mRNA_P-wetherbeei_contig20.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE) HSP 1 Score: 143 bits (360), Expect = 6.600e-34 Identity = 127/384 (33.07%), Postives = 169/384 (44.01%), Query Frame = 1
Query: 10 LDSANAEYAKEVVTWVAPDNNVVLSDEARASIAALDDHAVEDTDGARFERMLAAFVALPGEERQRIGVD-RLLTLEPL-ERLAALDELWKRRQEELQEATDAMVKPAELLKSRIAVLHASRGAGNSSSDNASPSVATMVGVCIASSTNATACAASRASDAAAKTRGLASKRPHQPPQSHKERLXXXXXXEDLLSDVDMARDFHTLGGWDELVAHLAADTPNDARTMAAWAVGTAIKNMPEFQLWALEPAAAAGGRTALELLIDSLSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKPDYYAGAAKTVYALSAALGNNVALQRAFGAFQGPRALARLFVAVGTGGSGGKEALRLRVRLLTFVADLLGECER 1155
+ S + E + + W D LS EA ASIA LDDH +ED D AR +RMLAA ++P ERQ + +D L +PL ERLA L LW+ RQ+EL+EA DAM K ELL RI +L+ NA + + G EDLLSD+DMARDFHT+GG+ L + L P R +AAWAVGTA+KN PE QLW LE + + L LL+++ +A +K VYALSA L NN +Q FG+ G L+ ++ A G+ R+R++ LT ++DLL E R
Sbjct: 24 MSSVSMESTDDTIMWSPFD----LSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILN-----------NADATDGALTGA--------------------------------------------LTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQP-SVLALLLENAMAATTPTLR-------------------------------------------SKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSD-------RRVRIKTLTLMSDLLQEAAR 297
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.680e-25 Identity = 90/222 (40.54%), Postives = 109/222 (49.10%), Query Frame = 1
Query: 100 SIAALDDHAVEDTDGARFERMLAAFVALPGEERQRIGVDRLLTLEPLERLAALDELWKRRQEELQEATDAMVKPAELLKSRIAVLHASRGAGNSSSDNASPSVATMVGVCIASSTNATACAASRASDAAAKTRGLASKRPHQPPQSHKERLXXXXXXEDLLSDVDMARDFHTLGGWDELVAHLAADTPNDARTMAAWAVGTAIKNMPEFQLWALE--PAAAA 759
SI +DDH V+DT AR +RML A + LP EE++R+ +D +L L+P ER AL LW+RRQ EL+E M PA++L S IA+L S AS A L ED LSDVDMARDFHTLGGW L A L A+ R AAW +GTA+KN+ EF WALE PAAAA
Sbjct: 98 SIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLDAILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILR------------------------------------SEASGDAVL-------------------LDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAA 264
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 6.230e-14 Identity = 86/276 (31.16%), Postives = 135/276 (48.91%), Query Frame = 1
Query: 10 LDSANAEYAKEVVTWVAPDNNVVLSDEARASIAALDDHAVEDTDGARFERMLAAFVALPGEERQRIGVDRLLTLEPLE----RLAALDELWKRRQEELQEATDAMVKPAELLKSRIAVLHASRGAGNSSSDNASPSVATMVGVCIASSTNATACAASRASDAAAKTRGLASKRPHQPPQSHKERLXXXXXXEDLLSDVDMARDFHTLGGWDELVAHLAADTPNDARTMAAWAVGTAIKNMPEFQLWALE-PAAAAGGRTAL-----ELLIDSLSSA 807
++S +A + V T + + + E +IA D + E +L AF LPG+E +R+ +D LT +P+ L E WKRRQ EL++A ++ AE + + L+ + A PSV + + + T A + +T+ +A + +++ E LL DVD ARDFHT+GGW L++HL A P R++AA AVGTAIKN ++QLW LE PA++ AL +LLI++L ++
Sbjct: 60 MNSVSAIHENTVATAMLNEMKTLAPTELSTNIAEQD----------KIEAILKAFHRLPGQELERLQID--LT-QPVTAGTPEAELLFEAWKRRQAELKDAMKNILNAAEYMTNITRTLNGT----------ALPSV--RYAMVHNTPIDVTLDLAPPGDASTTETKQVAD-------LTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTS 303
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.690e-9 Identity = 61/223 (27.35%), Postives = 86/223 (38.57%), Query Frame = 1
Query: 154 ERMLAAFVALPGEERQRIGVDRLLTLEPLERLAALDELWKRRQEELQEATDAMVKPAELLKSRIAVLHASRGAGNSSSDNASPSVATMVGVCIASSTNATACAASRASDAAAKTRGLASKRPHQPPQSHKERLXXXXXXEDLLSDVDMARDFHTLGGWDELVAHLAADTPNDARTMAAWAVGTAIKNMPEFQLWALE----PAAAAGGRTALELLIDSLSSAA 810
E M + + LP E R GV P +D +W++RQ++L+EA ++M + RI VL A+ S ++ + ED L D+DMARDFHT+GGW L LA D R AA VG ++N PEFQ W E AA T + LL+ ++S+A
Sbjct: 100 EMMKESLLKLPDAELARYGVTHAELSTPGAWEDRIDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADS-------------------------------------------------------SEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSA 267
