP  VC  GVGRTFQVVRAFPRM+VL+NV+ GA+  +  D  A +LA  ALERVGL G  A+AVAGGLT  QLRL+ELARAL
Sbjct:  103 VLIGFPTFRLRGHYFALAMLAYPLALLYVFEWLGYQEVALPMRRQHAALYMQFADQRAYAAVALALLVVAMLVSLRIERSRFGMSLLAIKQNELAAEAAGIDTLRWKMRAIVLSGATAAXXXXXXXXXXXXXTPPTVFGMLTSAQALVVTLFGGVGTLWGPVIGSSILIPVAEALHAKLGHVIPGIQGVVFGLGIILVILLAPDGIYWTIRDRWQRRRPA-----------GGRPIALTVAGAPAVARPRASGNPGQGRPVLELDGVTKSFGGLLAVNDVSLDVEEGVILGIIGPNGAGKTTLFNVMNGFSAPDRGAMRFAGHDLVGLKPSAVCRLGVGRTFQVVRAFPRMSVLDNVVVGAYVAAAGDGEALELARAALERVGLPGH-AEAVAGGLTNIQLRLMELARAL 500          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A3N1KYM8_9PROT (Amino acid/amide ABC transporter membrane protein 2 (HAAT family) /amino acid/amide ABC transporter ATP-binding protein 1 (HAAT family) n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KYM8_9PROT)

HSP 1 Score: 434 bits (1116), Expect = 3.160e-145
Identity = 239/410 (58.29%), Postives = 305/410 (74.39%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AGV+IG PTFRLRGHYF L+MLAYPLA+LYVFEWLGYQE++LP+KRENP A+ QF+D R+Y LLA+A LI  M++   +E SRFGR+L+AIKQNE AAEAAGI+TL  K+ +I +S  IA   GG YA VLLVVTP ++FGML+SAQAL +S+FGG+G++WGPVIG+ IL+P+AE+LH ELG+  PGIQGV++GLAII +ILVAPEG+YW+VRD    + AA          P ATAA A  T           +A A   L++  ++ +FGGL+A+  V+  + QGAI GIIGPNGAGKTTLFN++NGF+ P  G + F G++ +GLKPH++C  GVGRTFQV+R F RM+V ENVI GA+  + TD  AR  A +A+ RVGL+   A   A  LTTK+LRL+ELARAL
Sbjct:   95 AGVVIGFPTFRLRGHYFALAMLAYPLALLYVFEWLGYQELTLPIKRENPAAYMQFSDHRIYTLLALALLIAVMVLTQAIERSRFGRALLAIKQNEAAAEAAGIDTLAWKLRSIAVSGAIAGMVGGFYAVVLLVVTPPSVFGMLVSAQALTVSMFGGIGSVWGPVIGSIILIPVAEVLHAELGARFPGIQGVIFGLAIIGVILVAPEGVYWKVRDRFRRRPAA----------PAATAAPAADTXXXXXXXXXXXVAGAPIALSVRNLSKSFGGLRAVRDVSFDVPQGAILGIIGPNGAGKTTLFNLLNGFLVPDQGEVAFHGQATIGLKPHRLCRLGVGRTFQVMRPFQRMSVAENVIVGAYVRAATDEEARRFAADAIARVGLSAI-ADRPASQLTTKELRLMELARAL 493          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A0R3MF06_9BRAD (Branched-chain amino acid ABC transporter n=2 Tax=Bradyrhizobium retamae TaxID=1300035 RepID=A0A0R3MF06_9BRAD)

HSP 1 Score: 433 bits (1114), Expect = 7.650e-145
Identity = 239/413 (57.87%), Postives = 310/413 (75.06%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAK---RAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AG LIG PTFRL GHYF L+MLAYPLA+LYVFEWLG+QEV+LP+KR+NP+A+ QFAD R+Y LLA+A ++  +L+   +E SRFG +L+AIKQNE AAEAAGINTL  K+ AI LS  IA A GG YA VLLVVTPQ++FGML+SAQAL +++FGGVGT+WGPVIG+ IL+PLAE L+ E GS  PGIQGV++GLAII +ILVAPEG++W++RD    +    A A+P AP +PA           A+P+ P ER S  A + +L +  ++ +FGGLKA+  V+  + +  I GIIGPNGAGKTTLFN++NGF+ P TG I  +G+   G KPH++C  G+GRTFQ++R F RM++ +NV+ GA+  + TDA AR LA EA+ RVGL+   A  +AG LTTK+LRL+ELARAL
