mRNA_P-wetherbeei_contig2024.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: D8LBL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL1_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.830e-53 Identity = 121/303 (39.93%), Postives = 168/303 (55.45%), Query Frame = 1
Query: 310 ESIVQHNIDVVRESSPKLWEAMQLKQRLVRWEMQTAKLNLLEQAALPPPAVREMASTAAALRVLCEEETISEGDIAAAFHRATWDATAEARDHRHAYGGLPADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLV------------QSDFLAFQDPG--SGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASP 1176
E ++ ++D ++ + P +WEA++LK+RL W+ QT LN+L+ + LPP V+EM A +R L EE I++ + ATWDA+A +D R LP A+ M+ + + S AAG R++DVG GTGIL+ FL+ GV+ E VGV LS+ M+ VAS+ +P AT + Q+DFL + SGG EGF +FFN CLHNF++P AL AA +L GG+IVISHPKGA V QR NP+L PN +PTA L++ CGA P
Sbjct: 103 EESIRRSMDKLKTAQPFVWEALELKKRLALWQAQTVGLNILQLSELPPRQVQEMKDAEAQVRRLQEEHGITDRLLHNIAQEATWDASARVKDERQVNVQLPPSAVEHMQAVVQR--SEAAGDSRVMDVGAGTGILLRFLQGAGVKQEKYVGVYLSSVMIDVASKRYPHATFLKRKENSKTRTPNQADFLDYCGDHLLSGG----------------------------EGFSHVFFNGCLHNFLEPGEALSDAAKLLKEGGKIVISHPKGAANVDMQRRSNPLLVPNRLPTAADLQKACGAIP 375
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A835YK28_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK28_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.230e-39 Identity = 120/314 (38.22%), Postives = 160/314 (50.96%), Query Frame = 1
Query: 346 ESSPKLWEAMQLKQRLVRWEMQTAKLNLLEQAALPPPAVREMASTAAALRVLCEEETISEGDIAAAFHRATWDATAEAR--DHRHAYGGLPADALRRMRDIARAGVS-TAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQ---------------------DPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASPVMAGLLVVVPEAV 1215
++ P+L A+QL Q L +WE +T L++L+QAAL V + L L ISE IAAAF +ATWDA A R HR A LPA A+ M I+ A V A +++LD+G GTG+L+ F + GVR N+VG+DLSA ML A +P A ++++F+ + DP SG A A A + FD + FN LH+ D AAL RAA +L AGGR+VISHPKG V +Q HN +L P+ MPTA EL +P + GL V E+V
Sbjct: 106 KTDPQLHRAVQLTQALNQWEARTRGLSILQQAALDVRDVNLIKDMKEELNELLRAG-ISELSIAAAFQQATWDAVASTRADGHRRAEEQLPASAVSIMARISDAIVGGRPAEDLKVLDIGTGTGVLIRFARKAGVREANVVGLDLSAAMLAEARATYPRAAFLRANFMTWDGALPPXXXXXXXXXTTSTLKFDPASG---TAAAGASPLADAAAPTSTLKCDHTSTLKFDTVCFNAVLHHLPDARAALARAAALLRAGGRVVISHPKGGGSVAKQHRHNTLLVPSLMPTAA---ELAAMAPAL-GLKFVPEESV 411
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A6H5KG60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG60_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.380e-38 Identity = 88/201 (43.78%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 580 RDHRHAYGGLPADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAF--QDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASP 1176
+D R A LP A+ M+ + + S AAG R++DVG GTGIL+ FL+ GV+ E VGVDLS+ M+ VAS+ +P AT +++DFL + SGG EGF +FFN CLHNF++P AL AA +L GG+IVISHPKGA V+ QR NP+L PN +PTA L + CGA P
Sbjct: 8 KDERQANVQLPPSAVEHMQAVVQR--SEAAGDSRVMDVGAGTGILLRFLQGAGVKQEKYVGVDLSSVMVDVASKRYPHATFLKADFLDYCGDHLSSGG----------------------------EGFSHVFFNGCLHNFLEPGEALSGAAKLLKEGGKIVISHPKGAANVNMQRRSNPLLVPNRLPTAADLEKACGAIP 178
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A6T8HIL0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HIL0_9STRA) HSP 1 Score: 124 bits (311), Expect = 6.140e-29 Identity = 91/269 (33.83%), Postives = 127/269 (47.21%), Query Frame = 1
Query: 367 EAMQLKQRLVRWEMQTAKLNLLEQAALPPPAVREMASTAAALRVLCEEETISEGDIAAAFHRATWDATAEARDHRHAYGGLPADALRRMRDI---ARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGAT-LVQSDFLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALREL 1161
