mRNA_P-wetherbeei_contig20087.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20087.1.1
Unique NamemRNA_P-wetherbeei_contig20087.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: UPI001552F589 (TIGR04255 family protein n=1 Tax=Alterinioella nitratireducens TaxID=2735915 RepID=UPI001552F589)

HSP 1 Score: 229 bits (585), Expect = 8.990e-72
Identity = 114/263 (43.35%), Postives = 163/263 (61.98%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHY-DAVKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLPIAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDT-ALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQP 780
            MK++FKN PINE+V+  YF+  +  L+ EH+GLFWS +R+ +P +EQ  PV      G++   + S E+FPMPRFW  A D   L+Q+Q+NAF+ NWRRR+ +YPH+ + +K  FD  +  F  F   ++ +    + L ELTY+N IEACEYW+ P DT++VIP F++P A   A      FN         DL +R++IR+G     P T  L+ E++A G LG   K+ AD WF  AH+ I   F+ +T+ EIQQKYW+P
Sbjct:    1 MKVRFKNSPINELVIATYFNPPLFSLRSEHIGLFWSRIRNEFPAIEQQAPVG-----GAEAFEQISGEFFPMPRFWFVAEDKVNLIQLQKNAFMLNWRRRDAQYPHFAENLKPAFDKYYRIFEDFACEDVGIDKIEIDLCELTYINTIEACEYWEGPQDTSRVIPSFAMPDAGIEASGQPA-FNCTFVYVPSKDLQLRVSIRNGESTARPATPVLVVEIKATGRLGQVGKSAADAWFERAHDAIIACFVGITSKEIQQKYWKP 257          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: UPI00148773AB (TIGR04255 family protein n=1 Tax=Ruegeria sp. HKCCD8929 TaxID=2683006 RepID=UPI00148773AB)

HSP 1 Score: 226 bits (577), Expect = 1.460e-70
Identity = 116/265 (43.77%), Postives = 161/265 (60.75%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTES-SAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHY-DAVKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLP-IAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDT-ALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQP 780
            MK++F+NPPINE+++  YF+  +  L+ EH+GLFWS +RD +P VEQ        P+G   + E    E FPMPRFW  A D   L+Q+Q+NAF+ NWRRR+  YPH+ + +K  FD  +  F  F    + V    +   ELTY+N IE CEYWQ P DTAKVIP FS+P   +E       +   V  QS  +DL +R+ IR+G    +P T  L+FE++A G LG   K+ AD WF  AHE I  +F+ LT+  IQ+++W+P
Sbjct:    1 MKVRFQNPPINELIIATYFNPPLFTLRNEHIGLFWSKIRDGFPEVEQQ------TPYGGVASFEQVGGEIFPMPRFWFVAEDQINLIQLQKNAFMFNWRRRDAEYPHFAENLKPAFDKYYAAFEDFARENVGVQDIQIDQCELTYINAIEVCEYWQGPEDTAKVIPSFSIPETEIEPTTAPSFNCTYVYLQS--NDLQLRVNIRNGEAKAKPGTPVLVFEIKATGRLGQVGKSSADRWFGRAHEAIIASFVNLTSKGIQEEFWKP 257          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: UPI001C8DDC17 (TIGR04255 family protein n=1 Tax=Paracoccus yeei TaxID=147645 RepID=UPI001C8DDC17)

HSP 1 Score: 226 bits (577), Expect = 1.500e-70
Identity = 114/265 (43.02%), Postives = 161/265 (60.75%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGR-YPHY-DAVKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLP-IAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDT-ALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQP 780
            M++KF+NPPINE+V+G YF+  +   + EH+GL WS  RD +P V Q PP+       ++F      E FPMPR+W  A D   L+Q+Q+NAFL NWRRR+   YPH+ + +K  FD  +  F  F++ EL   P  + L ELTY+N+IE CEYW  P DT  V+P F +P   V+ A      FN V   ++  DL + +T+R  R   + D   L+ E+RA G LG  SK+++D WF  AH+ + + F+R+TNP IQQ YW+P
Sbjct:    1 MRIKFQNPPINELVMGTYFNPPLANFRNEHIGLLWSKFRDEFPHVAQQPPIG-----DAEFMMALGGEMFPMPRYWFIAEDQVSLLQVQKNAFLFNWRRRDAHDYPHFHENLKPTFDKYYSRFADFVASELDAPPLAIDLCELTYINLIERCEYWSGPEDTPNVVPEFVVPRFGVQAASAPA--FNCVYAFALAPDLQLTVTVRDARSTIKVDEPVLVIEIRAQGRLGQVSKSESDPWFDRAHDAVIDCFVRMTNPHIQQTYWKP 258          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A6L8CNL8_9GAMM (TIGR04255 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8CNL8_9GAMM)

