mRNA_P-wetherbeei_contig20265.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20265.1.1
Unique NamemRNA_P-wetherbeei_contig20265.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A7C4TU78_9HYPH (FAD-dependent tricarballylate dehydrogenase TcuA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TU78_9HYPH)

HSP 1 Score: 394 bits (1011), Expect = 5.260e-133
Identity = 196/285 (68.77%), Postives = 222/285 (77.89%), Query Frame = 1
Query:    7 YDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            YD+LV GGGNA L AAI+A+R G   +LVLEAAP   R GNSRHTRNFRCMH AP   + EAY E+EYWEDL RVT G+TNE LARM IR SEG   WM+EQG RFQPALGGTLQLSRT AF+LGGGKAL+NAYYRTAE+LG+   YDAEVI + I + RF  A  K  G+ T   AR +V AAGGFESN  WL + WGP A NFL RGT YN+GTCLK++L  GAKS+GDP Q H VAIDAR PK+DGGI TRVD+V+ GIVVN+E +RFYDEGEDFWPKRYAI
Sbjct:   10 YDVLVAGGGNAGLCAAITARRRGAS-VLVLEAAPKDYRAGNSRHTRNFRCMHRAPTAVLTEAYCEDEYWEDLKRVTAGKTNEGLARMTIRASEGCLEWMQEQGARFQPALGGTLQLSRTNAFFLGGGKALMNAYYRTAEQLGVHIAYDAEVIGLDIRDRRFCGARVKIDGAETKAGARTLVLAAGGFESNIGWLRQAWGPAADNFLIRGTPYNLGTCLKLMLDAGAKSVGDPRQCHAVAIDARGPKFDGGIVTRVDSVTLGIVVNREGRRFYDEGEDFWPKRYAI 293          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A6M4GT02_9PROT (Fumarate reductase flavoprotein subunit n=2 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GT02_9PROT)

HSP 1 Score: 390 bits (1001), Expect = 1.370e-131
Identity = 189/285 (66.32%), Postives = 221/285 (77.54%), Query Frame = 1
Query:    7 YDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            YDILV+GGGNAAL A + A+  G   + ++E AP H RGGNSRHTRN R MH AP + + + YPEEEYW+DLL+VTGGQT+E+LARMAIR + G   WM + GVRFQPALGGTL +SRT AF+LGGGKAL+NAYYR+A+ LG+E  YD EVID+ +  G F +AT  R G+   I A+AVV A GGFESN EWL + WGP A NF+ RGT YN G  LK L+A GAKSIGDPTQGH VAIDAR+PK+DGGI TRVD VS GIVVNK  +RFYDEGEDFWPKRYAI
Sbjct:    3 YDILVLGGGNAALCATLMAREAGAT-VRLVEWAPQHFRGGNSRHTRNIRSMHDAPADVLTDTYPEEEYWQDLLKVTGGQTDEKLARMAIRHTAGCRPWMSKHGVRFQPALGGTLHVSRTNAFFLGGGKALMNAYYRSAQALGVEVTYDTEVIDLEMEGGTFRSATVIRNGAEEKIHAKAVVIACGGFESNLEWLREAWGPPADNFIVRGTPYNTGRVLKALIAKGAKSIGDPTQGHCVAIDARSPKFDGGIVTRVDCVSLGIVVNKHGERFYDEGEDFWPKRYAI 286          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A536UZ59_9PROT (FAD-dependent tricarballylate dehydrogenase TcuA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536UZ59_9PROT)

HSP 1 Score: 387 bits (994), Expect = 1.740e-130
Identity = 186/287 (64.81%), Postives = 223/287 (77.70%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            + YD+L++GGGNAAL AAI+A+R G   + +LE AP H RGGNSRHTRNFRCMH AP + + + YPEEEYW+DLL+VTGG+TNE+LAR+ IR +     WM E GVRFQP+LGGTL +SRT AF+LGGGKAL+NAYYR AE LG+E  YD EV D+ I +GRF +A   R+G    + A+ VV AAGGFE+N  WL + WGP A NFL RGT YN+G  L++LL  GAKSIGD TQGH VAIDAR+PK+DGGI TRVD VS G+VVN+ A RFYDEGEDFWPKRYAI
Sbjct:    5 RTYDVLILGGGNAALCAAITARRAG-RSVALLECAPKHFRGGNSRHTRNFRCMHDAPSDGLTDTYPEEEYWQDLLKVTGGETNEKLARITIRFTATCRKWMAEHGVRFQPSLGGTLHVSRTNAFFLGGGKALINAYYRAAEALGVEISYDTEVTDLNIDDGRFMSALAVRHGIEQEVRAKTVVAAAGGFEANLAWLREAWGPAADNFLVRGTPYNVGRVLRILLDKGAKSIGDATQGHCVAIDARSPKFDGGICTRVDCVSLGVVVNESAYRFYDEGEDFWPKRYAI 290          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A536YJZ6_9PROT (FAD-dependent tricarballylate dehydrogenase TcuA n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YJZ6_9PROT)

