mRNA_P-wetherbeei_contig2000.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A836C8D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D5_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.180e-37 Identity = 115/346 (33.24%), Postives = 167/346 (48.27%), Query Frame = 1
Query: 163 DRQQCLSLRLGLKRHC--------------PPLFAKSGRTFTECTRPPGTYWGAPSPDTTDKELQALREDCRSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPA--MPWSAFARRCGMRGVLGSRD--VVSVPRDTQISTMEQIH-APLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPR---LDDDWQYMPLSDRLSQKAAEIY--RRVAAAGGQQELVCVHVRRGDKVGSPDY-PHLDADTRPDALR-RLLPRLVQPGSSLYIATNEPHPARFFEPLGDVGRM 1122
+R QC+ ++ ++ C P F E PP +PSP AL E CRS++FLLW+RN DY+AGH H++WSM C+ EA +R L++D++A MD +H G VEV + W + +L LPA W F CG GVL VV + RD S ++ PL+++++ + D G + + YG+ C P D ++ +S Q+ AE+ AA LVC+HVRRGDK+ P+Y P+LDA+TRP A+ +LLP V G+ L+IA+NE P FF PL + R+
Sbjct: 84 ERSQCMEVKRYIEERCRNVTELLDPVSCTRKPFFRDKRWMDPEFAHPPSV---SPSP--------ALVESCRSRRFLLWSRNVLDYYAGHGHRTWSMSCAVSEAIASNRTLLWDNYAGMDKVHTGGV----SNVEVLMEHWINVHKLYDLPAGFQLWREFELECGQPGVLDGNQGHVVVMKRDEPFSVLQNYSDIPLVVKDW--DRDCGLYLDNKTPGCI------PLYGYGVCHDPDTPLGPYAQDSFERYLMSAAWVQRTAELIWDAMTVAASDTGNLVCLHVRRGDKIALPEYYPNLDAETRPAAIAAKLLPH-VPGGAILFIASNEDAPG-FFSPLREWYRV 404
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A835Z745_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z745_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.420e-34 Identity = 118/323 (36.53%), Postives = 155/323 (47.99%), Query Frame = 1
Query: 319 LREDCRSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLP--AMPWSAFARRCGMRGVLG--SRDVVSVPRD-TQISTMEQIHAPLLIRNFS-SEGDTGTAVGAMVKCLLSSALSA--SYYGFEAC----------------------MGAGV-PRLDDDWQYMPL---------SDRLSQKAAEIYRRV---------AAAGGQQELVCVHVRRGDKVGSPD----YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEPHPARFFEPLGDVGRMTA 1128
L ++CRSQ+FLLWTRN DY AGHSH ++S+ C+F EA L+R LV D FA ++ LH G G G +VP AW + + L KL M + FAR CG GVL S D V +P T + APLL+R + +GD A L SA A S +GF+ C + G+ R+ +W Y + R AA V AAA +VC+HVRRGDK+ +P+ YP LD DT P + R + V GS+L+IATNE P FF PL R+T+
Sbjct: 313 LVQECRSQRFLLWTRNWLDYNAGHSHTTFSLSCAFWEAQRLNRTLVLDSFAGINKLHFG---GNFHG-DVPYKAWFNPACLSKLDRGGMFYHEFARGCGAPGVLPEESGDAVVMPSGATHAEMLAHADAPLLVRQWQYDQGDYAAAA-------LRSAPDAFTSRFGFQVCHRPERARADYPSVFKEPGVDYALPPGIWSRIYSEWVYRTAKVIAGDLWRTTRARGDAAAAAAAVDSAQHGAAPAAAAVTGMVVCLHVRRGDKITNPNVSKKYPDLDFDTSPAGIYRTISLYVPDGSTLFIATNERDPVAFFRPLEAHYRVTS 624
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A835Z0A5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A5_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.210e-26 Identity = 96/326 (29.45%), Postives = 139/326 (42.64%), Query Frame = 1
Query: 331 CRSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPA--MPWSAFARRCGMRGV-------------------------LGSRDVVS-----------VPRDTQISTMEQIHA--------PLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEAC-----------MGAGVPRLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQE-----LVCVHVRRGDKVGSPD----YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEPHPARFFEPLGD 1110
