mRNA_P-wetherbeei_contig2014.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2014.2.1
Unique NamemRNA_P-wetherbeei_contig2014.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A6H5L731_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L731_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.060e-58
Identity = 121/259 (46.72%), Postives = 158/259 (61.00%), Query Frame = 3
Query:  183 ESYVGAGKVSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQA---LSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKG--VLRNTLLNNFFLFLYLVCDVPVDTIFAMYYGRRP 944
            E +VG G VS+V+PAYNE   ++ TL +ID +  D++  EI++V+AGC D TM    ++ L   +    S GGRGPALNAGA  A GD+LLF HADT +PP  D  +R AF  DP  LM+ F F ++R A + G+ P G+ +ME  TN R R+  + YGDQA      TAH F  +GGFP+  +MED  +V  +RKE    G  IHVL +AALC+PRRWE+ G     N   N  FLFLY       + IF +YYGR P
Sbjct:   34 ECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQDKSLVEIIVVDAGCKDHTMDAVASMKLDVKLSTTTSVGGRGPALNAGARMAKGDLLLFVHADTIVPPAFDVTLRKAFR-DPEILMSTFLFGINR-ALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQASRAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEQPGNNPFVNFWRNWMFLFLYSKLGFSPEQIFRLYYGRDP 290          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A835ZCJ3_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.890e-58
Identity = 119/258 (46.12%), Postives = 155/258 (60.08%), Query Frame = 3
Query:  201 GKVSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTP--MHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPV---------GLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYYGRR 941
            G ++++IPAYNE A +  TL ++ A        E+V+V+ GC+DDTM+ ARAVPL+    +    S GGRGPAL+AGA AA GD+LLF HADT LP   DA +RDAF  DPA L++CF F V+R+ C                GL L+EWA + R R     YGDQAL  +  ++ RLGGFP  P+MED   V   +   +  G+ I  LP  ALCSPRRWE+KGVL  +LLN  F+F Y+V       I+  YYG +
Sbjct:   49 GLITVIIPAYNEGAGIADTLAALSAATEATGLVEVVIVDGGCSDDTMAQARAVPLRLAHGIRTLESRGGRGPALHAGAQAARGDLLLFLHADTLLPQGYDAALRDAFQ-DPALLLSCFRFGVNRAVCAARGAXXXXXXXXXXRGLRLLEWAVDRRTRAKSFPYGDQALCTSRVNYFRLGGFPRVPMMEDFEFVRRAKAVAQGGGWGIRQLPLTALCSPRRWEQKGVLTVSLLNFSFVFRYVVLGWSPQQIYDRYYGTK 305          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A7S3PIZ7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PIZ7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.850e-47
Identity = 103/251 (41.04%), Postives = 146/251 (58.17%), Query Frame = 3
Query:  189 YVGAGKVSIVIPAYNEAAV-LQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPV--GLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYY 932
            +    KVS+VIP YNE A  L   LE +D     ++ TE+++V+AGC+DDTM       ++ P+    S  GRG AL+AGA +A+GDILLF HADT LP   D ++R+  A D   LM  F+F ++             G+  +E+ TN+R R  W+ YGDQAL+M    ++ +GG     +MED  LV  VR+     G RI +LP+ A CSPRRWE+ G+ +N++LN  F+  Y+   +  DTIF  YY
