mRNA_P-wetherbeei_contig20333.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.950e-41 Identity = 104/329 (31.61%), Postives = 163/329 (49.54%), Query Frame = 1
Query: 16 RLCAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEP-HDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLG--NMTSISGILGM-----VAIVATCAIA---YPAE---------------------------KLRYEIRKGLHYAFVLVFICLFLHSFNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
R C + + L++++R TAG + S AK R + +S+ + FEP H +H FG + +++HS H+ A+ N + SG++ M +A+ T +A P E +L +E+RK LH F+ I + H + + A+ LA Y++D Y T ++ P++ P+G GT V F +P GY++KPG YV VN P IS EWH FSL P V G A F EAVGDWT ++F +++ + P+WI+ A PS+ +KT+ ++ ++L+CTG GITPA+
Sbjct: 251 RACVTSGPEMALITVARLTAGALFPSIIFCVLAKCYATRYLLHHSWLTLIIDFEPSHKLHTYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLLPIALPMTMRLAKAKVPEEVYRSLAPTGFSLPRVVARCFARDNETPQLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFP----VPGP---RPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFENVLLVCTGAGITPAV 572
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU) HSP 1 Score: 155 bits (392), Expect = 3.230e-39 Identity = 100/304 (32.89%), Postives = 157/304 (51.64%), Query Frame = 1
Query: 1 VCPITRLCAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHF-EPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKL--GNMTSISGILGMV---AIVATCAIAYPAEKLRYEIRKGLHYAFVL--VFICLFLHSFNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
+CP +CAE + + LL++SR +A Y + F +K + +R +Q ++ S + F + H IH G I A LHS+ H++R+A+ KL + T +SG+L V I ++AY +++ +E RKGLHY ++ + IC ++ V + Y+ D+ + T VD +F + G ++F P G+ F+ YV V PWIS+++WHAFSL + + A AVGDWTK L + RRP WIS F S +YD ++L+ +GIGITPA+
Sbjct: 61 LCPRETVCAEEWYTIALLAVSRSSAYLNYPMMMLLFLSKTNHLRTLLQQTYLSIYIPFYDLHAIHTLAGHIVALDYSLHSVCHIVRWALQGNAKLLLTHQTGVSGLLCFVLIPVITVPLSVAYIKKRMAWEWRKGLHYLSIVWGITICFHAPLMDIAWLMGVPVGMYLADMLIGSVWRTYRVDTSIFYRLENGVELTFEHPPGFHFQGAGYVLVCLPWISQYQWHAFSLFAHS-------TKPNHACVCMSAVGDWTKSLHAHVQEPTRRPAWISGPFASPYSTAGEYDNLILVASGIGITPAL 357
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL) HSP 1 Score: 143 bits (360), Expect = 1.160e-34 Identity = 101/312 (32.37%), Postives = 164/312 (52.56%), Query Frame = 1
Query: 1 VCPITRLCAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHF-EPHDIHQTFG-WIAAASAILHSIAHVIRYAIYHPRKLGNM----TSISGILGMVAIVATCAIAYPA------EKLRYEIRKGLHYAFVLVFICLFLHSFNVMVFSAVF--LAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQYVYVNAPWISKHEWHAFSLIP-ATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVR-RPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
VCP +CAE + + LL+ISR +A Y + + + +K + +R +Q +F S++ F + H++H T G +I +S HS+ H+IR+ + GN+ T ++G G++A+VA I P +L +E+RKGLH+ + I L H+ V +F +F L Y +D Y ++ +++ F + G + F P+G F+ G YV + PW+++H+WHAFSL TE + V S+ VGDWT L + RP W+ F S +++D I+L+ +GIGITPAI