EAM L + +W++ L++L +A++PP A L L +++ D+ F R WDA+A+AR R L D R+ D A V TA RILDVGCGTG L+ LE G+ IVGVD+S +M+RVA + G V SDFL F D FD + F L + DP AL +AA ++ GRIVI+HP+GA V QR +N ++ PN +PT L+++
Sbjct: 2 EAMTLYEDETQWQISIRDLDVLTEASIPPNLFEASKRRVARLEELQNRGIVTQRDVHNGFQRVIWDASADARGFRSG-AELSGDMQTRLNDALVTAAVPVLTAGKDGRILDVGCGTGSLVPELERAGIGRGQIVGVDISNDMVRVALEKYGGRVRFVASDFLEFDDELK--------------------------------FDTVLFGMSLQDLPDPTEALNKAATLVKPNGRIVIAHPQGASHVLMQRRNNILMVPNALPTLEDLKDM 237
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A7S1FWZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWZ0_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.070e-24 Identity = 105/363 (28.93%), Postives = 166/363 (45.73%), Query Frame = 1
Query: 133 PRVLMAKRG-----GSGFGGERRNG------DVPRSRNKRKEREMSFLGRSADSETAAPSRRAETTSGGLESIVQHNIDVVRE----SSPKLWEAMQLKQRLVRWEMQTAKLNLLEQAALPPPAVREMASTAAALRVLCEEETISEGDIAAAFHRATWDATAEARDHRHAYGGLPADALRRMR---DIARAGVSTAAGRVRILDVGCGTGILM-TFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELC 1164
P VL A +G GSG G E+ G +V +N ++ +A+S +R + G ++ I + R S+P L EAM L ++ + L+++++A +P A L + EE ++ +I AF TWDA+AEAR R + LP + R+ +A +S+ GR +LDVGCGTG+ + + + P+ +VG+D+S M VASR + + V SDF+ + +G F+++ F LH+ DPVAA+ +A + GGRIVI+HP+GA V Q NPI+ N++P A L +C
Sbjct: 72 PVVLSAGKGFGSRSGSGGGFEKSTGSASKXXNVSTKKNSAASPPLNSFQAAANSNPKEAARILKLYGGDIQKGTVERIKIARSELERSNPALGEAMNLYEQSTMFRRSVEGLSVMQEAEVPVEAWEMENRRERRLVEIHEEFGVTTTEIHNAFQLLTWDASAEARGFRGS-AELPKNMSERLGLALSLATERISSKEGR--LLDVGCGTGVTVGEIIARNLLAPKQVVGLDISPEMTAVASRKYTRSAFVASDFMDYSVEENG------------------------------SFESVLFCMSLHDLPDPVAAITQAISLCNRGGRIVITHPRGASHVQMQNRKNPIMVRNQLPDATQLGAIC 401
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A7S0Q0Z8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q0Z8_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 1.380e-17 Identity = 75/229 (32.75%), Postives = 105/229 (45.85%), Query Frame = 1
Query: 529 DIAAAFHRATWDATAEARDHRHAYGGLPADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLC--AGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASPVMAGLLVVVPE 1209
D AA TWDA A H+ PA A +++ IARA + R+LDVGCG G+L+ F+ CG + G+DLSA M+ VAS + + D ++F D + A + +DAI FN L F DP A + RAA +L + RIV+SH GA V + NP + MPT L+++ + AGL VV+P
Sbjct: 96 DAHAALVEITWDAVAAFLPVTHSPVPTPA-AAKKLTAIARAACGDTNPQPRVLDVGCGNGLLLPFVSACGASASDYYGIDLSARMIEVASSSHSESGASFED-VSFDD-----------------------FALRAASDSDARYDAIVFNGALQFFSDPAATIVRAAELLSNSSESRIVLSHLSGAAFVRVEAKENPNTVRSMMPTLAELQQIADS----AGLQVVIPS 295
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A7S0JGT5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JGT5_9EUKA) HSP 1 Score: 90.9 bits (224), Expect = 1.160e-16 Identity = 76/231 (32.90%), Postives = 105/231 (45.45%), Query Frame = 1
Query: 538 AAFHRATWDATAEARDHRHAYGGLPADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSD--FLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEG---FDAIFFNECLHNFMDPVAALERAAGMLCAGG--RIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASPVMAGLLVVVPE 1209
AA TWDA A H+ PA A +++ IARA R+LDVGCG G+L+ FL CG + +G+DLS+ M+ VA +++ G + D F AF A AAV E FDAI FN L F DP A + AA +L RIV++H GA V ++ NP + MP+ L+++ + A L VV+P
Sbjct: 74 AALVEITWDAVAAFLPVTHSPVPTPASA-KKLTAIARAACGDTNPEPRVLDVGCGNGLLVPFLASCGASASDYLGIDLSSRMIEVAKKSY-GEKAIFDDVSFDAF----------------------------AGKAAVDEHGPRFDAIVFNGALQFFADPAATIVDAAALLSESSESRIVLAHLSGADFVRQEMAQNPNTVRSVMPSLAELQKIASS----AALQVVIPS 270