HSP 1 Score: 224 bits (570), Expect = 1.950e-69
Identity = 114/265 (43.02%), Postives = 162/265 (61.13%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFG-SQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHYDA-VKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLPIAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDTALI-FELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQPE 783
            MK+KFKNPP+NEVV+G YFD  +  L+ EH+G+ WS L++ +P VEQ PP+  P+     +   E S E+ PMPR+W  + D+  L+QIQ++AFL NWRRR+  YP +D  +K  FD  +  F  FL  ++S+ P  +   ELTY++VIE  EYW+ P DT  VIP F +P  V  A+     FN      V+ +L + + IRS    + PD+ L+  E + LG   G  K D D W+ +AHEVI E FL +T+  IQ+++W PE
Sbjct:    1 MKIKFKNPPVNEVVIGAYFDPPLAALRNEHIGILWSRLKEEFPIVEQRPPINSPIQSDHDRIVLELSDEFVPMPRYWFVSGDEVTLIQIQKDAFLLNWRRRDSEYPSFDENLKPSFDKFYGTFEKFLKEDVSIDPPRIGHCELTYIDVIEVSEYWKGPLDTPAVIPSFVIPDCVS-AKNTTPAFNCGYRYDVKPNLQLHLGIRSAVSVKSPDSPLLHLEFKGLGSPNGNEKTDLDAWYDQAHEVILEQFLNMTDETIQREFWIPE 264          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A6B0YQA3_9CHLR (TIGR04255 family protein n=2 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6B0YQA3_9CHLR)

HSP 1 Score: 214 bits (546), Expect = 6.590e-66
Identity = 119/264 (45.08%), Postives = 159/264 (60.23%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHYDA-VKACFDSNFDEFVGFLSRELSVS-PNVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSL-PIAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDT-ALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQP 780
            M + F+NPPINEVV+  YF+ ++ + + EHVGLFW  +R  YP   Q PPV      G +  ++   E +PMPR+W  A DD  L+QIQ+NAF+ NWRRR+  YP +   +K  F+  +D F  FL  E+ +  P + L ELTYVNV+E C +W  P DT  VIP F L    V+       D N  TY+ V DDL I I IRSG  AQ+ D   LIFE+RA   LG  +K++ADEWF  AH  + E F+ +T   IQ++YW+P
Sbjct:    1 MSVVFENPPINEVVVSTYFNPQLSDFRGEHVGLFWEKIRKDYPVARQQPPVG----IGPELVSD---EVYPMPRYWFIADDDANLIQIQKNAFMFNWRRRDNAYPRFHRDIKPTFNRYYDLFSRFLRTEVQMDEPAIDLCELTYVNVVERCAFWDGPQDTQGVIPSFPLINPGVDTVTSPGFDCNY-TYR-VEDDLQISIGIRSGVMAQQADAPVLIFEIRARARLGQVAKSEADEWFERAHHSVLECFVGMTAQNIQERYWKP 255          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: UPI000A0334D6 (TIGR04255 family protein n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI000A0334D6)

HSP 1 Score: 212 bits (540), Expect = 4.550e-65
Identity = 113/264 (42.80%), Postives = 164/264 (62.12%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHYDAVKACFDSNFDEFVGFLSRELSVSPN-VQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLPIA-VEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQE-PDTALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQPE 783
            M++K+K PPINE+++G YF+  I +L+ EHVGLFWS +R+ +PT+ Q P +  P+   + FN E+    +PMPR+WL AAD+ ML+QIQ+NAFL NWR+R+  YPH++ VK  FD  F  F  FL  E  +    V+L ELTY NVI A   W       +V PG ++P+  + G +  + D N VT     +DL + + +R+ R   +   TALIFE R +G+L   + AD+  W+  AH+VI + F   T+P I++K WQPE
Sbjct:    1 MRIKYKKPPINELIVGAYFEPPIHQLQAEHVGLFWSQVRNDFPTILQQPEMAIPVVGQTVFNFEA----YPMPRYWLLAADEVMLIQIQKNAFLLNWRKRDKEYPHFEIVKQQFDRYFGAFQSFLKSEFGLEEAPVRLTELTYTNVITAENGWNGVSAIDEVFPGLTIPVLPISGIQ--EPDINYVTAYRFANDLSMNLVVRTARNPVDIAKTALIFEFRTIGVLEDPTTADS--WYGRAHDVISDCFTATTSPGIREK-WQPE 255          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A6L8EGS2_9GAMM (TIGR04255 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EGS2_9GAMM)