Sbjct:   68 HTSVSKVSVVIPVYNEGAENLIQNLERLDQSTLGKSCTEVIVVDAGCSDDTMEALVKADMRIPVRVLRSKHGRGQALSAGAESATGDILLFLHADTLLPTGYDEVLRNKLA-DKKVLMTAFSFEINVENAEDSTASFRNGIKRLEYFTNIRARNFWLPYGDQALAMRRSAYKEVGGVKRLKMMEDFELVSRVRRIALENGGRIEILPEHAKCSPRRWEKNGIAKNSVLNWTFVAAYVWAGISPDTIFEYYY 317          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: D7FSW3_ECTSI (Glycosyl transferase, group 2 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW3_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.120e-42
Identity = 83/168 (49.40%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  435 ASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYYGR 938
            A GD+LLF HADT +PP  D  +R AF  DP  LM+ F F ++R A + G+ P G+ +ME  TN R R+  + YGDQA   TAH F  +GGFP+  +MED  +V  +RKE    G  IHVL +AALC+PRRWE++GV R++L N  F  LY+V ++  D IF +YYGR
Sbjct:    2 AKGDLLLFVHADTIVPPAFDVTLRKAFR-DPKILMSTFLFGINR-ALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEKQGVFRSSLQNICFALLYVVGNLSADQIFRLYYGR 167          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A0M0JLK4_9EUKA (Glycosyl transferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLK4_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 6.070e-38
Identity = 98/247 (39.68%), Postives = 135/247 (54.66%), Query Frame = 3
Query:  207 VSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSV--ARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRS--ACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYYG 935
            +S+V+PA+NEA  +   LE+++   +   R ++V+V+AGC DDTM++  A A   K  +    S+GGRGPA+ AG   + GD +L  HADT LP   D  V +A A DP  LM  F+F  DR+  +C     P GL LMEW  N R R   + +GDQAL+ T      +GG+P T ++E+  LV  +R        RI  L   ALCSPRRWER  V R   +N   +  +     P   +F  YYG
Sbjct:   78 ISVVVPAFNEARSIGMCLETLERHASSLKRVQVVVVDAGCKDDTMAIVTAWAAQTKVSVLTTTSSGGRGPAVAAGTRLSVGDAILVLHADTALPANWDGAVLEALA-DPTVLMTAFSFGCDRAQLSCPESP-PAGLALMEWTVNRRSRWYELPFGDQALATTRATLDAIGGYPETCILEEFILVNRLRAMSAAGLGRILTLDATALCSPRRWERSTVWRINAVNQAVMLWHRWGATPAQ-VFEFYYG 321          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A7S2RB68_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RB68_9STRA)

HSP 1 Score: 152 bits (385), Expect = 6.720e-38
Identity = 97/243 (39.92%), Postives = 135/243 (55.56%), Query Frame = 3
Query:  204 KVSIVIPAYNEAAVLQATLESIDAVIADRT----RTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIF 920
            K+S+++P YNE A   A L S+   I ++T    RTEIVLVNAGC DDT     +    T +    S+ GRG AL  G  +++G++LLF HAD++LP   D ++R A   DP   M  F+F VD            +  +E + N R    W+ YGDQA+SM+   + RLGG     +MED  LV   R    + G RI +LP+  LCSPRRW+ KG+L  T+ N FF+  ++   V  DTI+
Sbjct:   70 KLSVIVPVYNEGA---ANLHSLVQDIREKTCLKHRTEIVLVNAGCTDDTFQDIGSFINDTKV--VKSSPGRGQALRTGVDSSAGELLLFLHADSQLPLGYDNILRKALC-DPEVEMCAFSFKVDNRGIHDRAFLKSIAHIERSANQRSAFLWLPYGDQAISMSRQSYSRLGGIQPYSMMEDFDLVTRARHSALKNGRRICILPENVLCSPRRWQNKGILATTIRNWFFVAAFVWGKVTPDTIY 306          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A8J6VLA3_9CYAN (TIGR04283 family arsenosugar biosynthesis glycosyltransferase n=7 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VLA3_9CYAN)