Sbjct: 84 VCPRDTVCAEEWYTVMLLTISRVSAYHMYPALVLVWASKSNNLRTFLQGTFLSNYIPFYDLHNLHTTLGHFILWSSVFFHSLPHIIRWGLQ-----GNLSFLVTRVTGATGLLAMVAAPCIVLPMLVPALKRRLSWEVRKGLHHLHWVFGIALAFHAPAVNIFWIMFAVLLVYGLDALYGLLLKAYIIETAEFTCLKNGVQLRFVNPEG--FRGGGYVLLCVPWLNRHQWHAFSLFSHPTEPNQSCVHISN--------VGDWTDLLHGSLTERPTCRPCWVQGPFASPYHTALEFDNIILVASGIGITPAI 380
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 139 bits (350), Expect = 1.630e-33 Identity = 91/296 (30.74%), Postives = 141/296 (47.64%), Query Frame = 1
Query: 22 CAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEP-HDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNMTSISGILGMVAIVATCAIAYPA------EKLRYEIRKGLHYAFVLVFICLFLHSFNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
C + + LL++SR +AG S A +K R + +S+ + FEP H++H FG + +LH +AH+ R + S G G +A+V IA P + + +E RK LH F+ + + H + V + + +A Y++D Y F GY+FK G Y+ VN P IS EWH FS+ P V G F+ EAVGDWT++LF S+ P+WI+ A PS+ +K++ ++ ++++CTG GITPAI
Sbjct: 53 CVTSALSKVLLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLALVVSFEPAHELHTYFGSLTLLFGVLHGLAHLAREV--NEGHWNCFASSMGRSGFIALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTY------------------------FTTRIGYQFKVGSYIQVNCPAISAKEWHPFSMFP----VPGP---RPRGGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFENVIMVCTGAGITPAI 315
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A7S2NWW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWW7_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.880e-32 Identity = 91/310 (29.35%), Postives = 151/310 (48.71%), Query Frame = 1
Query: 1 VCPITRLCAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHF-EPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNMTSI-----SGILGMVAIVATCAIAYPA------EKLRYEIRKGLHYAFVLVFICLFLHSFNVMVFSAVFLAAYVIDLAYL--IITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
+CP +CA+ L L I+R + Y F +K + + +Q + FS F F + H +H + + +H H++R+ R GN + +G+ G++A+ I +P ++L YE RKGLHY + + + LH+ +F + + L Y+ I T +V +F +G GTS+SF P G++ K Y+ V PWIS+ +WHAFS+ P +A+S A+GDW+K+L + I+ R +W++ + S I +D I+ + TGIGITPA+
Sbjct: 78 ICPRETVCADRIVDLVYLGIARTSIYMVYPFLICLFLSKSNHLTAYLQTTVFSVFVEFADMHHVHVFGAKVVEYATWIHVFFHLLRWGT---RDNGNELTYLWETQTGLTGLIAVAVMPLITWPMRFERFRKRLSYEYRKGLHYLSWIWMVAMVLHAPATHIFYLCGIPLLIYWLNYIAGIFRGTYLVPSTVFRRLGSGTSLSFINPPGFELKGASYIMVMLPWISRTQWHAFSVFPHP-------TQENASSVCIAALGDWSKQLHETIIRPTSRAVWVNGPYLSPFATAIDFDNIITLATGIGITPAL 377
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A1E7EM55_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EM55_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.330e-30 Identity = 97/306 (31.70%), Postives = 146/306 (47.71%), Query Frame = 1
Query: 25 AETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEPHDIHQTFGWIAAASAILHSIAHVIRYAIY-HPRKLGNMTSISGILGMVAIVATCAIAYPA----EKLRYEIRKGLHYAFVLVFICLFLH---------SFNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYK--FKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFD--ESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
