mRNA_P-wetherbeei_contig1993.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1993.3.3
Unique NamemRNA_P-wetherbeei_contig1993.3.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A6H5K2C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C6_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 1.990e-78
Identity = 135/242 (55.79%), Postives = 168/242 (69.42%), Query Frame = 3
Query:   42 IAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSE---------LSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYY 740
            IA+Y++ SG+KKKSL++ GA AAFFVG  S  +S R G T+I FYKSSSILTK G  +K  L DDY+EGGQR A QVLSCSLFAT+LA+Y  +  G  D+ +DF  DPL   LLCAY+ FYA C GDTWSSELG+LS++PPRLI  P+++VP GTNGG+S +GTVA+AA G+ +G  F   G V     P    +S               QLPL+ LG +SGL GS+LDS MGA+LQASY+
Sbjct:   20 IASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRFGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVYHTVVTGAGDSLVDFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASAAAGVVMGAGFVCFGWVFRLSPPSPAGHSSPXXXXXXXXXXXXXQLPLVLLGGVSGLAGSILDSLMGAVLQASYF 261          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A7S2V002_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V002_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.080e-77
Identity = 147/287 (51.22%), Postives = 183/287 (63.76%), Query Frame = 3
Query:   51 YLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLG--MSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLF 905
            YL +SG+KK+SLS+ GA AAFFVG  S  +SAR G T+I FYKSSSILTK G  +K  L D +   GQR+A QVLSCS  A ++A+  +   G  M    +++   P  S LLCAY+  YA CNGDTWSSELG+LSRSPP LI  P+R+VP GTNGGVS +GT+AA A G+ IG  F L G + G   P DG         Q  L+  G + GLLGS+LDS MGA LQA+YY  E+ CI S     E K   V RVCG D LTN+QVN +S +V ++  G +   +F
Sbjct:   22 YLVFSGLKKRSLSRSGACAAFFVGLVSLSISARLGLTLILFYKSSSILTKVGQKKKAQLDDHHVTDGQRTATQVLSCSGIACVVAVIMYYLEGEDMLAMGVNYSSHPTTSFLLCAYLGHYACCNGDTWSSELGVLSRSPPILITQPWRTVPAGTNGGVSTMGTLAAGAAGVVIGAGFLLFGWMQGA--PQDG---------QYLLIPFGGMCGLLGSMLDSLMGATLQATYYDREKKCITSK---VEGKSSDVVRVCGYDILTNEQVNLLSVLVTTIGSGYMGALMF 294          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A7S2RII1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RII1_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.150e-75
Identity = 143/285 (50.18%), Postives = 185/285 (64.91%), Query Frame = 3
Query:   18 LKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVS 872
            L+   AA +A  L + G++KKSLS  GAAAA  VGF SFL S R G  +IAFY+SSS LTK    +K+ L   Y+EGGQR A QV SCSL AT++A+   L  G  D  +D    P+ S LLCAY+  YA CNGDTW+SELG L    PRL+L P+R VP+GTNGG+S LGT A+ AGGLFIGL F +            G +S    PSQLPL+ALGA  G +GS++DS +GA LQA++Y  E+  IV + +A++  D  V R+ G D L+N+QVNA+S  + +
Sbjct:    4 LRAVVAAAVAGLLGWRGLRKKSLSPSGAAAAVLVGFLSFLASFRFGLVLIAFYQSSSSLTKFQGERKRRLEAGYKEGGQRDAEQVFSCSLLATVMAVVFLLTQG-EDQPVDSAAAPMRSALLCAYLGHYACCNGDTWASELGTLDSGLPRLVLAPWRKVPKGTNGGMSFLGTAASLAGGLFIGLVFVVC-----------GPHSSPGAPSQLPLIALGAAGGFVGSLIDSFLGATLQATFYHREKRIIVPS-SASDNAD--VDRITGVDILSNEQVNALSVAITT 273          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: K8YV45_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV45_NANGC)

HSP 1 Score: 220 bits (561), Expect = 1.890e-66
Identity = 138/300 (46.00%), Postives = 183/300 (61.00%), Query Frame = 3
Query:   18 LKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSV-PRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKD-GA--VRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLF 905