CRSQ+F+LWTRNS D+ GHSHK +S+ C+F EA +L+R LV D F M +H EVP W+ L++ A M + F R CG GV +G R +++ VP D + HA PLL+R++ + D A A +GF+ C GA P +D + + + ++ R + + + + + C+HVRRGDKV YP+LD DT P+ +RR + + PGS+LY ATN+ FF PL D
Sbjct: 92 CRSQRFMLWTRNSMDHEVGHSHKWYSLHCAFWEAYSLNRTLVLDSFLGMSRIHADED----YNAEVPYPVWYSTKGLERARAGAMFYHDFVRDCGAPGVFHVLSSLVAVLSVCTXXXXXXXXXXVGGRGILATASGAATAAAAVP-DVALMPSGSTHADMAARADVPLLVRHWDHD-DRSNATR-----------PAFRFGFQVCHPPETADARYPTGAREPGVDYSFPRKLWGKKYAPWVYDMARYILSDMWKDKKPGLKIACIHVRRGDKVELESQKQRYPNLDYDTSPEGIRRTIKPWLNPGSTLYFATNQKDAKAFFAPLED 400
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A836CEQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ0_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.360e-20 Identity = 83/255 (32.55%), Postives = 114/255 (44.71%), Query Frame = 1
Query: 409 MECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPA--MPWSAFARRCGMRGVLGSR--DVVSVPRDTQISTM-EQIHAPLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPRLDDDWQYMPLSDRLSQK--AAEIYRRVAA------------AGGQQELVCVHVRRGDKV----GSPDYPHLDADTRPDALRRLLPRLVQPGSSLYIATNEPHPARFFEPL 1104
M C+F EA L+R LV D FA M H + VE P AW+ LPA M + F ++CG GVL DVV +P + M Q APLL+R + + + + +G + C P ++ L D+L K A +YR V + A +VC+HVRRGDK+ G YP+LD +T P+ + + + V GS LYIATN+ P FFEPL
Sbjct: 1 MSCAFWEANALNRTLVIDSFAGMFKGHTQTE----FSVEAPFAAWYSVKVFDLLPAGGMLYHQFVQKCGAPGVLQQALGDVVIMPSGASHADMVAQAGAPLLVREWDQREQQLEPATPLDE-------QQAKFGLQVCHKK--PEQQEEGLDYSLPDKLWSKWYAKWVYRAVDSIMSDMRQAAELNAASNALVVCLHVRRGDKITSRIGQFRYPNLDYETSPEGILKAIELFVPHGSVLYIATNQEDPVAFFEPL 242
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A836CHA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA1_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.130e-20 Identity = 86/296 (29.05%), Postives = 126/296 (42.57%), Query Frame = 1
Query: 325 EDCRSQKFLLWTRNSGDYWAGHSHKSWSMECSF-------GEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLP--AMPWSAFARRCGMRGVL--GSRDVVSVPRDTQISTMEQIHA--------PLLIRNFSSEG------DTGTAVGAMVKCLLSSALSASY--------------YGFEACMGAGVP-----------------------RLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQELVCVHVRRGDKVGSPD----YPHLDADTRPDAL 1014
E+CR++++LLWTRN+ D++AGH HK +S+ C+ EA L R LV D F +D H+G + +VP AW++ + + LP + W F + CG G+L GS DV D + HA PLL+R + + T + + + + +++ + YG++ C VP R DW Y L AE AA G Q +VCVHVRRGD V +P YP LD DT +A+
Sbjct: 195 EECRAKRYLLWTRNTLDFFAGHQHKWFSLSCALFXXXXXLWEAHRLGRTLVLDSFTGIDKTHIGGE----YHADVPFTAWYNSNAMAGLPQGGLFWHEFVQGCGAPGILQEGSGDVAVGTGDVAVVPPSASHADMLAHAGVPLLVREWDASALRRSATTTASLTDSSGRPDMRGSVTTTMPPXXXXXXXXXXXXYGYQVCHRPDVPSARWPKVVSEPGVDYSMPEGLKSRPYADWVYSTTRAMLDDLKAE----GAALGAQ--VVCVHVRRGDMVRAPGMRARYPSLDRDTFAEAI 480