A T + LL ISRF+A Y + + F KL + I + S + H +H GW+ A+LH+ AH+IR+ + + L S +GI P + +++EIRK HY F L+ + L LH F VF + L+ Y ID Y+ ++ + P + + G +S V + ++ K G Y YV PWISKH+WHA+SL E + S F A+A GDWT ++ E + + RP+WI+ FPS + YD ++L+ GIGITPA+
Sbjct: 76 ATTIIEMILLGISRFSAFYSYPAIVLVFWTKLRGLHSIIDKTPLSVLTISDTHKLHAYCGWVMFFDALLHTTAHLIRWGLQGNLYLLATKESRTGIXXXXXXXXXXXXXLPMTVFKKYMKFEIRKYTHYLFWLLALVLSLHVPIQAFPNGGFCGFVFPILMLS-YAIDAMYVKFLMSERITTPSYKVLKAGVELSMPVSERFQKSLKSGGYGYVMLPWISKHQWHAYSLY------ENPLDPSIRHMFLAKA-GDWTSEVHTRIEEVDATARPLWITGPFPSPYNNAYNYDSMILVAAGIGITPAL 373
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A7S2A4J8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4J8_TRICV) HSP 1 Score: 130 bits (326), Expect = 3.370e-30 Identity = 86/298 (28.86%), Postives = 142/298 (47.65%), Query Frame = 1
Query: 25 AETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNMTSI----SGILGMVAIVATCAIAYPA----EKLRYEIRKGLHYAFVLVFICLFLHSFNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKFKPGQ--YVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
AE + L++SR +A + Y + F K + + FS + + H +H G A +H+I HV+R+A G++ + +G G+V +V T I P EK+RYEIRKGLHY F + IC+ H + ++ Y +D+ Y+ + T+ ++ F + G +S V ++ + GQ + YV PW+ +++WHAFSL V F GDWT+ + + ++ RP+W+ F S + YD +L+ +GIGITPA+
Sbjct: 66 AEGNYQKLCLAVSRISAFSMYPVMILVFLTKCKAALTFLSKTPFSMYMTDDTHALHIYAGCFIFWGAFIHAIFHVLRWA-----DQGHIALLWEHQTGFTGVVILVVTPLIVVPMICWKEKIRYEIRKGLHYLFYVFAICMCFHGGYIGYVLGFCISLYSLDMMYITLFMTEKIETTTFQVLSSGVLMSMNVSKSFQKRGGQGGFAYVCLPWVDRNQWHAFSLFEHPSNPSKRQV-------FMLKTGDWTRAVHEALQRNTVRPVWVQGPFVSPYSQAEAYDNQILVASGIGITPAL 351
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A1E7ER18_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER18_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.320e-29 Identity = 88/305 (28.85%), Postives = 146/305 (47.87%), Query Frame = 1
Query: 25 AETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNMTSISGILGMVAIVATCAIAYPA----EKLRYEIRKGLHYAFVLVFICLFLHS---------FNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYK--FKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDE--SIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
A + + LL +SRF+ Y + F KL + I + F F + H +H GW+ + LH+I H+IR+++ K SGI G + I++T I P ++L++EIRK HY F I + H+ F +F + + +Y +D Y+ ++ ++ + + G ++ V ++ G Y Y+ PWI K++WHAFSL + + + F E GDWT KL + S + RP+W+S FPS + I +D ++L+ +GIGITPA+
Sbjct: 128 ASSTIQMLLLGLSRFSRYFMYPAIVCVFWTKLRATQAFIDKTPFRVFCIQDTHRLHVYCGWVIFIDSCLHAIFHLIRWSLQRNLKRLLFNHNSGITGSIVIISTFIIVIPMTILKKQLKFEIRKYAHYFFWTFCIAMSFHASCQAIPNGGFCAFIFP-ILIISYGLDALYVKSFMSERINTVNYKVMQSGVELTMPVSKRFQNGLISGGYGYIMLPWIDKNQWHAFSLYE-------NPLDTSIRHMFIEKRGDWTTKLHRKIKSCSTTSRPVWLSGPFPSPYNNAINFDNMILVASGIGITPAL 424
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: B8CG47_THAPS (FAD-binding FR-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG47_THAPS) HSP 1 Score: 127 bits (318), Expect = 3.640e-29 Identity = 91/304 (29.93%), Postives = 149/304 (49.01%), Query Frame = 1
