mRNA_P-wetherbeei_contig20187.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20187.1.1 vs. uniprot
Match: A0A355TT59_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TT59_9BACT) HSP 1 Score: 182 bits (463), Expect = 3.170e-53 Identity = 98/252 (38.89%), Postives = 153/252 (60.71%), Query Frame = 1
Query: 1 GKMAGPVELGSDYGRAVAALGTASRIQPTASDPNTKLYYHKD--LFVLVGTENKIIGITIVSPAYRTADGLGVGSLEHEIMKRLGQGLMRGQGNRTYANRGIGFSFDATGKATQVYIFRAEGDRPLLGDRLLVAGQRVGDVRLGMRFSLIEKAWGPPSKSKDMGNGEMLCSYPTNAVRIIVHDG-IVDGILVTTGDYVTPQGLKVGVSGVGVQKVLGQSMHKLKNG-LFYPQLGIGFVTESNQVTEIQILYP 744
G+ G V LG + + + LG S++ + +DPN++L + K+ L V +G+ +IGIT++ ++T +G+G+GS + K GQGL RGQGN YA+RG+ FS GK + +Y+F+ E +RPLLGDR++V G+RVG +++G S + +WG MG G L Y A+ +IV+ I++G+++ TGD++T +G+KVG S V KV GQ+ NG L Y GIGF +V++I +L P
Sbjct: 35 GRSVGSVCLGQNINQVRSILGAPSKVVASPNDPNSQLLHFKNHGLAVFMGSNGAVIGITVLGGKWKTPEGIGIGSAGASVTKVYGQGLQRGQGNINYASRGLAFSI-RNGKVSSIYVFKREDERPLLGDRIIVPGKRVGSIKIGTHLSTVSNSWGNADNVTPMGQGRSLHRYKEEAIGLIVNSKQIIEGVVMETGDFITKEGVKVGSSKSEVIKVFGQA--NASNGSLIYENKGIGFRLTQGRVSQITVLSP 283
BLAST of mRNA_P-wetherbeei_contig20187.1.1 vs. uniprot
Match: A0A7X8Y1N6_9BURK (Uncharacterized protein (Fragment) n=2 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8Y1N6_9BURK) HSP 1 Score: 163 bits (413), Expect = 1.140e-45 Identity = 87/244 (35.66%), Postives = 144/244 (59.02%), Query Frame = 1
Query: 1 GKMAGPVELGSDYGRAVAALGTASRIQPTASDPNTKL--YYHKDLFVLVGTENKIIGITIVSPAYRTADGLGVGSLEHEIMKRLGQGLMRGQGNRTYANRGIGFSFDATGKATQVYIFRAEGDRPLLGDRLLVAGQRVGDVRLGMRFSLIEKAWGPPSKSKDMGNG--EMLCSYPTNAVRIIVHDGIVDGILVTTGDYVTPQGLKVGVSGVGVQKVLGQSMHKLKNGLFYPQLGIGFVTESNQV 720
G+ G V LG G ALG +R+ + +DPN+KL Y + + V +G+ +IG+ + +++T +G+ VG+ + ++ K G+GL+RG+GN TY +RG+ FSF GK +Y+F+ E R L+GDRL+ G+RVG + LG S +E+AWG + +G G E L S+ AV ++V G + G+++ TGD++T +G+KVG + V + G + ++Y GIGF + ++V
Sbjct: 51 GQGVGAVRLGQTLGELRKALGPPARVTASPNDPNSKLLDYPKRGISVFLGSSGGVIGVVVRGRSWQTPEGIAVGTSQGQVTKLFGKGLVRGEGNLTYPDRGLAFSF-RNGKVHTIYVFQREESRALMGDRLIEPGRRVGQILLGDPVSRVEEAWGRADRVLPLGQGGQEKLYSFKEEAVGVVVLAGRIQGVILETGDFITREGVKVGSTRAEVLRAFGTTFRSEPGRIWYDVRGIGFWFQGDRV 293
BLAST of mRNA_P-wetherbeei_contig20187.1.1 vs. uniprot
Match: A0A7Z9PVH7_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVH7_9BACT) HSP 1 Score: 147 bits (372), Expect = 1.230e-39 Identity = 91/251 (36.25%), Postives = 133/251 (52.99%), Query Frame = 1