HSP 1 Score: 386 bits (991), Expect = 5.450e-130
Identity = 191/285 (67.02%), Postives = 220/285 (77.19%), Query Frame = 1
Query:    7 YDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            YD+LV+GGGNAAL AAI+A+R G   +L+LE AP H RGGNSRHTRN RCMH +P + + +AY EEEYW DLL+VTGG+TNEQLAR+ IR +     WM   GVRFQP+LGGTL LSRT AF+LGGGKALLNAYYR AE LG+E  YD  V ++ I +GRF +A   R G    I A+ VV AAGGFESN  WL++ WGP A NFL RGT YNMG  L++LL NGAKSIGDP QGH VAIDAR+PK+DGGI TRVD VS GIVVN+ A RFYDEGEDFWPKRYAI
Sbjct:    2 YDVLVLGGGNAALCAAITARRAG-RSVLLLECAPRHFRGGNSRHTRNLRCMHDSPADVLTDAYREEEYWHDLLQVTGGETNEQLARITIRHTATCRDWMLGNGVRFQPSLGGTLHLSRTNAFFLGGGKALLNAYYRAAEALGVEITYDTAVTNLNIKDGRFTSAIAVRDGVEHEIRAKTVVAAAGGFESNLAWLKEAWGPAADNFLVRGTPYNMGRVLRILLDNGAKSIGDPAQGHCVAIDARSPKFDGGICTRVDCVSLGIVVNENALRFYDEGEDFWPKRYAI 285          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: UPI001C079C30 (FAD-dependent tricarballylate dehydrogenase TcuA n=2 Tax=Geomonas propionica TaxID=2798582 RepID=UPI001C079C30)

HSP 1 Score: 385 bits (988), Expect = 1.460e-129
Identity = 186/287 (64.81%), Postives = 227/287 (79.09%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            K YD+LVIGGGNAAL AAISA+R G   +LVLE+AP   RGGNSRHTRN RCMH AP+  + +AY EEEYWED ++VTGG TNE LARMAIR+SE    WM +QG+RFQP+LGGTL LSRT AF+LGGGKAL+NA YRTAE LG+E  Y +EV ++ I++GRF +A + R G    + A+A+V A+GGF++N  WL+K WG  A+NF+ RGT Y+ G  L++L+  GAK++GDPTQ H VAIDARAP++DGGI TRVD VS GIVVNK A+RFYDEGEDFWPKRYAI
Sbjct:    5 KIYDVLVIGGGNAALCAAISARRSGAS-VLVLESAPKDFRGGNSRHTRNLRCMHKAPMAVLTDAYTEEEYWEDFMKVTGGMTNEPLARMAIRQSETCMQWMMQQGIRFQPSLGGTLHLSRTNAFFLGGGKALVNALYRTAESLGVEIEYGSEVRELKITDGRFTSALFSRRGFSHEVRAKALVAASGGFQANIPWLKKAWGDVAENFIIRGTPYSNGNILRLLMEQGAKTVGDPTQCHAVAIDARAPRFDGGIITRVDCVSLGIVVNKNAQRFYDEGEDFWPKRYAI 290          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A536T0S4_9PROT (FAD-dependent tricarballylate dehydrogenase TcuA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536T0S4_9PROT)

HSP 1 Score: 382 bits (980), Expect = 2.370e-128
Identity = 187/287 (65.16%), Postives = 218/287 (75.96%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            + YD+LV+GGGNAAL AAI   + G   +LVLEAAP H RGGNSRHTRN RC+H AP + +  AYPE+EYW+DLL VTGGQTNE LARM IR +     WM  QGVRFQP LGGTLQL+RT AF+LGGGKAL+NAYYRTAE LG++  YD EV D+ + +G F +A     G    I+A+AVV AAGGFESN  WL K WG  A NFL RGT YNMG  L++LL  GAKS+GDP QGH VAIDAR+PK+DGGI TRVD VS GIVVN++A+RF DEG DFWPKRYA+
Sbjct:    5 RSYDVLVLGGGNAALCAAIETAQAG-RSVLVLEAAPKHFRGGNSRHTRNVRCVHDAPADVLSGAYPEDEYWQDLLEVTGGQTNEALARMTIRHTATCREWMIRQGVRFQPPLGGTLQLARTNAFFLGGGKALINAYYRTAERLGVDIAYDTEVADLNLRDGEFTSAIVVHQGVQHVIQAKAVVAAAGGFESNVAWLRKTWGSAADNFLIRGTPYNMGRVLRVLLDGGAKSVGDPAQGHYVAIDARSPKFDGGICTRVDCVSLGIVVNRDAQRFDDEGLDFWPKRYAV 290          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A351WXU0_9DELT (Tricarballylate dehydrogenase n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A351WXU0_9DELT)