Sbjct:   98 AGFLIGFPTFRLSGHYFALAMLAYPLAILYVFEWLGFQEVTLPIKRDNPIAYMQFADPRLYTLLALAMMLATILLTRVIEKSRFGMALLAIKQNEAAAEAAGINTLAWKLRAITLSGAIAGAIGGFYAVVLLVVTPQSVFGMLVSAQALTVAMFGGVGTVWGPVIGSVILIPLAETLNAEAGSRFPGIQGVIFGLAIISVILVAPEGLFWKLRDFFRKRVTSPAVASPSAPVQPA--------ATIAKPSRP-ER-SRGAGEVVLDVRNLSRSFGGLKAVQNVSFKLRRNEILGIIGPNGAGKTTLFNLLNGFLRPGTGEILLDGRDKSGRKPHELCEAGIGRTFQIMRPFLRMSISDNVVVGAYVRARTDAEARRLATEAIARVGLSDI-ADRIAGELTTKELRLMELARAL 499          
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Match: A0A0Q7WQV1_9HYPH (Branched-chain amino acid ABC transporter n=1 Tax=Mesorhizobium sp. Root554 TaxID=1736557 RepID=A0A0Q7WQV1_9HYPH)

HSP 1 Score: 432 bits (1112), Expect = 1.350e-144
Identity = 236/410 (57.56%), Postives = 304/410 (74.15%), Query Frame = 1
Query:    1 AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPVAFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEAAGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALIMSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIIIILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPAERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGKTTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPRMTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQLRLLELARAL 1230
            AGVL+G+PTFRLRGHYF L+MLAYPLA+LYVFEWLGYQEV+LPM RENP AF QF+D R+Y ++A+  LIVA+LI   +E +RFG +L+AIKQNE AAEAAGI T + K+ AI +S  IA A GG YA +L+VVTP ++F ML SAQALIM+LFGG+GT+WGPVIGAAIL+PL+E LH ELG++LPGIQGVV+G+AI+++IL+APEGI+W+VRD L        P   E           T+ + P E  ERP + + + IL +  ++  FGGLKAL  V+  + +GA+ GIIGPNGAGKTTLFN++NGF+ P+TG +  EG++L+GL+P  VC  GVGRTFQV R F R++VL+NV+ GA+  +  D  A   A EAL  VG+    A   AGGL +K+ RL+ELARAL
Sbjct:  100 AGVLVGLPTFRLRGHYFALAMLAYPLALLYVFEWLGYQEVALPMHRENPAAFMQFSDGRIYSVIALVLLIVAILISRWIETTRFGMALLAIKQNELAAEAAGIETRKWKLKAIAISGAIAGAIGGFYAVILIVVTPASVFSMLTSAQALIMALFGGIGTVWGPVIGAAILIPLSETLHAELGNVLPGIQGVVFGVAIVLVILLAPEGIFWKVRDLLGRDDKDQKPGDVE-----------TVFSDPGELIERPEIMSGRTILEVRDLSKNFGGLKALQNVSFKVPEGAVVGIIGPNGAGKTTLFNLLNGFVTPSTGEVTLEGQNLIGLQPSGVCKLGVGRTFQVARPFARLSVLDNVLVGAYVRADDDETAFRHAREALALVGMEA-DADRPAGGLPSKEQRLMELARAL 497          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20341.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537V1I7_9PROT8.750e-16864.56Branched-chain amino acid ABC transporter ATP-bind... [more]
A0A5C8PDV3_9HYPH2.870e-16765.11Branched-chain amino acid ABC transporter ATP-bind... [more]
A0A537L496_9PROT5.870e-16765.05Branched-chain amino acid ABC transporter ATP-bind... [more]
A0A7C2LRA0_9HYPH5.090e-16564.88Branched-chain amino acid ABC transporter ATP-bind... [more]
A0A363TV37_9BRAD1.790e-16165.59Branched-chain amino acid ABC transporter n=1 Tax=... [more]