HSP 1 Score: 147 bits (371), Expect = 9.380e-37
Identity = 106/258 (41.09%), Postives = 143/258 (55.43%), Query Frame = 3
Query:  174 SPKESYVGAGKVSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYYG-RRP 944
            SPK S   + K+SI+IP  NEA V+Q  L+ I       +  EI++V+ G  D T+ + +++  +  +H   S  GR   +NAGA AASG+ILLF HADTRLP     L+    A  P  +   F   +D      G+ P GL L+EW  N+R R   + YGDQAL + A  F RLGGFP  P+MED  LV    +  RR G ++ + P + L S RRWE+ GV+R TLLN   +  YL+   P + I   Y G RRP
Sbjct:    4 SPKIS--PSPKISIIIPVLNEANVIQQILDQIRT-----SAVEIIVVDGGSHDRTVEIVKSLGDRV-IH---SRPGRAYQMNAGARAASGEILLFLHADTRLPKEFAGLICQTLA-QPKTIAGAFALRID------GQNP-GLRLVEWGVNMRSRYFQMPYGDQALFLKAETFHRLGGFPELPIMEDFELV----RRLRRKG-KVAIAPASVLTSARRWEKLGVMRTTLLNQVIIAAYLLGISP-EKIVRWYRGDRRP 236          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: UPI001E568BAB (TIGR04283 family arsenosugar biosynthesis glycosyltransferase n=1 Tax=Nostoc sp. CHAB 5824 TaxID=2780402 RepID=UPI001E568BAB)

HSP 1 Score: 147 bits (371), Expect = 1.080e-36
Identity = 89/236 (37.71%), Postives = 137/236 (58.05%), Query Frame = 3
Query:  192 VGAGKVSIVIPAYNEAAVLQATLESIDA--VIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLV 893
            +GA K+SI+IPA NEA  ++  + +I +  V    T  E+++V+ G  DDT+++A+++ +K      +S+ GR   +N GA AA+GDILLF HAD+RLP   D ++R A    P  +   F   +D S        + L  +EW  NLR     + YGDQA+ +T   F+++GGFP  P+MED  L+    +  +R G R+ ++P   + S RRW +KGVL+ TLLN   +  YL+
Sbjct:    5 IGAAKISIIIPAINEAGNIKEAIPTISSANVCTQSTNIEVIVVDGGSQDDTIAIAQSLGVKV----ISSSPGRAVQMNTGAIAATGDILLFLHADSRLPAGFDDMIRTALQ-QPGTVAGAFKLRIDASL-------LSLRWVEWGVNLRSHFYQMPYGDQAIFLTKEVFQQIGGFPELPIMEDFELM----RRLKRIG-RVVIIPTPVVTSARRWLQKGVLKTTLLNQIVIIAYLL 223          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A8J7D9L2_9CYAN (TIGR04283 family arsenosugar biosynthesis glycosyltransferase n=1 Tax=aff. Roholtiella sp. LEGE 12411 TaxID=1828822 RepID=A0A8J7D9L2_9CYAN)

HSP 1 Score: 145 bits (365), Expect = 6.210e-36
Identity = 89/234 (38.03%), Postives = 134/234 (57.26%), Query Frame = 3
Query:  192 VGAGKVSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLV 893
            + A K+SI+IPA NEA  ++  + +I+         E+++V+ G  DDT+++A+++ +K      +S+ GR   +NAGA AASG+ILLF HADTRLP   DA++  A    P  +   F   +D S        + L  +EW  N R R   + YGDQA+ +T   F+ +GGFP  P+MED  L+    +  +  G RI ++P   + SPRRW +KGVL+ TLLN   +  YL+
Sbjct:    5 IDAAKISIIIPAINEAGNIKEAIATIEL----SKNIEVIVVDGGSQDDTVAIAQSLGVKV----ISSSPGRAAQMNAGAMAASGEILLFLHADTRLPTGFDAMIPTALQ-QPRTVAGAFNLRIDASL-------LSLRWVEWGVNWRSRFCQMPYGDQAIFVTKQIFQEIGGFPELPIMEDFELM----RRLKNTG-RIVIIPVPVITSPRRWLQKGVLKTTLLNQIVIIAYLL 217          
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Match: A0A252D6R0_9NOSO (Glycosyltransferase n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252D6R0_9NOSO)

HSP 1 Score: 142 bits (359), Expect = 4.210e-35
Identity = 87/234 (37.18%), Postives = 134/234 (57.26%), Query Frame = 3