HSP 1 Score: 380 bits (975), Expect = 1.150e-127
Identity = 185/285 (64.91%), Postives = 223/285 (78.25%), Query Frame = 1
Query:    7 YDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            YD+L++GGGNAAL AAI+A+R G   +LVLE AP   RGGNSRHTRN RCMH  P + + +AY E EYWEDLL+VTGGQTNE+LARMAIR S     WM + GVRFQP+LGGTL LSRT AF+LGGGKAL+NAYYR+AE LG++  Y++EV ++ I +G+F +A + R G    I A+A++ AAGGF+SN  WL++ WG  A NF+ RGT Y+ GT LKML+  G K+IGDPTQ H VAIDARAPK+DGGI TRVD VS GIVVN+ AKRFYDEGEDFWPKRYAI
Sbjct:    2 YDVLIVGGGNAALCAAITARRNGCS-VLVLEGAPKEFRGGNSRHTRNLRCMHDGPADVLTDAYTEREYWEDLLKVTGGQTNEKLARMAIRDSAHCRKWMVQHGVRFQPSLGGTLHLSRTNAFFLGGGKALVNAYYRSAELLGVDIEYNSEVRELKIQDGKFTSAVFVRKGFTHEIRAKALIAAAGGFQSNVAWLKQAWGDAADNFIIRGTPYDKGTVLKMLMEQGVKTIGDPTQCHAVAIDARAPKFDGGIITRVDCVSLGIVVNRYAKRFYDEGEDFWPKRYAI 285          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A1P8FQ79_9PROT (FAD-binding dehydrogenase n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FQ79_9PROT)

HSP 1 Score: 378 bits (971), Expect = 5.120e-127
Identity = 187/287 (65.16%), Postives = 219/287 (76.31%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            +  ++LV+GGGNA L AA+ A+  G   +LV E AP   RGGNSRHTRN R MH AP ET+ EAYPEEEYW+DLL+VTGG+T+E LAR+ IR ++    WM   GVRFQ ALGGTL +SRT AF+LGGGKALLNAYYR+A  LGIE  YD EV+DV      F +AT ++ G+   IEARAVV A GGFESN  WL + WGP A NF+ RGT YNMG  LK L+A GA+SIGDPTQGH VAIDAR+PK+DGGI TRVD VS GIVVN++A+RFYDEGEDFWPKRYAI
Sbjct:    3 RNCEVLVLGGGNAGLCAALMAREAGASVVLV-EWAPPAYRGGNSRHTRNIRSMHAAPTETLTEAYPEEEYWQDLLKVTGGRTDEALARLTIRHTDSCRPWMARHGVRFQKALGGTLHVSRTNAFFLGGGKALLNAYYRSAAALGIEIHYDTEVLDVNFEGPVFKSATVRKDGAEHVIEARAVVAACGGFESNLAWLREAWGPPADNFIVRGTPYNMGRILKQLIAKGARSIGDPTQGHCVAIDARSPKFDGGIVTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAI 288          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: A0A536UA55_9PROT (FAD-dependent tricarballylate dehydrogenase TcuA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536UA55_9PROT)

HSP 1 Score: 376 bits (966), Expect = 3.120e-126
Identity = 184/287 (64.11%), Postives = 220/287 (76.66%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            + YD+L++GGGNAAL AAI+A +   + +LVLE AP H RGGNSRHTRN RCMH +  + +  +YPE EYW+DLL+VTGGQTNE+LAR+ IR +     WM   GVRFQP LGGTLQL+RT AF+LGGGKALLNAYYRTA  LG+E  YDAEVI++ I +G+F +A     G+   I A+AVV AAGGFESN  WL + WGP A NFL RGT YNMG  L++LL  GAKS+GD  QGH VAIDARAPK+DGGI TRVD VS GIVVN++A+RF DEG DFWPKRYA+
Sbjct:    5 RTYDVLILGGGNAALCAAITAAQAD-KSVLVLECAPKHFRGGNSRHTRNLRCMHDSAADVLSGSYPENEYWQDLLKVTGGQTNEKLARLTIRHTATCREWMIRHGVRFQPPLGGTLQLARTNAFFLGGGKALLNAYYRTAGALGVEVAYDAEVIELDIRDGKFTSAIVAHQGARLEIRAKAVVAAAGGFESNLAWLREAWGPAADNFLIRGTPYNMGRVLRILLDGGAKSVGDAAQGHCVAIDARAPKFDGGICTRVDCVSLGIVVNRDAQRFDDEGLDFWPKRYAV 290          
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Match: V4RHC8_9HYPH (TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4RHC8_9HYPH)

