mRNA_P-wetherbeei_contig1986.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1986.1.2
Unique NamemRNA_P-wetherbeei_contig1986.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A835ZFM7_9STRA (PolyA_pol domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM7_9STRA)

HSP 1 Score: 591 bits (1523), Expect = 3.870e-201
Identity = 332/582 (57.04%), Postives = 393/582 (67.53%), Query Frame = 3
Query:  459 LQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQ-TVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATA-GLSEDPTERGEERRLALYSAFLLPFADSYC----RDAK-GAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQG---VWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            ++LT  ER LF+LLL VVEEE +GTTLRVAGGWVRDKLLG     G+  VG  +K+D+DIALDNCLG+ FAE +N  L + G KS AVG+VSKNP+KSKHLETATM L GF IDFVNLRTESYT DSRIPNMGIGT E+DAYRRDLTIN+LFYNINT  VEDFTGRG +DLAAGV+STPLPA  TLLDDPLRVLRS+RFASRF F MS DLL AC  PEVH AL +KVS ERIG EVD MVRS +PL AF LIC+LGLA ++F +P T              + G AA   L      A                             A +F  SLVYLKNMHHLL D  +AA    LS D     +ERRLALY AFLLP A ++     RD +     P+ R++++D LK RARDA  VH LH  AL+FQLLLRR+  AP+T  N A  A DR+ AGL++R+ G LW +ALLLALTGDLGTQHILD AVR R DKE D AI  AY  M R +  MGL G   VW+ +P +DG  +  LLP LP+GP FK ++D+Q+ W+L +P G+  +   HV + +A+Y
Sbjct:    4 VKLTEGERALFRLLLGVVEEEAMGTTLRVAGGWVRDKLLGAARCGGEHMVGVDNKMDVDIALDNCLGKGFAETVNRHLAKKGMKSAAVGIVSKNPEKSKHLETATMHLLGFSIDFVNLRTESYTSDSRIPNMGIGTPEDDAYRRDLTINALFYNINTGLVEDFTGRGLTDLAAGVISTPLPAVDTLLDDPLRVLRSIRFASRFNFNMSQDLLMACKDPEVHVALAQKVSYERIGVEVDQMVRSHQPLRAFTLICDLGLAPIVFAVPPT-------------DLLGCAAGCGLDCCDPSA-----------------------PLQLDTASIFSQSLVYLKNMHHLLGDAVLAAAGIALSGDGETAVQERRLALYGAFLLPLAATHYWERGRDREVSKPHPVTRYIISDALKLRARDAEQVHRLHLSALEFQLLLRRTVGAPITDANCAAVAPDRVEAGLVLRRVGELWRMALLLALTGDLGTQHILDSAVRDRADKEADEAIICAYASMGRALEGMGLVGESPVWELKPAIDGVGIGKLLPGLPKGPVFKEILDDQIEWILRNPYGSEGEVKEHVLHKYAQY 549          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: D7G2S4_ECTSI (PolyA_pol domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S4_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 6.430e-163
Identity = 282/643 (43.86%), Postives = 376/643 (58.48%), Query Frame = 3
Query:  465 LTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQT-VGYSHKVDIDIALDNCLGREFAEKINNFLLR------IGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLL------------------------------------RDGAVAATA-------------GLSEDP----TERG-------------EERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            LT +E +LFK LL +VE+E++GTTLRVAGGWVRDKL+G+ +   Q  +   +K+DIDIALDNC+G +FA ++N +L R        ++   V +++ NP+KSKHLETAT+++  FW+DFVNLRTESY  DSRIP++ IGT  ED++RRDLTINSLFYN+NT  VED+TG+G SDL  G+V TPLP   TLLDDPLR LR+VRFASR  FR+  +L+ A   P+VHEAL  KVSRER+G E+D MVRS  PL AFEL+  + +  ++FP+P+  + P+                                                       +  +   +VYLKNM HLL                                    R   V ATA             G S+      T+RG             E RRL LY+AFLLP ADS C + K A +PL + +MAD LK RA+D   V  L   A+DFQLLLR++   PLT  NS      RL+ GL MR  GPLW VAL+L LTGDLGT+HILD  VR R DKEEDAA+  AY+ MAR +  MGL+GVWD +P  +G E++ +LP +PRGP F  V+D+Q++WM+ +P+GT+++ + +++  +  +