Query:  192 VGAGKVSIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAVPLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRDAFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYGDQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAALCSPRRWERKGVLRNTLLNNFFLFLYLV 893
            +GA  +SI+IP  NEAA ++ TL    A     T TE+++V+ G  DDT+++A+++ +K      +S+ GR   +NAGA AA+G+ILLF HADTRLPP  DA++R A       +   F   +D S         G+ L+EW  N R     + YGDQA+ +T   F+++G FP  P+MED  L+  ++     +  RI ++ +  + S RRW RKG+ + TL+N   +  YL+
Sbjct:    5 LGAATISIIIPTLNEAANIKDTL----ATTQPSTNTEVIVVDGGSQDDTVAIAQSLGVKV----ISSSLGRAVQINAGAVAANGEILLFLHADTRLPPGFDAMIRTALQ-QSRTVAGAFNLRIDASGW-------GIRLVEWGVNWRSHFLQMPYGDQAIFITKEVFQQIGSFPELPIMEDFELIRRLK-----SNGRIAIITEPVVTSARRWLRKGIFQTTLINQIVIVAYLL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2014.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L731_9PHAE1.060e-5846.72Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A835ZCJ3_9STRA6.890e-5846.12Nucleotide-diphospho-sugar transferase n=1 Tax=Tri... [more]
A0A7S3PIZ7_9STRA1.850e-4741.04Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
D7FSW3_ECTSI2.120e-4249.40Glycosyl transferase, group 2 family protein n=1 T... [more]
A0A0M0JLK4_9EUKA6.070e-3839.68Glycosyl transferase n=1 Tax=Chrysochromulina tobi... [more]
A0A7S2RB68_9STRA6.720e-3839.92Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A8J6VLA3_9CYAN9.380e-3741.09TIGR04283 family arsenosugar biosynthesis glycosyl... [more]
UPI001E568BAB1.080e-3637.71TIGR04283 family arsenosugar biosynthesis glycosyl... [more]
A0A8J7D9L2_9CYAN6.210e-3638.03TIGR04283 family arsenosugar biosynthesis glycosyl... [more]
A0A252D6R0_9NOSO4.210e-3537.18Glycosyltransferase n=3 Tax=unclassified Nostoc Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2014contigP-wetherbeei_contig2014:1960..4765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSW3
PFAMsDUF2064,Glycos_transf_2
Model size1955
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue4.53e-46
EggNOG OGs2E0YR@1|root,2S8BV@2759|Eukaryota
Ec32 ortholog descriptionGlycosyl transferase, family 2
Ec32 orthologEc-27_006590.1
Cds size888
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2014.2.1prot_P-wetherbeei_contig2014.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2014 2019..3757 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186192.1007469-UTR-P-wetherbeei_contig2014:1959..20181683186192.1007469-UTR-P-wetherbeei_contig2014:1959..2018Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2014 1960..2018 +
1683186192.1821907-UTR-P-wetherbeei_contig2014:3757..47651683186192.1821907-UTR-P-wetherbeei_contig2014:3757..4765Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2014 3758..4765 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186192.117435-CDS-P-wetherbeei_contig2014:2018..20921683186192.117435-CDS-P-wetherbeei_contig2014:2018..2092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2014 2019..2092 +