HSP 1 Score: 376 bits (966), Expect = 4.430e-126
Identity = 185/287 (64.46%), Postives = 225/287 (78.40%), Query Frame = 1
Query:    1 KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNFRCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAWMKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYDAEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEWGPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWDGGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI 861
            ++YD+LV+GGGNAAL AAI+A+R G E +LV+EAAP   RGGN+RHTRN RC H    E +   YPEEE+W+DLLRVTGG+T+E+LA+  IR+S+  + +M EQGVRFQP+LGGTL L RT AF+LGGG+AL+NA Y TAE+LGIE LYDAEV D+ I +G F+ A     G    +EA+A+V AAGGFE+N EWL + WGP A+NFL RGT YN G+ L+MLL  G K IGDP Q H VAIDARAPK+DGGISTR+D V FGIVVN+ A+RFYDEGEDFWPKRYAI
Sbjct:   16 RRYDVLVVGGGNAALCAAINARRGGAE-VLVVEAAPRFYRGGNTRHTRNLRCAHDEANEVLTGPYPEEEFWDDLLRVTGGETDEELAKFTIRESKELWDFMNEQGVRFQPSLGGTLSLGRTNAFFLGGGRALINALYLTAEKLGIEVLYDAEVTDLEIEDGFFSAAAVSYAGREHRVEAKALVAAAGGFEANIEWLTEAWGPEAENFLIRGTPYNKGSMLRMLLDRGVKQIGDPKQCHAVAIDARAPKFDGGISTRLDCVVFGIVVNRNAERFYDEGEDFWPKRYAI 301          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TU78_9HYPH5.260e-13368.77FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
A0A6M4GT02_9PROT1.370e-13166.32Fumarate reductase flavoprotein subunit n=2 Tax=Us... [more]
A0A536UZ59_9PROT1.740e-13064.81FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
A0A536YJZ6_9PROT5.450e-13067.02FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
UPI001C079C301.460e-12964.81FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
A0A536T0S4_9PROT2.370e-12865.16FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
A0A351WXU0_9DELT1.150e-12764.91Tricarballylate dehydrogenase n=1 Tax=Geobacter sp... [more]
A0A1P8FQ79_9PROT5.120e-12765.16FAD-binding dehydrogenase n=1 Tax=Betaproteobacter... [more]
A0A536UA55_9PROT3.120e-12664.11FAD-dependent tricarballylate dehydrogenase TcuA n... [more]
V4RHC8_9HYPH4.430e-12664.46TcuA: flavoprotein used to oxidize tricarballylate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20265contigP-wetherbeei_contig20265:2..862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog631454.N177_1638
Preferred namecobZ
PFAMsFAD_binding_2
Model size861
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K13796
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.26e-127
EggNOG OGsCOG1053@1|root,COG1053@2|Bacteria,1MX5A@1224|Proteobacteria,2TV7T@28211|Alphaproteobacteria
DescriptionCOG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit
Cds size861
COG categoryC
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186195.0724308-CDS-P-wetherbeei_contig20265:1..8621683186195.0724308-CDS-P-wetherbeei_contig20265:1..862Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20265 2..862 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20265.1.1prot_P-wetherbeei_contig20265.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20265 2..862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20265.1.1