            + L  A   A  L+Y G++K SLSK GA AA+ VGF S   S R G  MI FY+SSS+LT+     K LL +D+++GGQRSA QVL+CS   TL+A+     LG  D  ++F   PL S LLCAYV  YA CNGDTW+SE+GILS S PRL+   FR V PRGTNGG+S  GT+A+ AGG  IG    +LG V G  +P D + +   P     +  +GA  G +GS+ DS +G + QA++Y  E+  +V  PTA E +  GA  VR + G D L+N+ VN IS  + +    +L R L+
Sbjct:   29 INLVMATIFATTLSYRGLRKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLG--MPDDASGAGWCP-GWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 325          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: M4C455_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C455_HYAAE)

HSP 1 Score: 216 bits (550), Expect = 2.140e-65
Identity = 131/291 (45.02%), Postives = 172/291 (59.11%), Query Frame = 3
Query:   33 AACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLF 905
            AA +A +L   G+KK+SL   GAAAA  VGFF+     R G  ++ FY S S LTK   + K+ L  +Y++GGQRSA QVL+CSL ATL+A+Y  ++ G  D  +DF   P  S LL +Y+  YA C  DTW+SELG+LS+S PRLI+  ++ VP GTNGGVS LG   +A GG FIG  +F                S LS  +QL ++ LGA++GL GS LDS +GA LQA+YY      I       E        +CGR WL+N+QVN +S +V +   G LA  LF
Sbjct:   11 AALLAGWLGRRGLKKQSLDVSGAAAACCVGFFTLASGYRFGVLLLGFYFSGSKLTKVRASVKQQLDANYKQGGQRSARQVLACSLVATLIAVYFVVRFGHDDVALDFESAPESSFLLASYIGHYACCAADTWASELGVLSKSEPRLIMT-WKRVPPGTNGGVSVLGLAVSALGGAFIGALYF--------------ATSLLSGTAQLHVVTLGAVTGLFGSALDSILGATLQATYYDRATRKICDEAPHVE-------HICGRKWLSNEQVNVVSTLVTTAVSGALATYLF 279          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A6A3M413_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M413_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.270e-65
Identity = 135/294 (45.92%), Postives = 175/294 (59.52%), Query Frame = 3
Query:   33 AACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYY--SDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLFP 908
            AA +A  L + G+KK+SL   GAAAA FVGFF+     R+G  ++ FY S S LTK   + K+ L  +Y+ GGQRSA QVL+CSL AT +A+Y  L+ G  DA +DF   P  S LL +++  YA C  DTW+SELG+LS+S PRLI    R VP GTNG VSALG   +A GG FIG   +   + SG               +QL ++ LGA SGL GSVLDS +GA +QA+Y+  S  R C    P A         RVCG D+LTN+QVN +S +  +   G++A  LFP
Sbjct:   11 AALLAGGLGHRGLKKQSLDVSGAAAACFVGFFTLASGYRYGLLLLGFYFSGSKLTKVRASIKQQLDANYKPGGQRSARQVLACSLLATCIAVYAVLQFGDEDAALDFETAPARSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRRVPPGTNGAVSALGLAMSALGGAFIGALHYAASLPSGT--------------AQLQVVTLGAASGLFGSVLDSLLGATVQATYFDRSTRRICDELTPHA--------ERVCGLDFLTNEQVNLVSVLATTAVSGVVATYLFP 281          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A3F2RXA6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXA6_9STRA)

HSP 1 Score: 212 bits (539), Expect = 9.920e-64
Identity = 132/297 (44.44%), Postives = 173/297 (58.25%), Query Frame = 3
Query:   18 LKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLFP 908
            ++L  AA +AA LA  G+KKKSL   GA AA FVGF +   S R G  ++ FY S S LTK   + K+ L  +Y+ GGQRSA QVL+CSL AT +A+Y +L+ G  D  IDF      S LL +Y+  YA C  DTW+SELG+LS+S PRLI    R VP GTNG VS LG   +A GG FIG+ ++                S LS  +Q  ++ LGA++GL GSV DS +GA +QA+Y+      I           G V  VCG D L+N+QVN +S +V +   G++A  LFP