HSP 1 Score: 200 bits (509), Expect = 3.020e-60
Identity = 108/269 (40.15%), Postives = 158/269 (58.74%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVT-------PPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHY-DAVKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLP-IAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDTA-LIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYW 774
            MK++FKNPPINE+ +GVYFD  ++  + EH+GL WS LR  +P VEQ  P++       PP  FG          Y  MPRFW  + D+  LVQ+Q NA+  NWR+RE  YPH+ + +K  FD N + F  FL  E+ +    + L ELTYV+VIE+CEYW+ P DT+K+IP F +P   V+ +  H  DF  +    +  +L +  ++R        D+  LI E +ALG   GA+ +  ++W+ EAH+ I   FL LT+ ++Q+ +W
Sbjct:    1 MKVRFKNPPINELAIGVYFDPPLIPFRSEHIGLLWSRLRREFPKVEQRDPLSIGVHGHVPPA-FGGD-------GYPHMPRFWFVSDDEVNLVQVQNNAYFLNWRKRENEYPHFHEQLKPSFDRNLEMFKQFLREEIKIPEVGIGLCELTYVDVIESCEYWRGPQDTSKLIPSFKIPECGVKNSIAH--DFACMYDWEINSNLHLLTSMRIAEPRDASDSRRLILEFKALGQPSGATTSHLNKWYDEAHDAIVSHFLNLTDKDVQRDFW 259          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A840SZ85_9RHOB (Uncharacterized protein (TIGR04255 family) n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840SZ85_9RHOB)

HSP 1 Score: 184 bits (466), Expect = 7.470e-54
Identity = 94/261 (36.02%), Postives = 150/261 (57.47%), Query Frame = 1
Query:    1 MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRREGRYPHYDAVKACFDSNFDEFVGFLSRELSVSP-NVQLAELTYVNVIEACE-YWQNPGDTAKVIPGFSLPIAVEGAEPHKTDFNQVTYQSVRDDLGIRITIRSGRRAQEPDTALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQ 777
            M+ K+K+PP+NEVV+GVYF   I+ ++ EHVGLFWS+++D +P   Q+      +P G++ +  +S E FP+PRFW  + +   L+Q+QRNAFL NWR+    YPHY+AVKA FD     F+GF  R+  ++  ++   EL YVN+I      +    DT K IP +   +++    P +  F+      +  DL + + ++S +  Q  +  +  ELR  G L   + A    WF  AH+ IG+ F  LT+  +Q+++W+
Sbjct:    1 MRRKYKHPPVNEVVIGVYFKDPILAMRAEHVGLFWSVIKDDFPEAAQN------VPIGAEIDISASGEVFPLPRFWFMSENGIYLIQVQRNAFLLNWRQGGDAYPHYEAVKASFDRWLGVFMGFCERQFGIARLDIARCELNYVNLIGPVPPLFLTFADTEKAIPSYRA-LSIGPDRPARA-FSLTYEYPIASDLALTVIMQSRKNQQSGEDVIYLELRTGGELQAQTDASLSGWFERAHDAIGDAFNALTSETLQKEHWR 253          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A7X3WSA0_9BACT (TIGR04255 family protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3WSA0_9BACT)

HSP 1 Score: 130 bits (326), Expect = 6.230e-33
Identity = 85/258 (32.95%), Postives = 127/258 (49.22%), Query Frame = 1
Query:   13 FKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRRE--GRYPHYDAVKACFDSNFDEFVGFLSRELSVSPNVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLPIAVEGAEPHKT-DFNQVTYQSVRDDLG-IRITIRSGRRAQEPDTALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYW 774
            ++NPPI+E+V G+ FD  I +L+  H G+ W   R  +   E   PV P     SQ +   + + FP+PR W    ++  L+Q+QRN FL NWR+R+    YP Y+ V   F+     F  FL+ E       +  ELTY+++I   + W+N GD  K+ P   LP+  +G         N  T   + ++LG + ++IRS  R  +    L  E RAL             WF  AH  I + F  L + EIQ+K+W
Sbjct:   11 YENPPIDEIVCGIRFD-PIKQLQSGHFGILWQKFRHDFLRTEDQIPVVP----VSQEDL-GNPDKFPLPRVWFVHRNENELIQVQRNRFLHNWRKRQPDDEYPGYEEVIGNFEKYLSCFQEFLAEENLGDLVTKEYELTYIDLIPQGQGWENLGDLEKIFPNL-LPLTRQGIPLEAVRSINWQTILEIPNNLGQLGVSIRSAHRISDNQMLLHMEFRALS---NQPHQPMRTWFENAHNEITKIFSNLVSREIQKKFW 258          
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Match: A0A661TGI7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661TGI7_9DELT)