A0A2E1XWL5_9HYPH1.560e-14758.88Branched-chain amino acid ABC transporter n=1 Tax=... [more]
A0A2V7HZV8_9BACT8.610e-14760.00Branched-chain amino acid ABC transporter n=2 Tax=... [more]
A0A3N1KYM8_9PROT3.160e-14558.29Amino acid/amide ABC transporter membrane protein ... [more]
A0A0R3MF06_9BRAD7.650e-14557.87Branched-chain amino acid ABC transporter n=2 Tax=... [more]
A0A0Q7WQV1_9HYPH1.350e-14457.56Branched-chain amino acid ABC transporter n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20341contigP-wetherbeei_contig20341:2..1231 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog935840.JAEQ01000020_gene2318
Preferred nameMA20_14120
PFAMsABC_tran,BCA_ABC_TP_C,BPD_transp_2
Model size1230
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01995,ko:K01998
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2.36e-145
EggNOG OGsCOG0411@1|root,COG4177@1|root,COG0411@2|Bacteria,COG4177@2|Bacteria,1MUTY@1224|Proteobacteria,2TQVU@28211|Alphaproteobacteria,43JUX@69277|Phyllobacteriaceae
DescriptionBelongs to the binding-protein-dependent transport system permease family
Cds size1230
COG categoryP
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186196.9488566-CDS-P-wetherbeei_contig20341:1..12311683186196.9488566-CDS-P-wetherbeei_contig20341:1..1231Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20341 2..1231 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20341.2.1prot_P-wetherbeei_contig20341.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20341 2..1231 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20341.2.1

>prot_P-wetherbeei_contig20341.2.1 ID=prot_P-wetherbeei_contig20341.2.1|Name=mRNA_P-wetherbeei_contig20341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp
AGVLIGIPTFRLRGHYFGLSMLAYPLAMLYVFEWLGYQEVSLPMKRENPV
AFAQFADQRMYILLAMAFLIVAMLICLKVEGSRFGRSLMAIKQNEPAAEA
AGINTLRQKMVAIMLSAGIAAAAGGLYANVLLVVTPQTMFGMLISAQALI
MSLFGGVGTLWGPVIGAAILVPLAEILHGELGSILPGIQGVVYGLAIIII
ILVAPEGIYWRVRDHLAAKRAAANPQAPEEPAPGATAAAATMTARPAEPA
ERPSLAAAKPILTLDGVTLAFGGLKALDGVNLSIMQGAIHGIIGPNGAGK
TTLFNVINGFIPPATGTIEFEGKSLLGLKPHQVCWRGVGRTFQVVRAFPR
MTVLENVITGAFAGSPTDAGARDLAHEALERVGLAGRQAQAVAGGLTTKQ
LRLLELARAL
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mRNA from alignment at P-wetherbeei_contig20341:2..1231+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20341.2.1 ID=mRNA_P-wetherbeei_contig20341.2.1|Name=mRNA_P-wetherbeei_contig20341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig20341:2..1231+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCGTCCTGATCGGCATTCCCACTTTCCGCCTGCGCGGCCACTACTT CGGCCTTTCCATGCTGGCCTATCCGCTGGCCATGCTTTACGTGTTCGAAT GGCTGGGCTACCAGGAGGTGTCCCTGCCGATGAAGCGCGAGAACCCGGTG GCGTTCGCGCAGTTCGCCGACCAGCGCATGTACATCCTCCTGGCCATGGC