Sbjct:  127 LTKEEDKLFKTLLEMVEKEKMGTTLRVAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGARKRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSFRRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASRLGFRVHPELMEAGRDPKVHEALCMKVSRERVGCELDQMVRSASPLRAFELMEGMKILPMVFPLPEGFVLPM---------------------------------------------------DDDVSRAYEFGMVYLKNMFHLLDREQTVLDDFNAFGPGVGDEGVQEEEEEVSPAAARERLKGVKATAAKKVKGAEGKVKGGGSKKAVGAGTQRGKAGITVTEGMDKEEMRRLGLYAAFLLPLADSMCPNQKRANVPLIQVMMADYLKLRAKDPQRVLQLQSAAMDFQLLLRKTARGPLTRANSKPITFPRLAPGLTMRAVGPLWRVALVLGLTGDLGTKHILDSNVRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPRGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 718          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S2V443_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V443_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 3.610e-129
Identity = 255/592 (43.07%), Postives = 339/592 (57.26%), Query Frame = 3
Query:  432 TAPHVRPAALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLG--------RPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPL-LPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGA-----------VLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTA-GNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDE-QVRWMLCHPDGTRDD 2138
            T  +V P  +QL+ +E RLFKLL+R+VE+ R+GTTLRVAGGWVRDKLL         R +++G        VDIDIALDN LG++FA+ IN++L + GR S  V VVS+NP+KSKHLETATM+LGGF IDFVNLRTE Y+ DSRIP  M IGT  EDA RRDLTINSLFYNINT CVED+TG G  DL   VV+TPLPA TTL DDPLR LR++RFA+RF F M+DDLL AC  P+VH+AL  KVSRER+G+EV  M+ +Q PL+A  LI  LGL   +F       TP P  +  A + + G     +    A+                                + ++  LV+L +M+ LL  G       ++E       +R +ALY+AFL PF         G              P+   ++ D LK   R+   V ++  CA+ FQ + R  T    +  G      + R   GL++R++GPLW  +LLL L+ DL  +H     V   R  +    +   Y  +A+ + + GL+G WD +P  +GNE+ A+LP L   P   A V E Q++WML HP+GT ++
Sbjct:   58 TTSYVAPLHMQLSPEEERLFKLLIRIVEDYRMGTTLRVAGGWVRDKLLHEHMSSRNVRSKRSGDV-----NVDIDIALDNMLGQDFAKTINDWLKQHGRTSKHVAVVSRNPEKSKHLETATMKLGGFSIDFVNLRTECYSEDSRIPETMCIGTPYEDALRRDLTINSLFYNINTGCVEDWTGAGVKDLERQVVATPLPALTTLRDDPLRALRAIRFAARFGFTMADDLLNACRNPQVHQALLTKVSRERVGSEVQNMITAQSPLMALNLIVYLGLGPSVFT------TPAPEHVQVAGSDVGGEEGEVDFAGQAN-----------------------------HQHDRYQAGLVHLTHMNTLLEGGG-GCLRRVAEAVASDAHQRAVALYAAFLWPFHGLQYTPPPGTKKGKRAGKLSRARPVVDVILGDNLKRGRRELREVGLVQECAVLFQNMARVHTMYDTSMHGPLPPIKLTRRELGLVVRRSGPLWRESLLLGLSADLSKRHGGLGEVFNSRHVKRHLRMLAVYEALAQTIEDYGLEGAWDLKPMFNGNEVIAILPGLKDHPRVIAEVQEVQIKWMLDHPEGTTEE 608          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S3XWT3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWT3_HETAK)