HSP 1 Score: 118 bits (296), Expect = 2.330e-28
Identity = 83/263 (31.56%), Postives = 116/263 (44.11%), Query Frame = 1
Query:   13 FKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQH-----PPVTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRR--REGRYPHYDAVKACFDSNFDEFVGFLSRELSVSPNVQLAELTYVNVIEACEYWQNPGDTAKVIPGFSLPIAVEGAEPHKTDFN-QVTYQSVRDDLGIRITIRSGRRAQEPDTALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTNPEIQQKYWQ 777
            FKNPP+ EVV GVYFD  I   K+ H+GLFW  ++D +P  E        P   PL  GS            +PR W    +   L+Q+Q + F  NWR+   +  YP Y  +   F  N +    FL  E     N +  ELTY+N I     W++  D   V    +     +   P     + Q+ +    D+  + + +  G+R Q+    LI    A GL    S  D  +WF  AHE I   F  LT P IQ++ WQ
Sbjct:   23 FKNPPVIEVVCGVYFD-PIKSFKVHHLGLFWQKVKDEFPECEHAVRLGIDPENGPLDLGSY-----------VPRAWFINEEQNRLIQLQDDIFFFNWRKMKEDEPYPRYSTIIEKFKVNLEVLQKFLKEENLGLVNPKACELTYINHIPKGAGWESLRDINGVFRDIAWNSVSKRFLPDPRHISGQIIFPLPDDNGSLTLRLEHGKRKQDDLPVLILHNCARGLGQNKSMEDMWKWFEIAHEWIVRGFADLTTPTIQKEVWQ 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20087.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001552F5898.990e-7243.35TIGR04255 family protein n=1 Tax=Alterinioella nit... [more]
UPI00148773AB1.460e-7043.77TIGR04255 family protein n=1 Tax=Ruegeria sp. HKCC... [more]
UPI001C8DDC171.500e-7043.02TIGR04255 family protein n=1 Tax=Paracoccus yeei T... [more]
A0A6L8CNL8_9GAMM1.950e-6943.02TIGR04255 family protein n=1 Tax=Gammaproteobacter... [more]
A0A6B0YQA3_9CHLR6.590e-6645.08TIGR04255 family protein n=2 Tax=unclassified Cald... [more]
UPI000A0334D64.550e-6542.80TIGR04255 family protein n=1 Tax=Bradyrhizobium di... [more]
A0A6L8EGS2_9GAMM3.020e-6040.15TIGR04255 family protein n=1 Tax=Gammaproteobacter... [more]
A0A840SZ85_9RHOB7.470e-5436.02Uncharacterized protein (TIGR04255 family) n=1 Tax... [more]
A0A7X3WSA0_9BACT6.230e-3332.95TIGR04255 family protein n=1 Tax=Candidatus Poriba... [more]
A0A661TGI7_9DELT2.330e-2831.56Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20087contigP-wetherbeei_contig20087:375..1160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog240292.Ava_3256
Model size786
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.42e-20
EggNOG OGs2E6E7@1|root,3311P@2|Bacteria,1GDDS@1117|Cyanobacteria
Cds size786
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186190.3211439-CDS-P-wetherbeei_contig20087:374..11601683186190.3211439-CDS-P-wetherbeei_contig20087:374..1160Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20087 375..1160 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20087.1.1prot_P-wetherbeei_contig20087.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20087 375..1160 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20087.1.1