Sbjct:    3 VRLLVAALVAAALARRGLKKKSLDVSGAIAASFVGFLTLSSSYRFGVLLLGFYFSGSKLTKVRSSVKQQLDANYKPGGQRSAGQVLACSLLATFIAVYTFLQFGDDDVPIDFTAAKAHSYLLASYIGHYACCAADTWASELGVLSQSKPRLITT-LRRVPPGTNGAVSVLGLAVSALGGTFIGVLYY--------------AGSLLSGSAQAQVITLGAVTGLFGSVFDSVLGATVQATYFDRASRKICDESAVG----GDVEHVCGVDLLSNEQVNVVSVLVTTAISGVVATYLFP 280          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: A0A5D6XQ07_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ07_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.230e-63
Identity = 134/292 (45.89%), Postives = 174/292 (59.59%), Query Frame = 3
Query:   18 LKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLA 893
            L++  A  +AA L   G++K+SL   GA AAF VGFFS     R G  ++ FY S S LTK   A K+ L  +Y+ GGQRSA QVL+CS  AT +ALY     G  D  I+F   PL S LL +Y+  YA C  DTW+SELG+LS S PR+I    R VP GTNG VSALG  A+A GG FIG  ++ + + SG               +Q+ ++ LGA++GLLGS+LDS +GA LQA+++  ERH I            A   V G+D LTN+QVNA+S V  ++A GLLA
Sbjct:    8 LRVGVALALAALLGRRGLRKQSLDASGALAAFVVGFFSLASGYRFGVLLLGFYISGSRLTKVRAAAKQKLDANYKVGGQRSARQVLACSALATGVALYYVATFGDQDQPIEFAAAPLRSFLLASYIGHYACCTADTWASELGVLSASAPRMITT-LRVVPAGTNGAVSALGLAASALGGAFIGGLYWAMSLFSGT--------------AQVQVVLLGAVTGLLGSLLDSLLGATLQATWFDSERHTICEE---RHHTTAAATHVSGKDVLTNEQVNAVSVVATTLAAGLLA 281          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: W2HNN4_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2HNN4_PHYPR)

HSP 1 Score: 212 bits (540), Expect = 3.070e-63
Identity = 131/294 (44.56%), Postives = 177/294 (60.20%), Query Frame = 3
Query:   33 AACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYY--SDERHCIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLFP 908
            AA +A  L   G+KK+SL   GAAAA FVGFF+     R G  ++ FY S S LTK   + K+ L  +Y+ GGQRSA QVL+CSL AT +A+Y  ++ G  D  +DF+  P  S LL +++  YA C  DTW+SELG+LS+S PRLI    R VP GTNGGVS LG   +A GG FIG+ ++   + SG               +QL ++ LGA++GL GSVLDS +GA +QA+Y+  S  + C  +AP       G V  VCG D L+N+QVN +S +  +   G++A  LFP
Sbjct:   58 AALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRRVPPGTNGGVSMLGLAMSALGGAFIGVLYYAGSLPSGT--------------AQLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAP------QGDVEHVCGIDLLSNEQVNVVSVLATTAISGVVATYLFP 330          
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Match: K3WXG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXG0_GLOUD)

HSP 1 Score: 211 bits (537), Expect = 3.300e-63
Identity = 132/297 (44.44%), Postives = 174/297 (58.59%), Query Frame = 3
Query:   18 LKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHGFTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLALYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSRSPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCCLPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERHCIVSAPTAAELKDG-AVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLF 905
            L++  AA +A +L + G+KK+SL K GA AA FVGFFS     R G  ++ FY S S LTK     K  L  +Y+ GGQRSA QVL+CSL AT +A+Y     G  DA I F   P+ S LL +Y+  YA C  DTW+SELG+LS+S PRLI    R VP GTNG VS LG  A+A GG FIG+ +F+              +S  +  +Q  ++ LG   GL GSVLDS +GA LQ++++      I +  T    K   A   VCG D LTN+QVN +S VV ++A G +A+ +F
Sbjct:   15 LRMCVAAALACFLGHRGLKKQSLDKSGALAALFVGFFSLASGYRFGVLLLGFYFSGSKLTKVRANVKLQLDANYKVGGQRSAQQVLACSLLATGIAVYYMQHFGDRDAPIHFSKAPVQSFLLASYIGHYACCAADTWASELGVLSKSSPRLITT-LRKVPPGTNGAVSGLGLAASALGGAFIGVLYFI--------------SSLFTSTAQPQVILLGTTMGLFGSVLDSILGATLQSTWFDKTTKKICAEGTRKPKKSAEAQEHVCGIDVLTNEQVNVVSVVVATIASGYIAQAIF 296          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1993.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2C6_9PHAE1.990e-7855.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V002_9STRA1.080e-7751.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RII1_9STRA8.150e-7550.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8YV45_NANGC1.890e-6646.00Uncharacterized protein (Fragment) n=2 Tax=Nannoch... [more]