CTTCCTGATCGTGGCCATGCTGATCTGTCTGAAGGTGGAGGGCTCGCGCT TCGGTCGATCACTGATGGCCATCAAGCAGAACGAGCCGGCGGCCGAGGCG GCCGGCATCAACACACTGCGCCAGAAGATGGTGGCCATCATGCTCTCGGC CGGCATTGCCGCGGCCGCCGGCGGGCTTTATGCAAACGTGCTGCTGGTGG TGACGCCGCAAACCATGTTCGGCATGCTGATCTCGGCGCAGGCGCTCATC ATGTCGCTCTTCGGTGGCGTGGGCACTCTGTGGGGGCCGGTGATCGGCGC GGCCATCCTGGTGCCGCTGGCCGAAATCCTGCATGGCGAGCTGGGCTCGA TTCTGCCCGGCATACAGGGCGTGGTGTACGGCCTGGCCATCATCATCATC ATCCTGGTGGCGCCGGAAGGCATCTACTGGCGGGTGCGTGACCATCTGGC GGCCAAGCGTGCTGCAGCCAACCCGCAAGCGCCCGAGGAGCCAGCTCCAG GTGCAACAGCAGCGGCGGCAACAATGACCGCCCGCCCGGCCGAGCCGGCC GAGCGCCCCTCGCTGGCGGCGGCCAAACCCATCCTCACGCTTGACGGGGT GACCCTGGCCTTCGGCGGCCTCAAGGCGCTTGACGGCGTGAACCTGTCGA TCATGCAGGGGGCCATCCACGGCATCATCGGCCCCAACGGCGCTGGCAAG ACCACGCTTTTCAACGTGATCAACGGTTTCATTCCGCCCGCCACCGGAAC CATCGAGTTCGAGGGCAAGTCGCTGCTTGGCCTGAAGCCGCACCAGGTAT GTTGGCGCGGTGTGGGCCGCACCTTCCAGGTGGTGCGCGCCTTTCCGCGC ATGACCGTGCTCGAGAACGTGATCACCGGCGCCTTCGCCGGCTCCCCCAC CGATGCCGGCGCGCGCGATCTGGCGCACGAGGCGCTGGAGCGGGTGGGGC TGGCCGGGCGGCAGGCTCAGGCCGTCGCCGGCGGGCTCACCACCAAGCAG CTGCGCCTGCTCGAACTGGCGCGTGCGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20341:2..1231+

>mRNA_P-wetherbeei_contig20341.2.1 ID=mRNA_P-wetherbeei_contig20341.2.1|Name=mRNA_P-wetherbeei_contig20341.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig20341:2..1231+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGGCGTCCTGATCGGCATTCCCACTTTCCGCCTGCGCGGCCACTACTT
CGGCCTTTCCATGCTGGCCTATCCGCTGGCCATGCTTTACGTGTTCGAAT
GGCTGGGCTACCAGGAGGTGTCCCTGCCGATGAAGCGCGAGAACCCGGTG
GCGTTCGCGCAGTTCGCCGACCAGCGCATGTACATCCTCCTGGCCATGGC
CTTCCTGATCGTGGCCATGCTGATCTGTCTGAAGGTGGAGGGCTCGCGCT
TCGGTCGATCACTGATGGCCATCAAGCAGAACGAGCCGGCGGCCGAGGCG
GCCGGCATCAACACACTGCGCCAGAAGATGGTGGCCATCATGCTCTCGGC
CGGCATTGCCGCGGCCGCCGGCGGGCTTTATGCAAACGTGCTGCTGGTGG
TGACGCCGCAAACCATGTTCGGCATGCTGATCTCGGCGCAGGCGCTCATC
ATGTCGCTCTTCGGTGGCGTGGGCACTCTGTGGGGGCCGGTGATCGGCGC
GGCCATCCTGGTGCCGCTGGCCGAAATCCTGCATGGCGAGCTGGGCTCGA
TTCTGCCCGGCATACAGGGCGTGGTGTACGGCCTGGCCATCATCATCATC
ATCCTGGTGGCGCCGGAAGGCATCTACTGGCGGGTGCGTGACCATCTGGC
GGCCAAGCGTGCTGCAGCCAACCCGCAAGCGCCCGAGGAGCCAGCTCCAG
GTGCAACAGCAGCGGCGGCAACAATGACCGCCCGCCCGGCCGAGCCGGCC
GAGCGCCCCTCGCTGGCGGCGGCCAAACCCATCCTCACGCTTGACGGGGT
GACCCTGGCCTTCGGCGGCCTCAAGGCGCTTGACGGCGTGAACCTGTCGA
TCATGCAGGGGGCCATCCACGGCATCATCGGCCCCAACGGCGCTGGCAAG
ACCACGCTTTTCAACGTGATCAACGGTTTCATTCCGCCCGCCACCGGAAC
CATCGAGTTCGAGGGCAAGTCGCTGCTTGGCCTGAAGCCGCACCAGGTAT
GTTGGCGCGGTGTGGGCCGCACCTTCCAGGTGGTGCGCGCCTTTCCGCGC
ATGACCGTGCTCGAGAACGTGATCACCGGCGCCTTCGCCGGCTCCCCCAC
CGATGCCGGCGCGCGCGATCTGGCGCACGAGGCGCTGGAGCGGGTGGGGC
TGGCCGGGCGGCAGGCTCAGGCCGTCGCCGGCGGGCTCACCACCAAGCAG
CTGCGCCTGCTCGAACTGGCGCGTGCGCTG
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