mRNA_P-wetherbeei_contig19957.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: A0A2G8JF48_STIJA (Putative transposon Ty3-I Gag-Pol polyprotein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JF48_STIJA) HSP 1 Score: 119 bits (299), Expect = 3.860e-29 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLSCARP--YIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+GG+ FS DL HGYF V MK EDIPKTA P+GL+E+ R PQG+C +PS F RLM+ + L+ ++ Y+DD LV++ D+H+D L V KR+ HGLKL K H+ + EV LGH
Sbjct: 88 LGGAKFFSSLDLAHGYFQVAMKEEDIPKTAFRVPWGLYEFNRMPQGLCNSPSTFQRLMELIFGDLNMSQLVLYLDDILVYSTTFDQHLDRLGNVFKRLIHHGLKLKGEKCHLFQAEVHHLGH 209
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: K7EWR6_PELSI (Ribonuclease H n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EWR6_PELSI) HSP 1 Score: 117 bits (292), Expect = 2.850e-28 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEG--LSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+G + FS DL GYF V M+ +D KTA+ TPFGLFE+ R P G+C AP+ F RLM+ VL L Y+DD +V +K + HI+ LD V R+K HGLKL PSK + R+ V+FLGH
Sbjct: 121 LGSARVFSTLDLTSGYFQVAMEEQDQEKTAVTTPFGLFEWTRMPFGLCNAPATFQRLMEGVLGDYILDTLLIYLDDVIVFSKDFESHIEKLDVVFTRLKEHGLKLKPSKCCLLRERVKFLGH 242
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: A0A3P8QK96_ASTCA (Ribonuclease H n=4 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3P8QK96_ASTCA) HSP 1 Score: 115 bits (289), Expect = 1.300e-27 Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 DVGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
++ G+ FS DL+ GY V ++PED+PKTA+ITPFGLFE+LR P G+ GA F RLMD VL GL Y+DD LV + +H L V +R++AHGL ++PSK G + FLGH
Sbjct: 57 NLAGTSIFSKIDLVRGYHQVPVRPEDVPKTAVITPFGLFEFLRMPFGLKGAAQTFQRLMDSVLRGLPFVFVYLDDILVASCSASQHESHLRQVFQRLEAHGLIINPSKCQSGLPVLDFLGH 177
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: A0A0P4VWC7_SCYOL (RNA-directed DNA polymerase n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VWC7_SCYOL) HSP 1 Score: 115 bits (289), Expect = 1.330e-27 Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEG--LSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLG 360
+ G+ FS FDL GY ++++ ED PKTA +TPFG ++Y+RCP G+ +P+ F R M+ V Y+DD LV + VD+H+D L+ +LK ++ HGLKL PSK HI + +VR+LG
Sbjct: 374 LAGAQYFSSFDLAAGYHQILVRAEDRPKTAFVTPFGHYQYVRCPMGLSNSPATFQRFMEYVFSDQVFVTLLVYLDDLLVFARSVDEHLDRLEGMLKLLRKHGLKLKPSKCHILKPQVRYLG 494
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: UPI001EECEA55 (uncharacterized protein LOC124393547 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EECEA55) HSP 1 Score: 115 bits (287), Expect = 1.790e-27 Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLS--CARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+G + FS DL GYF V M +D KTA+ TPFGLFE+ R P G+C AP+ F RLM+ VL L+ Y+DDA+V +K + H + L+ V R++ HGLKL PSK + R EV+FLGH
Sbjct: 452 LGNAKLFSTLDLTAGYFQVAMSDKDREKTAVTTPFGLFEWSRMPFGLCNAPATFQRLMEVVLGALTFDVLLVYLDDAIVFSKDFESHCERLELVFNRLRQHGLKLKPSKCFLLRAEVKFLGH 573
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: Q4SV63_TETNG (Ribonuclease H n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SV63_TETNG) HSP 1 Score: 115 bits (287), Expect = 2.480e-27 Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+ G+ FS DL+ GY V ++ ED+PKTA+ITPFGLFE+LR P G+ GA F RLMD VL GL+ Y+DD LV + D+H+ L V +R+ HGL ++P+K G + + FLGH