M4C455_HYAAE2.140e-6545.02Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A3M413_9STRA2.270e-6545.92Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A3F2RXA6_9STRA9.920e-6444.44Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6XQ07_9STRA1.230e-6345.89Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2HNN4_PHYPR3.070e-6344.56Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
K3WXG0_GLOUD3.300e-6344.44Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1993contigP-wetherbeei_contig1993:3333..4949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog272952.HpaP813873
PFAMsDUF92
Model size966
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.95e-66
EggNOG OGsCOG1836@1|root,KOG4491@2759|Eukaryota,3QE9A@4776|Peronosporales
Ec32 ortholog descriptionputative transmembrane protein
Ec32 orthologEc-02_003920.1
DescriptionIntegral membrane protein DUF92
Cds size909
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1993.3.3prot_P-wetherbeei_contig1993.3.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1993 3385..4944 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186185.5680566-UTR-P-wetherbeei_contig1993:3332..33841683186185.5680566-UTR-P-wetherbeei_contig1993:3332..3384Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1993 3333..3384 -
1683186185.6376088-UTR-P-wetherbeei_contig1993:4944..49491683186185.6376088-UTR-P-wetherbeei_contig1993:4944..4949Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1993 4945..4949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186185.579229-CDS-P-wetherbeei_contig1993:3384..35701683186185.579229-CDS-P-wetherbeei_contig1993:3384..3570Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1993 3385..3570 -
1683186185.588182-CDS-P-wetherbeei_contig1993:3669..38271683186185.588182-CDS-P-wetherbeei_contig1993:3669..3827Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1993 3670..3827 -
1683186185.6053421-CDS-P-wetherbeei_contig1993:4116..42321683186185.6053421-CDS-P-wetherbeei_contig1993:4116..4232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1993 4117..4232 -
1683186185.618285-CDS-P-wetherbeei_contig1993:4359..47061683186185.618285-CDS-P-wetherbeei_contig1993:4359..4706Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1993 4360..4706 -
1683186185.6281557-CDS-P-wetherbeei_contig1993:4842..49441683186185.6281557-CDS-P-wetherbeei_contig1993:4842..4944Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1993 4843..4944 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1993.3.3

>prot_P-wetherbeei_contig1993.3.3 ID=prot_P-wetherbeei_contig1993.3.3|Name=mRNA_P-wetherbeei_contig1993.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=303bp
MPAYLKLASAACIAAYLAYSGVKKKSLSKGGAAAAFFVGFFSFLVSARHG
FTMIAFYKSSSILTKAGHAQKKLLADDYQEGGQRSAWQVLSCSLFATLLA
LYGWLKLGMSDAFIDFRVDPLGSGLLCAYVAFYATCNGDTWSSELGILSR
SPPRLILPPFRSVPRGTNGGVSALGTVAAAAGGLFIGLAFFLLGVVSGCC
LPGDGTNSELSPPSQLPLLALGALSGLLGSVLDSAMGAILQASYYSDERH
CIVSAPTAAELKDGAVRRVCGRDWLTNQQVNAISAVVVSVAGGLLARRLF
PG*