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A835ZJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.900e-18 Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 592 FARRCGMRGVL--GSRDVVSVPRDTQISTME-QIHAPLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVP-RLDDDWQYMPLSDRLSQKA-AEIYRRVAAAGGQQELV-CVHVRRGDKVGSPDYPHLDADTRPDALRRLLPRLVQPGSSLYIATNEPHPARFFEPL 1104
FAR CG GVL ++D+ +P S M + H PLL+R++ G + C SA + S G + + AG+ R Y P DR++ + AE+ +R A + LV C+HVRRGDK+ YP+L+ +T P+ + + + V GS LY+ATNEP P +FEPL
Sbjct: 18 FARECGAPGVLQEANQDLAIMPSGASHSDMAAKAHVPLLVRSWDQGLQPAEKYGYRI-CRHRSAAAQSESGVDYTLPAGLGGRAYAPHAYAPWVDRMTARVWAELQKRAALNAREDALVVCLHVRRGDKLSYTKYPNLNYETSPEGILKTIEPHVPHGSVLYLATNEPDPVAYFEPL 193
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A2R6QTQ8_ACTCC (O-fucosyltransferase family protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QTQ8_ACTCC) HSP 1 Score: 84.0 bits (206), Expect = 2.790e-13 Identity = 76/262 (29.01%), Postives = 111/262 (42.37%), Query Frame = 1
Query: 334 RSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPAM-----------PWS-AFARRCGMRGVLGSRDV-VSVPRDTQISTMEQIHAPLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPRLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQELVCVHVRRGDKVGSPD-YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEP 1077
R K+L ++R GDY G +H WS C+ GEA L+R LV D + + G K +EG + + D L++ ++ W A ++ +R V S+ + + +D Q AP E D Y + C G ++ W + S RL +EI R+ + VHV RG+K + + +PHLDADT PDAL L +VQP +LYIATNEP
Sbjct: 251 RKGKYLYYSRG-GDYCKGMNHYLWSFLCALGEAQYLNRTLVMDLSICLAATYTGSKKD-EEGKDFRF--YFDFEHLKEEASIVEEGEFVGDWKKWDKAHKKKIPVRKVASSKVTPMQLKKDKSTIIWRQFDAP--------EPDN--------------------YWYRVCEGQAAKYIERPWHTLWKSKRLMNIVSEISGRM-----DWDFDAVHVVRGEKAQNKELWPHLDADTSPDALVPKLQGMVQPWRNLYIATNEP 475
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A0D2UDF7_GOSRA (O-fucosyltransferase family protein n=29 Tax=Malvaceae TaxID=3629 RepID=A0A0D2UDF7_GOSRA) HSP 1 Score: 81.6 bits (200), Expect = 1.500e-12 Identity = 70/251 (27.89%), Postives = 103/251 (41.04%), Query Frame = 1
Query: 334 RSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPAMPWSAFARRCGMRGVLGSRDVVSVPRDTQISTMEQIHAPLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPRLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQE--LVCVHVRRGDKVGSPD-YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEP 1077
R K+L + R GDY G +H WS C GEA L+R V D + + P ++ + D L+++ ++ + R + G + V V + T P+ ++ D T + A Y + C G + W + S RL EI GQ + VHV RG+K + + +PHLDADT PDAL L ++QP +LYIATNEP
Sbjct: 250 RKGKYLYYARG-GDYCKGMNHYLWSFLCGLGEAMYLNRTFVMDLSVCLSATY---NPSNRDEEGKDFRFYFDFEHLKEVASVVEESEFLRGWKKWNRGRKRKVPVKKVTTYKV-----TPMQLKK-----DKSTIIWRQF-----DAPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEI-------SGQMDWDFDAVHVVRGEKAQNKELWPHLDADTSPDALLTKLKEMIQPWRNLYIATNEP 474
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: UPI000B8CD258 (uncharacterized protein LOC110809515 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CD258) HSP 1 Score: 80.1 bits (196), Expect = 4.600e-12 Identity = 72/254 (28.35%), Postives = 108/254 (42.52%), Query Frame = 1