Sbjct: 477 LAGATIFSKVDLVRGYHQVPVRAEDVPKTAVITPFGLFEFLRMPFGLKGAAQTFQRLMDSVLRGLTFVFVYLDDILVASPSADEHLTHLGQVFQRLADHGLIVNPAKCQFGLQVIDFLGH 596
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: H3CMX8_TETNG (Ribonuclease H n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CMX8_TETNG) HSP 1 Score: 115 bits (287), Expect = 2.490e-27 Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+ G+ FS DL+ GY V ++ ED+PKTA+ITPFGLFE+LR P G+ GA F RLMD VL GL+ Y+DD LV + D+H+ L V +R+ HGL ++P+K G + + FLGH
Sbjct: 530 LAGATIFSKVDLVRGYHQVPVRAEDVPKTAVITPFGLFEFLRMPFGLKGAAQTFQRLMDSVLRGLTFVFVYLDDILVASPSADEHLTHLGQVFQRLADHGLIVNPAKCQFGLQVIDFLGH 649
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: A0A433TB03_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433TB03_ELYCH) HSP 1 Score: 113 bits (283), Expect = 3.310e-27 Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLSCARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+ G + FS DL+ GY + + PED+PKTA+ITPFGL+E+LR P G+ A F RLMD VL+ L CA Y+DD LV + H D L+AV +R++ HGL + K G + FLGH
Sbjct: 321 LAGKNIFSKIDLVRGYHQIPVAPEDVPKTAVITPFGLWEFLRMPFGLKCAAQSFQRLMDTVLQDLDCAFVYLDDILVASSSAQSHFDDLNAVFQRLRHHGLVIKLEKCLFGVSSLDFLGH 440
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: UPI002013E03B (uncharacterized protein LOC125277609 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013E03B) HSP 1 Score: 114 bits (286), Expect = 3.380e-27 Identity = 60/122 (49.18%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLS--CARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+G + FS DL GYF V M ED KTA+ TPFGLFE+ R P G+C AP+ F RLM VL L+ Y+DD +V +K D H L+ V R++ HGLKL PSK I + EV+FLGH
Sbjct: 1022 LGNAQLFSTLDLTSGYFQVAMSEEDRAKTAITTPFGLFEWTRMPFGLCNAPATFQRLMGVVLGDLTFDILLIYLDDIIVFSKDFDSHCQRLETVFNRLRQHGLKLKPSKCFILKPEVKFLGH 1143
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Match: UPI000CE1F156 (uncharacterized protein LOC111946903 n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F156) HSP 1 Score: 114 bits (285), Expect = 4.550e-27 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 4 VGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGAPSHFSRLMDRVLEGLS--CARPYIDDALVHTKGVDKHIDALDAVLKRVKAHGLKLSPSKVHIGRKEVRFLGH 363
+G + FS DL GYF V M ED KTA+ TPFGLFE+ R P G+C AP+ F RLM VL LS Y+DD LV+++ + H + L V +R++ HGLKL PSK + R EV+FLGH
Sbjct: 799 LGDAHLFSTLDLTAGYFQVAMNEEDQGKTAVTTPFGLFEWTRMPFGLCNAPATFQRLMGLVLGDLSFDILLVYLDDILVYSRDFESHCERLGLVFQRLRQHGLKLKPSKCFLLRPEVKFLGH 920 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19957.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19957.1.1 >prot_P-wetherbeei_contig19957.1.1 ID=prot_P-wetherbeei_contig19957.1.1|Name=mRNA_P-wetherbeei_contig19957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp DVGGSDTFSVFDLLHGYFNVIMKPEDIPKTAMITPFGLFEYLRCPQGVCGback to top mRNA from alignment at P-wetherbeei_contig19957:892..1254+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19957.1.1 ID=mRNA_P-wetherbeei_contig19957.1.1|Name=mRNA_P-wetherbeei_contig19957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig19957:892..1254+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19957:892..1254+ >mRNA_P-wetherbeei_contig19957.1.1 ID=mRNA_P-wetherbeei_contig19957.1.1|Name=mRNA_P-wetherbeei_contig19957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig19957:892..1254+ (Phaeothamnion wetherbeei SAG_119_79)back to top |