>prot_P-wetherbeei_contig20265.1.1 ID=prot_P-wetherbeei_contig20265.1.1|Name=mRNA_P-wetherbeei_contig20265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp
KKYDILVIGGGNAALAAAISAKRLGVERILVLEAAPVHLRGGNSRHTRNF
RCMHTAPLETMVEAYPEEEYWEDLLRVTGGQTNEQLARMAIRKSEGTYAW
MKEQGVRFQPALGGTLQLSRTAAFYLGGGKALLNAYYRTAEELGIEALYD
AEVIDVGISNGRFNTATYKRYGSLTTIEARAVVFAAGGFESNFEWLEKEW
GPTAKNFLCRGTAYNMGTCLKMLLANGAKSIGDPTQGHMVAIDARAPKWD
GGISTRVDAVSFGIVVNKEAKRFYDEGEDFWPKRYAI
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mRNA from alignment at P-wetherbeei_contig20265:2..862-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20265.1.1 ID=mRNA_P-wetherbeei_contig20265.1.1|Name=mRNA_P-wetherbeei_contig20265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig20265:2..862- (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGTACGATATTCTCGTCATCGGCGGCGGCAACGCGGCACTCGCCGC GGCGATCAGCGCCAAGCGCCTCGGCGTCGAGCGCATACTGGTGCTCGAGG CAGCCCCTGTCCATCTGCGCGGCGGCAACTCGCGCCACACCCGCAATTTC CGCTGCATGCATACGGCCCCCCTCGAGACGATGGTGGAAGCCTACCCGGA GGAGGAATACTGGGAGGATCTGCTGCGCGTGACCGGCGGGCAGACCAACG AGCAGTTGGCGCGCATGGCGATCCGCAAGTCCGAGGGCACCTACGCCTGG ATGAAGGAGCAGGGCGTGCGCTTCCAGCCAGCTCTCGGCGGCACCTTGCA GCTGTCGCGTACGGCAGCGTTCTATCTCGGCGGCGGCAAGGCGTTGCTCA ACGCCTACTATCGCACGGCGGAAGAACTCGGCATCGAGGCCCTCTATGAC GCGGAAGTGATCGACGTCGGCATCTCGAATGGCCGCTTCAATACCGCGAC CTACAAGCGCTACGGATCGCTGACGACGATCGAGGCGCGCGCCGTGGTGT TCGCCGCCGGCGGCTTTGAATCGAACTTCGAGTGGCTCGAGAAGGAGTGG GGCCCGACGGCGAAGAACTTCCTCTGCCGCGGCACCGCCTACAACATGGG TACGTGCCTCAAGATGCTGCTCGCCAACGGCGCGAAATCGATCGGCGATC CGACCCAGGGCCACATGGTGGCGATCGACGCCCGCGCGCCCAAGTGGGAC GGCGGGATTTCGACGCGCGTCGATGCCGTATCGTTCGGCATCGTCGTCAA CAAGGAGGCCAAGCGCTTCTACGACGAAGGCGAGGACTTCTGGCCCAAGC GCTACGCGATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20265:2..862-

>mRNA_P-wetherbeei_contig20265.1.1 ID=mRNA_P-wetherbeei_contig20265.1.1|Name=mRNA_P-wetherbeei_contig20265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig20265:2..862- (Phaeothamnion wetherbeei SAG_119_79)
AAGAAGTACGATATTCTCGTCATCGGCGGCGGCAACGCGGCACTCGCCGC
GGCGATCAGCGCCAAGCGCCTCGGCGTCGAGCGCATACTGGTGCTCGAGG
CAGCCCCTGTCCATCTGCGCGGCGGCAACTCGCGCCACACCCGCAATTTC
CGCTGCATGCATACGGCCCCCCTCGAGACGATGGTGGAAGCCTACCCGGA
GGAGGAATACTGGGAGGATCTGCTGCGCGTGACCGGCGGGCAGACCAACG
AGCAGTTGGCGCGCATGGCGATCCGCAAGTCCGAGGGCACCTACGCCTGG
ATGAAGGAGCAGGGCGTGCGCTTCCAGCCAGCTCTCGGCGGCACCTTGCA
GCTGTCGCGTACGGCAGCGTTCTATCTCGGCGGCGGCAAGGCGTTGCTCA
ACGCCTACTATCGCACGGCGGAAGAACTCGGCATCGAGGCCCTCTATGAC
GCGGAAGTGATCGACGTCGGCATCTCGAATGGCCGCTTCAATACCGCGAC
CTACAAGCGCTACGGATCGCTGACGACGATCGAGGCGCGCGCCGTGGTGT
TCGCCGCCGGCGGCTTTGAATCGAACTTCGAGTGGCTCGAGAAGGAGTGG
GGCCCGACGGCGAAGAACTTCCTCTGCCGCGGCACCGCCTACAACATGGG
TACGTGCCTCAAGATGCTGCTCGCCAACGGCGCGAAATCGATCGGCGATC
CGACCCAGGGCCACATGGTGGCGATCGACGCCCGCGCGCCCAAGTGGGAC
GGCGGGATTTCGACGCGCGTCGATGCCGTATCGTTCGGCATCGTCGTCAA
CAAGGAGGCCAAGCGCTTCTACGACGAAGGCGAGGACTTCTGGCCCAAGC
GCTACGCGATC
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