HSP 1 Score: 380 bits (977), Expect = 2.680e-118
Identity = 245/613 (39.97%), Postives = 328/613 (53.51%), Query Frame = 3
Query:  423 GPPTAPHVRPAALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLL---------GRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLD-SRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRH----------LMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHM---------ARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            G    P V  A + L  DE +LF+LLLR  +E  LGTTLRVAGGWVRDKLL         G P  AG     + ++DID+ALDN +G  FA+++N++L   GR++ +V +V+KNP+KSKHLETATM++ GF +DFVNLRTE+YT + SRIP+M IG+  EDA RRDLTIN+LFYNINT  VED+T RG +DL   VV TPLPA TT LDDPLRVLR+VRFA R  F + ++LL A  + EVH+AL  KVSRERIG+EV+ M+  + PL +F +I  LGL  ++FP P  +  P P                                                        VF+ SL+++ +M  LL  GA    A L   PT+   E+R+ LY+AFL PF         G      R           LM +MLK  AR+   V  + R A  F  L+ +    P          V R   G  + +AG LW VA+L+ L  D           RG    E + +++    HM         AR +  +GL GVWD +P +DGN ++ +   +P+G AF  ++D Q  WML H +GTR+  V H+   F ++
Sbjct:  123 GEEEGPLVVDADIILRADEAKLFRLLLRASQERGLGTTLRVAGGWVRDKLLEAGGHWAVKGLP--AGSQSVDTSQIDIDVALDNMVGAAFADEVNDWLQHKGRQTKSVAIVAKNPEKSKHLETATMKISGFSLDFVNLRTETYTDEASRIPSMAIGSPAEDALRRDLTINALFYNINTGKVEDWTRRGLADLRGRVVRTPLPARTTFLDDPLRVLRAVRFAGRLGFTVDEELLGAASSKEVHQALLLKVSRERIGSEVEGMMAGRAPLHSFHIIVGLGLGPIVFPFPPMMTEPPP----------------------------------------------------PPMRVFQTSLLHMTHMTALLEGGAQRMRAHLP--PTDL--EKRMGLYAAFLWPFRHLRYSPLDGTGRKKGRQGARTEGVIYFLMQEMLKRPARERKAVETIQRAAEQFSALVAKREYGP----------VGRAELGRALVEAGELWQVAMLMGLAVD-------QSRARGDGTCESEMSLSYVKYHMGWMRKYEALAREIEALGLVGVWDMKPLVDGNAMKEIFRNIPKGKAFTELMDAQKEWMLEHQEGTREQLVTHLTQEFQDF 660          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A0K6S8F2_9ALVE (PolyA_pol domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8F2_9ALVE)

HSP 1 Score: 378 bits (971), Expect = 2.270e-116
Identity = 244/644 (37.89%), Postives = 339/644 (52.64%), Query Frame = 3
Query:  456 ALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAG----------LSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLL-------------RRSTCAPLTAGNSAR------FAVDRLSAGLIMRQAGPLWTVALLLALT-------GDLGTQHILDD-------------------------AVRGRRDKE-----EDAAIADAYLHM----ARCVREMGLQGVWDRRPPLDGNELQ-ALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            ++ LT +E RLF LL   + E  L TT+RVAGGWVRDK+LG+              DIDIALD+  G++FAEK+  ++   G ++H+VGV+  NPD+SKHLETAT  + G  IDF+NLRTESY   +RIP   IGT EEDA RRD T N+LFYNINTA VEDFTG G +DL  GVV TPL A TT LDDPLRVLR+VRFASR+ F +++D+   C   EVHEAL  KVSRERIG E++ +++  + + AF +I +L L  VIFP+P+               + G     E      IA                                  H   YL  +   LR  A +A  G          L     + G+ +R+  Y+AFL+PFA    +  K  + P  +H+M + LK   RDA  + +LH+ +  F+ LL                + +P  A + A        ++ R+ AG ++RQAG LW +A +LAL        G L   H+  +                         +V G + +E     E  ++A + L      A  +R +GL+GVWD +P LDG EL+ ++LP LP+GP FK V+DE++RWML HP+GT++   +H+R  F ++
Sbjct:  164 SIPLTEEEARLFDLLKSALRECGLKTTMRVAGGWVRDKILGKTSP-----------DIDIALDDMTGKDFAEKVTEWMKTKGMETHSVGVIRSNPDQSKHLETATTSIAGLKIDFLNLRTESYAEHTRIPTAEIGTPEEDAKRRDFTFNALFYNINTATVEDFTGHGLTDLRRGVVRTPLDARTTFLDDPLRVLRAVRFASRYRFELTEDVRDNCRCKEVHEALANKVSRERIGVEMEGIMKKSDLVFAFGMIRDLSLCDVIFPLPE------------GEGLEGEGGSVERSYDLGIA----------------------------------HVRSYLW-LERRLRSAAQSAALGEKQRQGADLLLRAFEEQEGDHKRIGAYAAFLIPFAGLEYKTKKQRLEPAVQHVMLEGLKLPKRDADRIVLLHKSSNAFRDLLPLPETLLTEGGAISEDSSSPARASDDAASSSGASLSLSRVQAGEVLRQAGELWKMACILALCRHVTPALGSLPPPHLTTEPEPLEIPPTNGNGNGVGGVEGGAVGSVGGVQREESTGGGEGTSVASSILRHFCVGAEEIRALGLEGVWDLKPLLDGGELKKSVLPNLPKGPEFKIVLDEEMRWMLGHPEGTKEQCASHLRETFEKF 749          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S3L3Q3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3Q3_9STRA)

HSP 1 Score: 375 bits (962), Expect = 1.130e-114
Identity = 253/659 (38.39%), Postives = 333/659 (50.53%), Query Frame = 3
Query:  453 AALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPE-QAGQTV-------------------------------GYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVA---------ATAGLSEDP-TERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPR-----------HLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVD---------------------------RLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRG----RRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            +++ L+ +E  LF LL RV ++  L TTLRVAGGWVRDKLL  PE QA  TV                                 S  VDIDIALD+ LGREFA+ +N +L+  G  + +VGVV KNP+KSKHLETATM++G FWIDFVNLR E YT DSRIP+ M IGTAEEDA RRDLTIN+LFYNINT  VED+TGRG  DL  GVV+TPLP  TTLLDDPLRVLRSVRFA+R  F M ++L++A     V  AL +KVSRER+G EVDLM+RS++P+ A  L+  L LA  +FP+         LLP A  S+                                               +F   +  L+  H  L D  V+            G +E   TE  E RRL  Y+AFL P  D   +  K   +P  +           +LM   LK   RDA +V  +   A +F  ++        T    +   V+                           RLS   IM + GPLW  A+ L++   L      D A+ G     R  EE     + Y   A  ++ + L G+W+ +P +DG  ++ +LP LP+GPAF+ V++EQ  WM+ HP G+ +    H++N F ++