Query: 40 ALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSFFSDFAHFEPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNM----TSISGILGMVAIVATCAIAYPA--EKLR----YEIRKGLHYAFVLVFICLFLHS---------FNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYK--FKPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
+L L+ISR +A T Y + F K + + S F + H++H G A +H++ H +R+ I GN+ T+I+G+ G++ ++AT I +P LR YE+RKGLHY F L I + H+ FN +V + Y +D Y++I T+M++ +F + G ++ V D ++ + G Y YV PW+SK++WHAFSL V+ GDWT + ++ ++ RP+WIS F S + + +D + + +GIGITPA+
Sbjct: 101 SLIFLAISRISAFTLYPPMFLIFMTKCKATINFLMRTPLSLFMVDDQHELHSFCGKYIAFDVWVHTLFHCLRWGIQ-----GNIDLLWTNITGLSGLIVVLATPLITFPMFINPLRLAMSYEVRKGLHYLFYLFAIGMCFHNKTSAFPNGGFNQVVLGFC-IVYYTLDSLYVMIFMTEMIETTVFNVLPSGVQMTMAVSDHFQKTYAQGGYGYVCLPWVSKYQWHAFSLFEHPTDPNLRQVF-----MMKVQGGDWTNSVHEQLQRNTVRPVWISGPFVSPYNNALDFDNTICVASGIGITPAL 393
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Match: A0A7S1V6H5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6H5_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.170e-29 Identity = 87/264 (32.95%), Postives = 130/264 (49.24%), Query Frame = 1
Query: 154 FSDFAHFEPHDIHQTFGWIAAASAILHSIAHVIRYAIYHPRKLGNM-----TSISGILGMVAIVATCAIAYPA---EKLRYEIRKGLHYAFVLVFICLFLHS---------FNVMVFSAVFLAAYVIDLAYLIITCTQMVDEPMFVPIGGGTSVSFRVPDGYKF--KPGQYVYVNAPWISKHEWHAFSLIPATEFVEGSVVYSDAASFFAEAVGDWTKKLFDESIQSVRRPIWISPAFPSMADKTIKYDKIVLICTGIGITPAI 888
FS F E HD+H G I+H+IAH++R+A GNM T SGI G I + I +P + +R+E+RK HY F + I L H+ F VFS + L ++D Y+ I T+ ++ +F + G ++ V D ++ + G Y YV PWI K++WHAFSL + V F + GDWT + + ++ RPIW+ FPS +I+YD +L+ +GIGITPA+
Sbjct: 13 FSMFMFEELHDLHVYCGTTIVYGGIIHTIAHLLRWA-----DQGNMFHLLFTDRSGISGAFIIASCILICFPMMFWKTIRFELRKFTHYLFYIFVIALCFHAPASAVPNGGFAPYVFSILLLWT-MLDSLYVYIYMTEKIETTVFNVLPTGIQLTMDVSDRFRKSGEQGGYCYVCFPWIDKNQWHAFSLFE-------NPVNPRQRQIFMQKTGDWTTAVHESLTRNTNRPIWVQGPFPSPYSNSIEYDNQLLVASGIGITPAL 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20333.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20333.1.1 >prot_P-wetherbeei_contig20333.1.1 ID=prot_P-wetherbeei_contig20333.1.1|Name=mRNA_P-wetherbeei_contig20333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=298bp VCPITRLCAETPFALFLLSISRFTAGTFYTSAAITFTAKLSLIRIQIQNSback to top mRNA from alignment at P-wetherbeei_contig20333:1..894- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20333.1.1 ID=mRNA_P-wetherbeei_contig20333.1.1|Name=mRNA_P-wetherbeei_contig20333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=894bp|location=Sequence derived from alignment at P-wetherbeei_contig20333:1..894- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20333:1..894- >mRNA_P-wetherbeei_contig20333.1.1 ID=mRNA_P-wetherbeei_contig20333.1.1|Name=mRNA_P-wetherbeei_contig20333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=894bp|location=Sequence derived from alignment at P-wetherbeei_contig20333:1..894- (Phaeothamnion wetherbeei SAG_119_79)back to top |