Query: 334 RSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKL-PAMPWSAFARRCGMRGVLGSRDV-VSVPRDTQISTMEQIH--APLLIRNFSS-EGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPRLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQELVCVHVRRGDKVGSPD-YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEP 1077
R ++L ++R GDY G +H WS C GEA L+R V D + + P K+ + D L+++ P + F R R V V + +++ M+ + + +L R F + E D Y + C G + W + S RL +EI R+ + VHV RG+K + + +PHLDADT PDAL L ++QP +LYIATNEP
Sbjct: 249 RKGRYLYYSRG-GDYCKGMNHYLWSYLCGLGEAIYLNRTFVMDLSVCLSATY---NPSNKDEDGKDFRFYFDFEHLKEVVPIVEDREFLRDWKKWDRTHKRKVPVKKVKTYKVTPMQLMKDKSTILWRQFDAPEPDN--------------------YWYRVCEGEAAKYIQRPWHALWKSKRLMNIVSEISGRM-----DWDFDAVHVVRGEKAQNKELWPHLDADTSPDALLAKLKEIIQPWRNLYIATNEP 473
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Match: A0A834G025_RHOSS (O-fucosyltransferase family protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834G025_RHOSS) HSP 1 Score: 79.7 bits (195), Expect = 6.060e-12 Identity = 73/253 (28.85%), Postives = 103/253 (40.71%), Query Frame = 1
Query: 328 DCRSQKFLLWTRNSGDYWAGHSHKSWSMECSFGEAANLSRVLVYDDFAAMDGLHVGRKPGPKEGVEVPIGAWHDDSELQKLPAMPWSAFARRCGMRGVLGSRDVVSVPRDTQISTMEQIHAPLLIRNFSSEGDTGTAVGAMVKCLLSSALSASYYGFEACMGAGVPRLDDDWQYMPLSDRLSQKAAEIYRRVAAAGGQQE--LVCVHVRRGDKVGSPD-YPHLDADTRPDALRRLLPRLVQPGSSLYIATNEP 1077
D R K+L ++R GDY G +H WS C+ GEA L+R V D + H K +EG + ++D L++ S D + Q+ + A + + D T + A Y + C G + W + S RL +EI GQ + VHV RG+K + + +PHLDADT PDAL L +VQP +LYIATNEP
Sbjct: 244 DFRKGKYLYYSRG-GDYCKGMNHYLWSFLCALGEAQYLNRTFVMDLSICLSATHTASKKD-EEGKDFRF--YYDFEHLKEA-----SEIVEEGEFLKDWKKWDNTHKKKKIQVRKV----ASYKVTPMQLKKDKSTIIWRQF-----DAPEPENYWYRVCEGQAANYIQRPWHALWKSKRLMNIVSEI-------SGQMDWDFDAVHVVRGEKAQNKELWPHLDADTWPDALVTKLQGIVQPWRNLYIATNEP 471 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2000.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2000.1.1 >prot_P-wetherbeei_contig2000.1.1 ID=prot_P-wetherbeei_contig2000.1.1|Name=mRNA_P-wetherbeei_contig2000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp MWEDRQQCLSLRLGLKRHCPPLFAKSGRTFTECTRPPGTYWGAPSPDTTDback to top mRNA from alignment at P-wetherbeei_contig2000:1966..6317- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2000.1.1 ID=mRNA_P-wetherbeei_contig2000.1.1|Name=mRNA_P-wetherbeei_contig2000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4352bp|location=Sequence derived from alignment at P-wetherbeei_contig2000:1966..6317- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2000:1966..6317- >mRNA_P-wetherbeei_contig2000.1.1 ID=mRNA_P-wetherbeei_contig2000.1.1|Name=mRNA_P-wetherbeei_contig2000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig2000:1966..6317- (Phaeothamnion wetherbeei SAG_119_79)back to top |