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A2W4K6T9_9BACT (Methyltranfer_dom domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4K6T9_9BACT) HSP 1 Score: 88.2 bits (217), Expect = 1.580e-16 Identity = 60/184 (32.61%), Postives = 85/184 (46.20%), Query Frame = 1
Query: 607 LPADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRE 1158
+P + L R + IA + + + +V LDVG GTG L+T GV+ +NI GVDLS ML VA +P +++D L V+ P E FDA+FFN C N D AL++ +L AGG I+ISHP G + V +P + P +P L +
Sbjct: 30 IPDEILARTQKIAESAELSESSQV--LDVGTGTGALITHFLSLGVKEKNITGVDLSDEMLNVARERYPEVHFIKADIL------------------------DADTVIGKP----EQFDAVFFNACFGNLFDQKMALQKTQALLRAGGSIIISHPLGKRFVKALHDSDPSIVPFFLPEKDQLEK 183
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A836Q1M4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A836Q1M4_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 5.510e-16 Identity = 59/178 (33.15%), Postives = 86/178 (48.31%), Query Frame = 1
Query: 607 LPADALRRMRDIAR-AGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQDPGSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPEGFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMP 1137
+P + L R + IA AG+S ++ ++LDVG GTG L+T GV ENI GVDLS ML++A +P +++D L V+ P + FDA+FFN C N D AL++ +L +GG I+ISHP G + V +P + P +P
Sbjct: 30 IPDEILARTQKIAESAGLSESS---QVLDVGTGTGALITHFLLLGVNDENITGVDLSDEMLKIARERYPKVKFLKADIL------------------------DADTVIGKP----DQFDAVFFNACFGNLFDQKMALQKTGALLRSGGCIIISHPLGKRFVKALHDSDPAIVPFFLP 176
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Match: A0A6H5JR35_9PHAE (Riboflavin kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR35_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 5.680e-16 Identity = 76/217 (35.02%), Postives = 107/217 (49.31%), Query Frame = 1
Query: 610 PADALRRMRDIARAGVSTAAGRVRILDVGCGTGILMTFLEECGVRPENIVGVDLSANMLRVASRNFPGATLVQSDFLAFQDP-----------GSGGRGCATAAAXXXXXXXXXXXVVAAPAAVPE------GFDAIFFNECLHNFMDPVAALERAAGMLCAGGRIVISHPKGAQCVHRQRLHNPILAPNEMPTAGALRELCGASPVMAGLLVVVPE 1209
P + +R IA A +A G R++D GCGTG L++FL+E GV+ ++ GVD+S M FP + ++ ++F+ + D + G G A A XXXXXXXXXXX G + FN N D AALERAA +L GG++VISHP G V R + + + P+E+P AL L P++ PE
Sbjct: 86 PKEQFPSLRRIAEACRPSADGAPRVVDAGCGTGALVSFLKEAGVKERDVTGVDVSPEMGTAFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGAAAAXXXXXXXXXXXXXXXXXXXXXXXEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPEQDALERLVQFLPLVMDSFESGPE 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2024.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2024.3.1 >prot_P-wetherbeei_contig2024.3.1 ID=prot_P-wetherbeei_contig2024.3.1|Name=mRNA_P-wetherbeei_contig2024.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp MALRSRQRMLGNLSLPRTAHSNVRARTPPRVLMAKRGGSGFGGERRNGDVback to top mRNA from alignment at P-wetherbeei_contig2024:4116..5634- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2024.3.1 ID=mRNA_P-wetherbeei_contig2024.3.1|Name=mRNA_P-wetherbeei_contig2024.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1519bp|location=Sequence derived from alignment at P-wetherbeei_contig2024:4116..5634- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2024:4116..5634- >mRNA_P-wetherbeei_contig2024.3.1 ID=mRNA_P-wetherbeei_contig2024.3.1|Name=mRNA_P-wetherbeei_contig2024.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig2024:4116..5634- (Phaeothamnion wetherbeei SAG_119_79)back to top |