Sbjct:  176 SSIALSEEELDLFALLRRVRKDTHLDTTLRVAGGWVRDKLLATPEFQAYHTVFDVGTKQRRLTSKFKTAASMGRQGTKVMSTNEASQPVDIDIALDDMLGREFADHLNEYLVANGEDTVSVGVVLKNPEKSKHLETATMKVGSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAMRRDLTINALFYNINTGEVEDWTGRGFDDLRRGVVATPLPPLTTLLDDPLRVLRSVRFAARLRFSMDEELVQAAKDARVRTALAQKVSRERVGGEVDLMLRSRDPVGAMRLLIHLELAETVFPLKS-------LLPKADLSV-----------------------------------------------LFAEGIELLQTAHDHLADCRVSPPIWCRFRKTAHGTTETRLTEDEESRRLLWYAAFLKPVLDYSRKSPKQEKVPKRQQTKKSNRSVLYNLMVSELKRPVRDAESVEKILNAASEFTEMISAGGDMSATMVLLSDVYVEENKCYMHGRRVDPILEEDPVWLHAMNFRLSTSKIMERVGPLWRAAMTLSIAEQLVELETTDYAIEGDVVDERQSEERLGAIERYDIFATTLQRLSLIGIWNEKPLMDGGAVKKILPNLPKGPAFRDVMEEQQSWMITHPGGSLEALSTHLQNMFPDF 780          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A4D9CTQ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTQ7_9STRA)

HSP 1 Score: 367 bits (943), Expect = 8.170e-113
Identity = 252/609 (41.38%), Postives = 324/609 (53.20%), Query Frame = 3
Query:  456 ALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPL---------PRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAV--DRLSAGLIMRQAGPLWTVALLLALT--------GDLGTQHI-LDDAVRGRRDKEEDA----------------AIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            ++ L+  E RLF+ +L VV++E LGTTLRVAGGWVRDK+LG     G+       VDIDIALDN +G +FA  +N +L + GR+ + VG++S NP KSKHLETATM++G F IDFVNLRTE+YT +SRIP+MGIG+ EEDA RRDLTIN+LFYN++T  +EDF GRG  D+  GV+ TPLPA TTLLDDPLRVLR+VRFASR  F +SD+L+ A   P VH AL  KVSRERIG+EVDLM+RS +P  A  LI ELGLA  +FP+P T I            + G       G                                    + F   L  LK M   LR        GLS        E RLALY+A LLP A+   R+  G  L L          R++ A MLK +A+DA  + +LH+    F   L                 V   R   G +M Q GPLW  ALLLA          G+   Q +  D  VR    + +D                 +   A L ++  ++  GL  ++ + PPLDG  L+ +LP +P GP F+ V+D QV   L  P+    +    +R AF EY
Sbjct:  156 SIPLSPAESRLFETMLAVVKDENLGTTLRVAGGWVRDKVLGHWSADGE-------VDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKVSRERIGSEVDLMMRSGQPARAMGLIAELGLAETVFPVPLTGI-----------EMEGXXXXXXXG------------------------------------KWFPLGLKALKEMELGLR----FRHWGLSP------AEVRLALYAALLLPLANLRYREKTGKKLNLNSNKKPLEVSRYVFARMLKMKAKDADKLILLHQVVDGFVPFLEEGKEGRREXXXXXXMEVRLKREQIGGLMLQVGPLWRAALLLAAVKCSVREEEGETRAQTMGRDSFVRTGASEGKDGIEGRDGQGXXXXXXKFSYRQAALQVSDYIQSAGLSEIYLQGPPLDGEGLRRVLPGIPHGPPFRLVMDAQVGIWLREPEVGGAEMGRRLREAFPEY 700          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A6I9RQN8_ELAGV (putative CCA tRNA nucleotidyltransferase 2 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RQN8_ELAGV)

HSP 1 Score: 351 bits (900), Expect = 5.050e-108
Identity = 224/590 (37.97%), Postives = 309/590 (52.37%), Query Frame = 3
Query:  459 LQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALD--FQL--LLRRSTCAPLTAGNSARFAVD-------RLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEYTDAACNA 2195
