mRNA_P-wetherbeei_contig20148.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A7C4XN09_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XN09_9HYPH) HSP 1 Score: 154 bits (389), Expect = 1.050e-43 Identity = 86/183 (46.99%), Postives = 120/183 (65.57%), Query Frame = 1
Query: 28 AVVGLLADHLDAVLAAGEDLLALEVDVEGTRKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDEDIAGE 576
A + ++ADHLDAVLAAGEDLL L +D+ ++D + P E+ FV ++ E +V LQAR RA R++ A+ + L+ F GG AVLED+VAEL D +DF+ G DPLAY+R+RG++ ADAG+LL R++ GE F++ RRI LGLL+DL AA L+AL++ Y L + GE
Sbjct: 10 ATIAIIADHLDAVLAAGEDLLRLRLDLAECARADRSGMPGERLRTFVEEVRTLEALLVGHTLQARTRA----RELAAAEAAVKQLLDLFAGGMAVLEDAVAELGDTTAADFETGDDPLAYLRSRGLLAADAGSLLGLERIV-VGERFLIVRRIALGLLMDLAAALLNALEDCYLLAGGEEEGE 187
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A2W4L0W4_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L0W4_9PROT) HSP 1 Score: 125 bits (314), Expect = 1.680e-32 Identity = 90/210 (42.86%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 1 MARAGINIAAVVGLLADHLDAVLAAGEDLLALEVDVEGT---RKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDEDIAGEAGELSD--GDAPAEP 615
M +AG N +A V LLADHLDAVLAAGEDLL + V R+ + ++ +++ E+T+ R LQAR RA++ R R D I FIGGTA L D+ AEL D DF G + Y+R+RG+IP D+ +++ R++ F +ARRI LG LLDL AAFLDAL+ Y L+DED E SD G P P
Sbjct: 1 MDQAGNNKSATVYLLADHLDAVLAAGEDLLKVHRTVFAEVPKRRPHNVRDLVDIQRRWLDAVRVLEMTLTLRCLQARERADELRRSDDRVDGIASL----FIGGTAPLADAAAELGDWTEIDFQTGDEIAEYLRSRGLIPIDSEGVVSPERLVVTAN-FRIARRIELGPLLDLTAAFLDALELFYELYDEDELEERAAKSDEEGTLPTRP 205
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: UPI000AA87457 (hypothetical protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000AA87457) HSP 1 Score: 124 bits (312), Expect = 3.010e-32 Identity = 81/174 (46.55%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 40 LLADHLDAVLAAGEDLLALEVDVEGT--RKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLF 555
LLA+HLDA LAAGEDL + G R+ + A E + ++ +EL ++SRVL+ R AE+ V ++ + ++GGTAVL D+V E AD +DFD G D LAY+R+RG+IPADA L + T L AGE F+VARRI LG LLDL A FLD L+ Y LF
Sbjct: 18 LLAEHLDAALAAGEDLTGVLFIWPGAAPREPEKIAELREGQRSAIERIRTFELALISRVLKGREWAEE----VAESEERFALMARLYLGGTAVLLDAVEECADVSAADFDAGSDLLAYVRSRGMIPADAPAL-SDTTPLVAGEDFLVARRIPLGPLLDLAAMFLDTLEAEYELF 186
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A2W4RWJ1_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RWJ1_9PROT) HSP 1 Score: 121 bits (303), Expect = 7.440e-31 Identity = 87/193 (45.08%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 1 MARAGINIAAVVGLLADHLDAVLAAGEDLLALE----VDVEGTRKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPAD-AGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDED 564
M +AG N + LLADHLDA+LAAGEDLL +V+ R+S E +V ++ E+T+ R L+AR RAE+ R R D I G FIGGTA L D+ EL D +DF G + Y+R+RG+IP D AG + V++A F VARRI LG LLDL AAFLDAL+ Y L+DE+
Sbjct: 1 MDQAGNNTNTIAYLLADHLDAMLAAGEDLLKAHRVVLAEVQD-RRSTEIRDLIEVRRRWVETVRTLEMTLTLRCLRARERAEELRRADYRVDGITGL----FIGGTAALADAAEELGDWTETDFHTGDEIAEYLRSRGLIPPDSAGVVSLHQLVVTA--NFRVARRIELGPLLDLTAAFLDALELFYDLYDEE 186
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: D8JUG7_HYPDA (Uncharacterized protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=D8JUG7_HYPDA) HSP 1 Score: 116 bits (290), Expect = 6.330e-29 Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 1
Query: 1 MARAGINIAAVVGLLADHLDAVLAAGEDLLALEVDVEGTRKSDGAAAPWEKFEPFVA-GLKLYELTIVSRVLQARRRAEDAHR--DVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDE 561
M+R V LLADHLD LAAGEDL+A D + G A + + +A ++ EL +V+RVL+AR A D RA +G L F GTA+L+D+V+E D G DF+ G D ++Y+R+RG+I DA + G L+ + F+VA+RI LG LLD+ AAFLDALD+ Y LF E
Sbjct: 1 MSRYAARAPLSVYLLADHLDGALAAGEDLVARGHDWRALADAPGEPAEFPMHQRRIAEDVRSLELMLVARVLKARTHALSLAEVDDRFRA---VGNL---FASGTAILQDAVSECGDARGEDFETGDDIVSYIRSRGLIAPDAANV-RGAADLTIDDSFLVAKRIALGPLLDMTAAFLDALDSQYELFVE 183
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A3S0G1I9_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0G1I9_9HYPH) HSP 1 Score: 114 bits (284), Expect = 4.040e-28 Identity = 73/172 (42.44%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 40 LLADHLDAVLAAGEDLLALEVDVE-----GTRKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGII-PADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALD 537