1683186192.132012-CDS-P-wetherbeei_contig2014:2184..24301683186192.132012-CDS-P-wetherbeei_contig2014:2184..2430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2014 2185..2430 +
1683186192.1427627-CDS-P-wetherbeei_contig2014:2570..28561683186192.1427627-CDS-P-wetherbeei_contig2014:2570..2856Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2014 2571..2856 +
1683186192.1530688-CDS-P-wetherbeei_contig2014:3147..32731683186192.1530688-CDS-P-wetherbeei_contig2014:3147..3273Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2014 3148..3273 +
1683186192.162165-CDS-P-wetherbeei_contig2014:3601..37571683186192.162165-CDS-P-wetherbeei_contig2014:3601..3757Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2014 3602..3757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2014.2.1

>prot_P-wetherbeei_contig2014.2.1 ID=prot_P-wetherbeei_contig2014.2.1|Name=mRNA_P-wetherbeei_contig2014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
MAPLRRQGASSVAVAIAGVAAGAAALTLLHRRRRTSLASPKESYVGAGKV
SIVIPAYNEAAVLQATLESIDAVIADRTRTEIVLVNAGCADDTMSVARAV
PLKTPMHFAASTGGRGPALNAGAAAASGDILLFCHADTRLPPRADALVRD
AFAGDPAALMACFTFAVDRSACVGGRVPVGLGLMEWATNLRCRLSWIMYG
DQALSMTAHHFRRLGGFPNTPLMEDVHLVLCVRKECRRAGFRIHVLPQAA
LCSPRRWERKGVLRNTLLNNFFLFLYLVCDVPVDTIFAMYYGRRP*
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mRNA from alignment at P-wetherbeei_contig2014:1960..4765+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2014.2.1 ID=mRNA_P-wetherbeei_contig2014.2.1|Name=mRNA_P-wetherbeei_contig2014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2806bp|location=Sequence derived from alignment at P-wetherbeei_contig2014:1960..4765+ (Phaeothamnion wetherbeei SAG_119_79)
CTAAAGAGGAAAAAGATTGCGGCGAGGAAAGAGCTCCGCCGCGAAATAGA GTCAAACATATGGCGCCGTTGCGAAGACAAGGCGCCTCCTCCGTCGCCGT TGCAATCGCTGGCGTCGCCGCCGGAGCCGCCGCGTAAGTCCTTCCATAGC GATTGTTGAACGAAAGCAAAGCAGCGAGAAGTGACTCCCTTTCTCTCGTT TCTCTCGTCTTTCTTCGATACGCAGGCTCACATTGCTGCATCGGCGACGC CGAACATCGCTTGCATCACCTAAAGAGAGCTATGTCGGCGCCGGAAAGGT TTCCATCGTCATCCCGGCCTACAACGAGGCGGCCGTCTTGCAAGCGACGC TAGAGAGCATTGACGCGGTGATCGCTGACCGCACGCGGACCGAAATCGTG CTCGTCAATGCAGGCTGCGCCGACGACACCATGAGCGTGGCTCGTGCCGT CCCTCTGAAGACGCCTATGCAGTGAGAAACAACTCAGTTCAAAGCAAGAC TTCTCTTCGTTTTCCGTTCTCTTCGTTTTCCGAAAGCTGTTAACCAATCG GACGGAAAAGATAAAAGTCGTCTTCCCTCTCCTTCTTACCACCGGCTTTC CGCCTGCGCAGCTTCGCCGCCTCGACCGGCGGCCGCGGACCTGCCCTCAA CGCCGGCGCCGCCGCCGCTTCCGGCGACATCCTCCTCTTCTGCCACGCCG ACACGCGCCTGCCGCCGCGCGCCGACGCACTCGTCCGCGACGCCTTTGCC GGAGATCCTGCAGCGCTGATGGCGTGCTTCACCTTTGCCGTTGACCGCTC CGCCTGCGTTGGCGGTCGCGTGCCAGTTGGGCTCGGGCTGATGGAATGGG CCACCAACCTGCGGTGCCGCCTCTCTTGGATCATGTACGGAGACCAAGTC AGTGAGCCGGCGCGGAGCGAGAGAGGATGGTGTCGCGCTGTTGAAATATC TTTTTGGTCTTGCTGCCACGGTCGACACGTTTGCCTCTTCTTGACGCGCG GTTGCAGAAGTCGTACGCTACCCGCCACTGGGAAGCTCTTAATGCTTTTA GTGCTTTAGATCTTGGCGACGGGGTGAAGAGAAGTGGCTTACTTCCTGCC GTTCTTCGCAGCTCACTACTCTGGCTACGTTTACCAGATGAACCGGTTCT