Query: 1 GKMAGPVELGSDYGRAVAALGTASRIQPTASDPNTK--LYYHKDLFVLVGTENKIIGITIVSPAYRTADGLGVGSLEHEIMKRLGQGLMRGQGNRTYANRGIGFSFDATGKATQVYIFRAEGDRPLLGDRLLVAGQRVGDVRLGMRFSLIEKAWGPPSKSKDMGNGEMLCSYPTNAVRIIVHDGIVDGILVTTGDYVTPQGLKVGVSGVGVQKVLGQSMHKLKNGLFYPQLGIGFVTESNQVTEIQILYPR 747
G+ AGP LGS + + LG + P+A DP TK LY L LV E+K+IGIT+V ++TA GLGVGS + G+GL RGQG + GI ++ G +YI + + P+ GD L+V G R G +R+G + K GPPS + G + + YP +R+ G + + VT+GD+VTP GLKVG ++K LG ++ +FY + GIG + + + EI I P+
Sbjct: 34 GEQAGPFRLGSSFQTVLQRLGAPNSDNPSAGDPGTKMKLYPKHQLGFLVNPESKVIGITVVRKDWKTARGLGVGSPVVAFQEVYGRGLKRGQGQLAFPQHGIALTYTG-GTVQTIYIVKKDAVDPVKGDHLVVGGTRAGQLRIGRTSDDLLKLLGPPSSKE--GAQKNIWVYPDRGIRLGFIQGRLHLVGVTSGDWVTPSGLKVGRPFSEMKKELGSDYRVERSSVFYDKWGIGARLQGDMLVEILIFNPK 281
BLAST of mRNA_P-wetherbeei_contig20187.1.1 vs. uniprot
Match: X1VRM2_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1VRM2_9ZZZZ) HSP 1 Score: 53.5 bits (127), Expect = 7.720e-5 Identity = 49/216 (22.69%), Postives = 90/216 (41.67%), Query Frame = 1
Query: 148 ENKIIGITIVSPAYRTADGLGVGSLEHEIMKRLGQGLMRGQGN----RTYANRGIGFSFDATGKAT-QVYIFRAEGDRPL-----LGDRLLVAGQRVGDVRLGMRFSLIEKAWGPPS------KSKDMGNGEMLCSYPTNAVRIIVHDGIVDGILVTTGDYVTPQGLKVGVSGVGVQKVLGQSMH----KLKNGLFYPQLGIGFVTESNQVTEIQI 735
++ + IT++SP+Y+ A+GLGVG E +I + G + Y ++G+ F + + ++ + + + + +++V G RVGD M I ++ G P + N P + ++ +G+V GI + Y GL+VG S ++K G K K+ L Y G+ F T ++I
Sbjct: 35 DDSVKEITVLSPSYKFANGLGVGDSERKIKQVFGDDFQLKETEWKDFLAYKDKGLVFEINKQDRTVMEINVSPIDSSKSYKKAADIVSKIIVPGIRVGDYTFNMSKDDILESLGKPGGIFYGDNKYTLDNLPEKYYMPYEDISFLIVNGLVKGITALSPSYKLTNGLRVGDSEQKIKKAFGDDFKIKESKWKDYLSYKDEGLMFEINKQDRTVMEI 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20187.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20187.1.1 >prot_P-wetherbeei_contig20187.1.1 ID=prot_P-wetherbeei_contig20187.1.1|Name=mRNA_P-wetherbeei_contig20187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp MAGPVELGSDYGRAVAALGTASRIQPTASDPNTKLYYHKDLFVLVGTENKback to top mRNA from alignment at P-wetherbeei_contig20187:479..1228- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20187.1.1 ID=mRNA_P-wetherbeei_contig20187.1.1|Name=mRNA_P-wetherbeei_contig20187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig20187:479..1228- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20187:479..1228- >mRNA_P-wetherbeei_contig20187.1.1 ID=mRNA_P-wetherbeei_contig20187.1.1|Name=mRNA_P-wetherbeei_contig20187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig20187:479..1228- (Phaeothamnion wetherbeei SAG_119_79)back to top |