LLADHL+ LA GED+LA +VD+ G R + A F++ +L EL++++R+LQAR+ AE A R+ R P+I F+GGTA L D+ +L D F+ G +Y+RTR I+ P DAG L ++ + F+VA R+ LG LLDLVAAFLD LD
Sbjct: 12 LLADHLETALATGEDMLAEKVDLSDSDASGLRDMERLAQRNADLAAFLSRARLLELSLIARLLQARKWAEAAKREEARLKPVIQL----FVGGTASLVDAANDLGDTTNQSFETGDTMTSYLRTRAILGPEDAG--LGNRAQIAVTDDFLVAGRVRLGTLLDLVAAFLDTLD 177
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A7C3LME4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3LME4_9BACT) HSP 1 Score: 114 bits (284), Expect = 5.220e-28 Identity = 76/180 (42.22%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 40 LLADHLDAVLAAGEDLLALEVDVEGTRKSDGAAAPWEK---FEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDEDIA 570
LL DHLDA LA GEDLL +V + + A + F+ G++ EL +++R+LQ R+RAE+ R R P LI F+ GTA L D+ EL D FD G A++R+RG+I DA L TR L+ E ++VA RI LG LLDLVA FLD LD + L+ E+ A
Sbjct: 14 LLGDHLDAALAMGEDLLTEKVTLAAAEQKLNMARLVRQAGEVADFLHGVRTLELNLIARLLQGRKRAEELKRKETRLKP----LISLFVAGTAPLVDAAEELGDTTTEAFDTGNVAQAFLRSRGLIARDAAGLDGLTR-LAVTEEYLVAGRIRLGTLLDLVATFLDMLDTLFDLYREEPA 188
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A109BGI0_HYPSL (Uncharacterized protein n=3 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BGI0_HYPSL) HSP 1 Score: 113 bits (282), Expect = 9.610e-28 Identity = 74/174 (42.53%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 40 LLADHLDAVLAAGEDLLALEVDVEGT--RKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLF 555
LLA+HLDA LAAGEDL ++ G R+++ A + ++ +EL ++SR+L+ R A + V ++ + ++ GTA+L D+VAE AD G+DFD G + Y+R+RG+I ADA TL + T L A E F+VA+RI LG LLDLVA FLD L+ Y LF
Sbjct: 17 LLAEHLDAALAAGEDLTSVLFIWSGPPPREAERIAELRAGQREAIERIRTFELALLSRILKGREWAAE----VAESEENFAFMAKLYLSGTAILLDAVAECADVSGTDFDAGDSLIGYVRSRGMIAADAPTL-SDTAPLCASEDFLVAKRIPLGPLLDLVAKFLDTLEAEYELF 185
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: A0A7C2QT50_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QT50_9HYPH) HSP 1 Score: 113 bits (282), Expect = 1.150e-27 Identity = 74/175 (42.29%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 40 LLADHLDAVLAAGEDLLALEVDV-EGTRKSDGAAAPWEKFE--PFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLF 555
LL D+LDA LA GEDL+ V + + T + A + E F+ G++ ELT+++R+LQARR A+D R R P LI F+ GTA L D+ +L D +F+ G A++R+RG+I DA L G L+ GE +++A RI LG LLDLVA FLD LD Y L+
Sbjct: 14 LLGDNLDAALAMGEDLMTERVALADNTERLTTARLVRQNRELGEFLTGVRTLELTMIARLLQARRLAQDLKRRESRLKP----LIALFVAGTAPLADAARDLGDTTAHEFETGDTASAFLRSRGLIARDAPGL-EGLAQLAVGEDYLLAGRIRLGTLLDLVATFLDTLDLLYDLY 183
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Match: UPI0009313B9B (hypothetical protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI0009313B9B) HSP 1 Score: 113 bits (283), Expect = 2.020e-27 Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = 1
Query: 43 LADHLDAVLAAGEDLLALEVDVE------GTRKSDGAAAPWEKFEPFVAGLKLYELTIVSRVLQARRRAEDAHRDVMRADPIIGTLIGSFIGGTAVLEDSVAELADRVGSDFDCGLDPLAYMRTRGIIPADAGTLLAGTRVLSAGEGFMVARRIGLGLLLDLVAAFLDALDNAYGLFDE 561
L +HLDA LAAGE L++L +++ G R+ A + +F V GL E ++++ +LQARRR + R RA + L+ F GT VL D+VAE D G F+ G D LAY+R RG+I D+G L+ T GE F+VA RI LG LLDLV AFL AL+ +GL+++
Sbjct: 15 LVEHLDAALAAGEQLMSLSLEMTEPTPQMGPRRLRTRVARFIRFVTQVRGL---EASLIAHILQARRRVAELPRG--RAP--LRLLLDPFTSGTTVLLDAVAEYGDPAGFAFNTGADRLAYLRARGLIAGDSGALMPVT-TFEIGESFLVAGRIELGPLLDLVEAFLHALNTEFGLWND 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20148.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20148.1.1 >prot_P-wetherbeei_contig20148.1.1 ID=prot_P-wetherbeei_contig20148.1.1|Name=mRNA_P-wetherbeei_contig20148.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp MARAGINIAAVVGLLADHLDAVLAAGEDLLALEVDVEGTRKSDGAAAPWEback to top mRNA from alignment at P-wetherbeei_contig20148:388..1002+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20148.1.1 ID=mRNA_P-wetherbeei_contig20148.1.1|Name=mRNA_P-wetherbeei_contig20148.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig20148:388..1002+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20148:388..1002+ >mRNA_P-wetherbeei_contig20148.1.1 ID=mRNA_P-wetherbeei_contig20148.1.1|Name=mRNA_P-wetherbeei_contig20148.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig20148:388..1002+ (Phaeothamnion wetherbeei SAG_119_79)back to top |