>prot_P-wetherbeei_contig20087.1.1 ID=prot_P-wetherbeei_contig20087.1.1|Name=mRNA_P-wetherbeei_contig20087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
MKLKFKNPPINEVVLGVYFDREIVELKLEHVGLFWSLLRDRYPTVEQHPP
VTPPLPFGSQFNTESSAEYFPMPRFWLKAADDRMLVQIQRNAFLQNWRRR
EGRYPHYDAVKACFDSNFDEFVGFLSRELSVSPNVQLAELTYVNVIEACE
YWQNPGDTAKVIPGFSLPIAVEGAEPHKTDFNQVTYQSVRDDLGIRITIR
SGRRAQEPDTALIFELRALGLLGGASKADADEWFIEAHEVIGETFLRLTN
PEIQQKYWQPE*
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mRNA from alignment at P-wetherbeei_contig20087:375..1160-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20087.1.1 ID=mRNA_P-wetherbeei_contig20087.1.1|Name=mRNA_P-wetherbeei_contig20087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig20087:375..1160- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCAAATTCAAAAATCCCCCCATCAATGAAGTTGTTCTCGGCGT CTATTTTGACCGAGAGATAGTGGAATTGAAGCTTGAGCACGTGGGGCTTT TTTGGAGTCTGCTTCGCGACCGGTACCCTACTGTCGAACAACATCCGCCG GTAACACCGCCGCTTCCGTTCGGAAGCCAGTTTAATACTGAGTCGTCTGC AGAATACTTTCCTATGCCTCGTTTTTGGCTGAAGGCTGCCGACGATCGTA TGCTCGTGCAAATTCAGCGAAACGCTTTTCTGCAGAATTGGCGCAGGCGC GAGGGGCGATATCCTCACTACGATGCCGTGAAGGCTTGCTTCGATTCTAA TTTTGACGAGTTTGTTGGTTTCTTATCGCGTGAGTTAAGCGTTTCGCCGA ATGTGCAGCTCGCAGAGCTGACTTATGTCAATGTGATTGAGGCTTGTGAG TACTGGCAGAATCCAGGTGACACCGCGAAGGTAATCCCGGGCTTCAGCTT GCCTATCGCCGTCGAAGGCGCAGAGCCGCATAAGACTGATTTCAACCAAG TCACTTATCAGTCCGTCCGCGATGATCTTGGTATCAGGATTACAATTCGT TCGGGGCGACGGGCACAGGAACCTGATACGGCTCTAATCTTTGAATTGAG GGCGCTGGGCCTCTTAGGTGGCGCAAGCAAAGCTGACGCGGATGAATGGT TCATCGAAGCACATGAGGTCATTGGCGAAACGTTTTTGAGGCTCACAAAT CCTGAGATACAGCAAAAATATTGGCAGCCCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20087:375..1160-

>mRNA_P-wetherbeei_contig20087.1.1 ID=mRNA_P-wetherbeei_contig20087.1.1|Name=mRNA_P-wetherbeei_contig20087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig20087:375..1160- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCAAATTCAAAAATCCCCCCATCAATGAAGTTGTTCTCGGCGT
CTATTTTGACCGAGAGATAGTGGAATTGAAGCTTGAGCACGTGGGGCTTT
TTTGGAGTCTGCTTCGCGACCGGTACCCTACTGTCGAACAACATCCGCCG
GTAACACCGCCGCTTCCGTTCGGAAGCCAGTTTAATACTGAGTCGTCTGC
AGAATACTTTCCTATGCCTCGTTTTTGGCTGAAGGCTGCCGACGATCGTA
TGCTCGTGCAAATTCAGCGAAACGCTTTTCTGCAGAATTGGCGCAGGCGC
GAGGGGCGATATCCTCACTACGATGCCGTGAAGGCTTGCTTCGATTCTAA
TTTTGACGAGTTTGTTGGTTTCTTATCGCGTGAGTTAAGCGTTTCGCCGA
ATGTGCAGCTCGCAGAGCTGACTTATGTCAATGTGATTGAGGCTTGTGAG
TACTGGCAGAATCCAGGTGACACCGCGAAGGTAATCCCGGGCTTCAGCTT
GCCTATCGCCGTCGAAGGCGCAGAGCCGCATAAGACTGATTTCAACCAAG
TCACTTATCAGTCCGTCCGCGATGATCTTGGTATCAGGATTACAATTCGT
TCGGGGCGACGGGCACAGGAACCTGATACGGCTCTAATCTTTGAATTGAG
GGCGCTGGGCCTCTTAGGTGGCGCAAGCAAAGCTGACGCGGATGAATGGT
TCATCGAAGCACATGAGGTCATTGGCGAAACGTTTTTGAGGCTCACAAAT
CCTGAGATACAGCAAAAATATTGGCAGCCCGAGTAG
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