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mRNA from alignment at P-wetherbeei_contig1993:3333..4949-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1993.3.3 ID=mRNA_P-wetherbeei_contig1993.3.3|Name=mRNA_P-wetherbeei_contig1993.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1617bp|location=Sequence derived from alignment at P-wetherbeei_contig1993:3333..4949- (Phaeothamnion wetherbeei SAG_119_79)
GGTCGATGCCAGCTTACCTAAAGCTCGCCTCTGCGGCATGCATAGCCGCA TACTTGGCGTACAGCGGTGTCAAGAAGAAATCACTGAGCAAGGGAGGCGC TGCAGCGGTGCGTGGAGACTTCCTCGTGTGCATGTTTCTTTCAACACAAA ACCCTTCCTGCGCTCCTGCGGCAAGGAAAACTTACACAGTCGCCGCAGTT CTTCTGCAATCCTCTCGCATCTCTTCTCCCTTTCTCCCTGCAGGCATTTT TCGTCGGGTTTTTCTCCTTCCTGGTCTCTGCTCGGCATGGCTTCACGATG ATTGCCTTCTACAAGTCTTCGTCCATCTTGACGAAGGCGGGTCACGCTCA GAAAAAACTGCTTGCCGACGACTACCAGGAAGGCGGCCAGCGCAGCGCCT GGCAAGTCCTATCGTGCTCGCTGTTTGCGACACTTCTGGCGCTTTACGGC TGGCTCAAGCTGGGGATGAGCGACGCGTTTATCGACTTTCGGGTCGACCC TCTTGGGAGCGGGCTGCTGTGCGCCTACGTCGCTTTTTACGCGACGTGCA ACGGTGACACGTGGAGCTCTGAACTTGGCATCTTGAGCAGGTAGAAGTAA AGGCAATGCGGTTTCTGACAGGGAATTCTTCTTTTATGATAAAATAATTA GCATTCGCCTTGCAGGATTCGTGGACTGTATTTACTTTTTTGCTTTCCCC CTGTCTACCGGCGCTAGGTCACCGCCGCGGCTCATCCTGCCTCCGTTCAG GAGCGTGCCACGGGGCACAAATGGAGGCGTTTCGGCGCTGGGCACCGTCG CTGCGGCGGCAGGCGGGCTGTTTATCGGATTAGGCAAGGCTGATGCTGGC GTGGGAGAATAGGGTGTTGGCAAATGCGGAGGCTTTGTTCTTCCTCGGCA GCAGGTAGCTTCTCAAACTGCTCTATGTTTGGGCAGTATTTGCGCCTTGG ACCCGGACGTGACGAGGGAGGACTTTTGTTACATGCTCCTGGAAAGAAAC GGAAGTGGAGTCCACATGCATTTTTGTGCTCCATTCATTTTCCCTTTCTC ATCGCTTCGCTGCATGTGTTCTCGGTTGACGCGTCGCCGGCATCGTTTGT TGCGGGCGCCGCTCTCCCACAGCATTCTTCTTGCTGGGGGTCGTGTCCGG CTGCTGTCTGCCGGGCGACGGAACCAATTCGGAGCTGTCGCCACCGTCCC AGCTGCCCCTGCTGGCGCTGGGGGCGCTCAGCGGGCTCCTCGGAAGCGTC CTCGACAGCGCGATGGGCGCGATCTTGCAAGTAAGGTTTTATCTCTCTTT CCTTTCCCTGGAGCTATTACTAGCTTGGAGCTCGCCGACCTCCTCCCCCG ACTCCGACTTGCTCTGTCCGTCTTGGCAGGCATCATACTACAGCGACGAG CGGCACTGTATTGTCTCGGCGCCGACGGCCGCTGAGCTGAAGGACGGCGC CGTCCGACGCGTCTGTGGGCGCGATTGGTTGACGAATCAGCAGGTTAACG CAATCTCTGCAGTGGTTGTGAGCGTCGCTGGAGGTCTTCTTGCGCGGCGG CTCTTTCCCGGCTGACGGCGGTTTTCTCGCGATCCCAAAAAGAGCAAAAT ATCAAACCATATAAACA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1993:3333..4949-

>mRNA_P-wetherbeei_contig1993.3.3 ID=mRNA_P-wetherbeei_contig1993.3.3|Name=mRNA_P-wetherbeei_contig1993.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=909bp|location=Sequence derived from alignment at P-wetherbeei_contig1993:3333..4949- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAGCTTACCTAAAGCTCGCCTCTGCGGCATGCATAGCCGCATACTT
GGCGTACAGCGGTGTCAAGAAGAAATCACTGAGCAAGGGAGGCGCTGCAG
CGGCATTTTTCGTCGGGTTTTTCTCCTTCCTGGTCTCTGCTCGGCATGGC
TTCACGATGATTGCCTTCTACAAGTCTTCGTCCATCTTGACGAAGGCGGG
TCACGCTCAGAAAAAACTGCTTGCCGACGACTACCAGGAAGGCGGCCAGC
GCAGCGCCTGGCAAGTCCTATCGTGCTCGCTGTTTGCGACACTTCTGGCG
CTTTACGGCTGGCTCAAGCTGGGGATGAGCGACGCGTTTATCGACTTTCG
GGTCGACCCTCTTGGGAGCGGGCTGCTGTGCGCCTACGTCGCTTTTTACG
CGACGTGCAACGGTGACACGTGGAGCTCTGAACTTGGCATCTTGAGCAGG
TCACCGCCGCGGCTCATCCTGCCTCCGTTCAGGAGCGTGCCACGGGGCAC
AAATGGAGGCGTTTCGGCGCTGGGCACCGTCGCTGCGGCGGCAGGCGGGC
TGTTTATCGGATTAGCATTCTTCTTGCTGGGGGTCGTGTCCGGCTGCTGT
CTGCCGGGCGACGGAACCAATTCGGAGCTGTCGCCACCGTCCCAGCTGCC
CCTGCTGGCGCTGGGGGCGCTCAGCGGGCTCCTCGGAAGCGTCCTCGACA
GCGCGATGGGCGCGATCTTGCAAGCATCATACTACAGCGACGAGCGGCAC
TGTATTGTCTCGGCGCCGACGGCCGCTGAGCTGAAGGACGGCGCCGTCCG
ACGCGTCTGTGGGCGCGATTGGTTGACGAATCAGCAGGTTAACGCAATCT
CTGCAGTGGTTGTGAGCGTCGCTGGAGGTCTTCTTGCGCGGCGGCTCTTT
CCCGGCTGA
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