mRNA_P-wetherbeei_contig20293.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A3C0TYY4_9PROT (Flagellar basal body rod protein FlgB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYY4_9PROT) HSP 1 Score: 107 bits (266), Expect = 2.910e-28 Identity = 47/70 (67.14%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTSQIAMTNPLHLKG 210
ME APLFAA+R +MEWLSERQK+L+ENIANADTPG++ARDLKPVDF + LK + +++A+TNP+H+KG
Sbjct: 1 MELNKAPLFAAMRAKMEWLSERQKILAENIANADTPGFKARDLKPVDFTEYLKNHAATELALTNPMHIKG 70
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A352KGW1_9PROT (Flagellar basal body rod protein FlgB n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGW1_9PROT) HSP 1 Score: 82.4 bits (202), Expect = 1.560e-18 Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLK-RGSTSQIAMTNPLHLKG 210
M A P+F+A+R ++ WLS RQK++SENIANA+TPG++AR+LKPVDF K+L+ +G + +TN H+ G
Sbjct: 1 MSANAFPIFSAIRTKLAWLSARQKVVSENIANANTPGFRARELKPVDFRKMLENQGQMVGLRVTNARHMSG 71
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A537KVL9_9PROT (Flagellar basal body rod protein FlgB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KVL9_9PROT) HSP 1 Score: 77.8 bits (190), Expect = 9.670e-17 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTS-QIAMTNPLHL 204
M P+F+ LR RM W ERQ+LL+EN+ANADTP Y+ RDL P+DF K +++ S Q+A+T+P HL
Sbjct: 1 MAISDLPIFSMLRTRMNWHQERQRLLAENVANADTPAYRPRDLAPLDFGKQVQQASGQLQLALTSPAHL 69
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A2A5ETZ6_9HYPH (Flagellar basal body rod protein FlgB n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ETZ6_9HYPH) HSP 1 Score: 77.8 bits (190), Expect = 1.040e-16 Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 16 APLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTSQIAM----TNPLHLKG 210
+P+F+ ++ RM WL++RQ++++EN+ANADTP Y A+DL DF +L+RGS+S + TNPLHL+G
Sbjct: 6 SPIFSMMKERMHWLADRQRVIAENVANADTPNYIAKDLAEPDFSAMLRRGSSSASVLSAVQTNPLHLRG 74
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A7V9S9X0_9PROT (Flagellar basal body rod protein FlgB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7V9S9X0_9PROT) HSP 1 Score: 77.0 bits (188), Expect = 1.850e-16 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKR-GSTSQIAMTNPLHL 204
M PL + LR RM WL++RQ LLS+N+ANADTPGY A+DLK +DF K L++ GS+S + TN H+
Sbjct: 1 MNLPDVPLLSKLRERMTWLNQRQDLLSQNVANADTPGYVAKDLKALDFDKALRQSGSSSSMLTTNSRHI 69
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A522A7I5_9PROT (Flagellar basal body rod protein FlgB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A522A7I5_9PROT) HSP 1 Score: 77.0 bits (188), Expect = 2.090e-16 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTS---QIAMTNPLHLKG 210
M+ LF +M+W S+RQK+LS+N+ANADTP Y+ARDLK +DF K+L+ G+T ++A TNP+HL G
Sbjct: 1 MDLDNLTLFKMAMTKMDWASQRQKVLSQNVANADTPDYKARDLKKLDFKKILE-GTTPAPVKVAQTNPMHLPG 72
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A8I1RNW9_9PROT (Flagellar basal body rod protein FlgB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RNW9_9PROT) HSP 1 Score: 77.0 bits (188), Expect = 2.140e-16 Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKR----GST-SQIAMTNPLHL 204
M+ PLF LR RM WL+ RQ +LS N+ANADTPGY ARD+KP+DF LLKR G+T + +T+P H+
Sbjct: 1 MQLSSIPLFDVLRERMAWLNTRQNVLSTNVANADTPGYGARDIKPMDFAALLKRAAGTGATPGALTVTDPHHI 73
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: UPI0004711BC9 (flagellar basal body rod protein FlgB n=1 Tax=Sneathiella glossodoripedis TaxID=418853 RepID=UPI0004711BC9) HSP 1 Score: 76.3 bits (186), Expect = 3.890e-16 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGS--TSQIAMTNPLHL 204
M K PL +AL RM+WLS+RQ +LS+NIAN+DTPGYQA DLKP F ++KR S T +A T+ H+
Sbjct: 1 MSLKNIPLLSALTERMKWLSQRQSVLSQNIANSDTPGYQASDLKPQKFKDMVKRPSEVTMNLAKTSEGHI 70
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: A0A2E5BRP8_9HYPH (Flagellar basal body rod protein FlgB n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BRP8_9HYPH) HSP 1 Score: 75.9 bits (185), Expect = 5.780e-16 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 16 APLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTS---QIAMTNPLHL 204
+P+F+ ++ RM WL+ERQ+++SEN+ANADTP Y ARDLK DF LL R TS Q A T+P H+
Sbjct: 6 SPIFSMMKERMHWLAERQRVISENVANADTPNYVARDLKEPDFXTLLTRRRTSNLLQAAKTDPAHI 71
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Match: UPI00146AFF58 (flagellar basal body rod protein FlgB n=1 Tax=Sneathiella limimaris TaxID=1964213 RepID=UPI00146AFF58) HSP 1 Score: 75.5 bits (184), Expect = 7.790e-16 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 1 MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKLLKRGSTSQIAMTN 192
M K PLF+AL RM+WLS+RQ +LS+NIAN+DTPGY+A DLKP F L+K +++ M +
Sbjct: 1 MSLKSIPLFSALTERMKWLSQRQSVLSQNIANSDTPGYRASDLKPQSFEDLVKGSKEAKVYMAS 64 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20293.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20293.3.1 >prot_P-wetherbeei_contig20293.3.1 ID=prot_P-wetherbeei_contig20293.3.1|Name=mRNA_P-wetherbeei_contig20293.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=70bp MEAKGAPLFAALRVRMEWLSERQKLLSENIANADTPGYQARDLKPVDFHKback to top mRNA from alignment at P-wetherbeei_contig20293:1023..1232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20293.3.1 ID=mRNA_P-wetherbeei_contig20293.3.1|Name=mRNA_P-wetherbeei_contig20293.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig20293:1023..1232+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20293:1023..1232+ >mRNA_P-wetherbeei_contig20293.3.1 ID=mRNA_P-wetherbeei_contig20293.3.1|Name=mRNA_P-wetherbeei_contig20293.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig20293:1023..1232+ (Phaeothamnion wetherbeei SAG_119_79)back to top |