CCTCCTCTCTGTCGCCGTACCCGTCTCTGCCCCTTCAGGCGCTGAGCATG ACGGCGCACCACTTCCGGCGGCTGGGCGGCTTCCCGAACACGCCGCTGAT GGAGGACGTTCATCTCGTGCTGTGCGTCCGGAAGGAGTGCCGCCGGGCCG GATTCAGAATACATGTGAGCCAGGCCAAAAAAGTGAAAAAAAGGCTGTAG AGAAAGATTGAATGGGCTATCTAAGGTTCACCGATTATGGTGTACAACGC CATTTCTGCCAGATGTCAGCGGGATTACCAAACGGAAAACCAAAAGAAAA AGCCTACGTCATGAAAGTCTGCTCCTCTTGCTATCGTGCCTCTAATAGCG GTTGCCCTCCCTCCTTGCGCCCGCTTCCGGCTGCTTCGTCCTTGCGCACC GTCCCCGCCGGCATCATTTCTTATCCTCCTGTTCGCCCTCTGCCTTTCCC ACCTGTCCCATCCTACCCCGCCTGCCCCGCCGGCGGCCGCAGGTGCTGCC GCAGGCGGCGCTGTGTTCCCCGCGGCGGTGGGAGCGCAAGGGCGTGCTGC GCAACACATTGCTGAACAACTTTTTCCTCTTTCTGTACCTTGTCTGCGAC GTGCCTGTGGACACCATCTTTGCAATGTACTACGGCCGGCGCCCCTGAGA CGACGGGTTAGTGTTGTCGCTGTCGCCCGGCCGCCGTCTGCCACCGCTGC CGACCTTTGTAGTTTGCTTGCTTCTGGGCAACAATGTGCGCCATATTTCC TGACTGAATGGGCTTCCGGGGTTGTGGACGTCTTAGGCGATGGTAGCGGG CTGCTGTTGTGGTTGCTGAGAAAGGGCACGGCATTGGTATGCTGTTTGTA TGTTTGATTGGTATGGCCGCGTTGATAAAAAGTGAGGGGACACAGCCGCT GCCGCGTGGGTGGCGGGTGTGGTGGCAGTCGTGGGATTGGGCACTTGCGG CGAAGTCCGTGGCCGTAAGCGCAGACATGTTCCATCCATCGGCGCACGGC GTTGCGAGTCCTTGGAGCGGTGTCAAAGACTGTGACGGCGGCGTTGGCAA GATGCCGGAGGAAGAAAACCAAAAGTTCAGAAGAAGTAGATTCGTTGTAA AGTTTGGCGCCTGCAACAGCCCGGAGCGTCCATTAGCGGCCATAGCTGGT TATGACGTGTGGTCAAGGTCTTTGGGGCAGCTGTCGCCGCTGCTGGCCCC TGTGTTTATTGGTGCTTTCCCTTCGGCTGCGGCGCCCCAGGCTGCATGTA CTCTAGGTGTGTGTCGGCGTCTGAGTCGGACTGGCAGACAACAGCGACCA GCCTGAAGCCCGGCTTGGCCGGACGCTGCCATACCCGCCCACATGCAGCT CGGCGCGCTGTAGCTCGGGTGAGAACGAATATTGTATTGCTTCTCCGCCA TTGTGGCGGTCTAGCCAGCGGTAGCGGCGGTTGCGGCGGCGGCGGCGGCA GCGGCTGATACTTATTGCGTTGGTCATGAGGGAGCTTTGATTACCTCTGG TGGGATGGTTGGAGTGACGTGAGGGACATGCATTCACTTCGGGTATATAT ATGGGTTTTTCCTTTCGCATAGAGCTTTGGAAAGGACCGGCACTCAATCC AACCTTACGCTTCGACGTTATGCCTCTGGATCACGTCCGTTGCAGCCATC ACACCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2014:1960..4765+

>mRNA_P-wetherbeei_contig2014.2.1 ID=mRNA_P-wetherbeei_contig2014.2.1|Name=mRNA_P-wetherbeei_contig2014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig2014:1960..4765+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCCGTTGCGAAGACAAGGCGCCTCCTCCGTCGCCGTTGCAATCGC
TGGCGTCGCCGCCGGAGCCGCCGCGCTCACATTGCTGCATCGGCGACGCC
GAACATCGCTTGCATCACCTAAAGAGAGCTATGTCGGCGCCGGAAAGGTT
TCCATCGTCATCCCGGCCTACAACGAGGCGGCCGTCTTGCAAGCGACGCT
AGAGAGCATTGACGCGGTGATCGCTGACCGCACGCGGACCGAAATCGTGC
TCGTCAATGCAGGCTGCGCCGACGACACCATGAGCGTGGCTCGTGCCGTC
CCTCTGAAGACGCCTATGCACTTCGCCGCCTCGACCGGCGGCCGCGGACC
TGCCCTCAACGCCGGCGCCGCCGCCGCTTCCGGCGACATCCTCCTCTTCT
GCCACGCCGACACGCGCCTGCCGCCGCGCGCCGACGCACTCGTCCGCGAC
GCCTTTGCCGGAGATCCTGCAGCGCTGATGGCGTGCTTCACCTTTGCCGT
TGACCGCTCCGCCTGCGTTGGCGGTCGCGTGCCAGTTGGGCTCGGGCTGA
TGGAATGGGCCACCAACCTGCGGTGCCGCCTCTCTTGGATCATGTACGGA
GACCAAGCGCTGAGCATGACGGCGCACCACTTCCGGCGGCTGGGCGGCTT
CCCGAACACGCCGCTGATGGAGGACGTTCATCTCGTGCTGTGCGTCCGGA
AGGAGTGCCGCCGGGCCGGATTCAGAATACATGTGCTGCCGCAGGCGGCG
CTGTGTTCCCCGCGGCGGTGGGAGCGCAAGGGCGTGCTGCGCAACACATT
GCTGAACAACTTTTTCCTCTTTCTGTACCTTGTCTGCGACGTGCCTGTGG
ACACCATCTTTGCAATGTACTACGGCCGGCGCCCCTGA
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