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A7S1VHQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VHQ6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.870e-9 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 580 LSDVDMARDFHTLGGWDELVA------HLAADTP---------NDARTMAAWAVGTAIKNMPEFQLWALEPAAAAGGRT-ALELLIDSL 798
L+D+DM RDFHTLGGW LV+ HLA+++ D + AAWA+GTA+KN EF +A+E G +T AL +L+ L
Sbjct: 10 LNDLDMTRDFHTLGGWPLLVSLLSPGVHLASNSTLTDEHLAASRDVQAKAAWAIGTAVKNTEEFFPYAIEEVTVGGSKTSALAMLLQQL 98
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A7S1D1L1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1L1_CYCTE) HSP 1 Score: 65.1 bits (157), Expect = 2.250e-8 Identity = 41/87 (47.13%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 580 LSDVDMARDFHTLGGWDELVAHL--------------AADTPNDARTMAAWAVGTAIKNMPEFQLWALEPAAAAGG---RTALELLI 789
LSDVDM RDFHTLGGW LV+ L D + AAWAVGTA+KN EF +A+EP + GG TAL LL+
Sbjct: 42 LSDVDMTRDFHTLGGWPLLVSLLHDGSHACNQTLTRPLRDAIQSVQLHAAWAVGTAVKNTGEFYPFAIEPISIGGGGETTTALHLLL 128
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 8.960e-7 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 571 EDLLSDVDMARDFHTLGGWDELVAHLA----ADTPNDARTMAAWAVGTAIKNMPEFQLWALEPAAAAGGRTALELLI 789
ED LSDVDMA+DF+TLGGW LV+ L + + + AAW VG A+KN FQ W LE GG +AL L+
Sbjct: 278 EDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLE-GGKEGGASALTRLL 353
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: A0A7S2L5H0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L5H0_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.010e-6 Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 580 LSDVDMARDFHTLGGW--------DELVAHLAADTPNDA--------RTMAAWAVGTAIKNMPEFQLWALE 744
LSDVDMARDFHTLGGW D L AH D ND R +AA +GTA+ N+ EF+ WALE
Sbjct: 125 LSDVDMARDFHTLGGWPYLIALLDDTLHAHNDDDDVNDEIRALVDEIRALAATTIGTAVSNLGEFRHWALE 195
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: B8CEM4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEM4_THAPS) HSP 1 Score: 61.2 bits (147), Expect = 3.970e-6 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 580 LSDVDMARDFHTLGGW-------DELVAHLAADTPN------DARTMAAWAVGTAIKNMPEFQLWALE 744
LSDVDMARDFHTLGGW D+ V +A D + + +T+AA +GTA+ N+ EF+ WALE
Sbjct: 358 LSDVDMARDFHTLGGWPYLVMLLDDRVHQVAGDDAHSEALVYEIQTLAAMTIGTAVGNLEEFRTWALE 425
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Match: B7FVZ2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVZ2_PHATC) HSP 1 Score: 60.8 bits (146), Expect = 4.500e-6 Identity = 37/80 (46.25%), Postives = 42/80 (52.50%), Query Frame = 1
Query: 571 EDLLSDVDMARDFHTLGGWDELVAHLAAD---------TPNDARTM-------------AAWAVGTAIKNMPEFQLWALE 744
ED L D+DMARDFHTLGGW LVA + D +PN T AAW +GTA+KN EF WALE
Sbjct: 232 EDQLVDLDMARDFHTLGGWPVLVALVTDDAHQPPFWQQSPNQTDTSTETASHVRSIQAHAAWVLGTAVKNTGEFAPWALE 311 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20.6.1 >prot_P-wetherbeei_contig20.6.1 ID=prot_P-wetherbeei_contig20.6.1|Name=mRNA_P-wetherbeei_contig20.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp MLAAFVALPGEERQRIGVDRLLTLEPLERLAALDELWKRRQEELQEATDAback to top mRNA from alignment at P-wetherbeei_contig20:17864..19579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20.6.1 ID=mRNA_P-wetherbeei_contig20.6.1|Name=mRNA_P-wetherbeei_contig20.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1716bp|location=Sequence derived from alignment at P-wetherbeei_contig20:17864..19579+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20:17864..19579+ >mRNA_P-wetherbeei_contig20.6.1 ID=mRNA_P-wetherbeei_contig20.6.1|Name=mRNA_P-wetherbeei_contig20.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig20:17864..19579+ (Phaeothamnion wetherbeei SAG_119_79)back to top |