            + LT  E ++F+ LL VV   +L T LRVAGGWVRDKLLG+              DIDIALDN LGREF EK+N +L  IG +   +GV+  NPD+SKHLETA M++   WIDFVNLR+E+Y  +SRIP M  GTAEEDAYRRDLTINSLFYNINT  VEDFTGRG  DL  G + TPLP   T LDDPLRVLR++RF +RF F + +DL +A    EV  A+  K+SRERIG EVDLM+   +PL A + IC+L L  V+F  P+    P P +      + G                                               RH + Y+    +LL+    +    LS+      E+RRL LY A  LP  ++   D K   +P+  +++ + LK +  DA TV  LH  AL+  F +  LL     + +         +D       R+ AGL++RQ    W VALLL+       +H+  D +    + E    I   ++++ R + +  L  VW+ +P LDG  +  +L     GP  +   +  ++W L HP+GT ++ +  ++ + A+     C A
Sbjct:   63 IDLTEKEEKIFRRLLDVVRHFKLETQLRVAGGWVRDKLLGKD-----------CYDIDIALDNMLGREFCEKVNEYLHSIGEEQQGIGVIQCNPDQSKHLETARMRIYDIWIDFVNLRSETYVENSRIPTMKFGTAEEDAYRRDLTINSLFYNINTDSVEDFTGRGVQDLKTGYIVTPLPPKATFLDDPLRVLRAIRFGARFGFVLDEDLKKAASDEEVRAAIADKISRERIGHEVDLMISGNQPLRAMDYICDLQLFYVVFTFPEN---PQPSI------VEGCD---------------------------------------------RHCVSYMDAAWNLLQSTGYSI---LSD------EQRRLYLYGALFLPVRNTIYEDKKSKKIPVASYIIRNSLKLKNSDAETVMSLH-VALERFFSIISLLESDKDSKIVEAKLEDEFLDIPFDSRIRVLAGLLLRQIKTFWRVALLLSALLYPKVEHV-GDPLTNNFETERSREI---FVNIERVISKSDLDNVWEMKPLLDGKAIMGVLQLKSGGPLIREWQERLIKWQLAHPEGTTEECLDWMKQSQAKRVKLDCCA 573          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: R7QEI2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEI2_CHOCR)

HSP 1 Score: 345 bits (886), Expect = 1.880e-106
Identity = 246/603 (40.80%), Postives = 315/603 (52.24%), Query Frame = 3
Query:  408 PPAFRGPPTAPHVRPAALQLTTDERRLFKLLLRVVEEERL-GTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMP--DTLIT---PLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDA----KGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILD---DAVRGRRDK--EEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAE 2171
            P A   PP   H  P    LT  E RLF LLL VV E+ L   TLRVAGGWVRDKLL RP     T      VDIDIALD  LGR+FAE+IN +LL  G  + +VG++ KNPD+SKHLETATM++   W+D VNLRTE+Y+ DSRIP++ IGT  EDA RRDLTIN+LFYNINTA +ED T RG  D+ A +V TPLP  TTLLDDPLR LR+VRFASR  F +   L  AC    VH ALG KVSRERI AE+D  +  + P  A  L+ EL L  V+F +P  D L+    P P LPA A           LGA                                                  LL   A    AG +          R+A Y+A L   A   C  A    K    P+  +++   L+  ++DA  V  +H  AL  + L+ R + +           +DRL  G ++R +GP W  AL  AL  +L     L+   + V G R +  +E   +A AY    + + EMGL GVW+ +P ++GNEL  LLPRL +GP    +++EQ+ WM+ +P    D   A +   +AE
Sbjct:   16 PSAEPAPPIPTHHPP--FPLTPLEHRLFTLLLDVVREQALPNLTLRVAGGWVRDKLL-RPHADLGTA-----VDIDIALDTMLGRDFAERINAYLLDHGLHASSVGLIQKNPDQSKHLETATMRVMDVWLDLVNLRTETYSHDSRIPDVAIGTPLEDAMRRDLTINALFYNINTAALEDHTHRGFDDIRARLVRTPLPPLTTLLDDPLRALRAVRFASRLNFSVDSALFDACRDTNVHAALGAKVSRERISAEIDRCMGCENPSHAIGLLIELSLFPVVFRIPPEDELVDEPRPPPDLPALA-----------LGA--------------------------------------------------LLNLRAFPEPAGAAP--------LRIARYAALLSSLAACRCLFADCGRKRRPNPVVLYMLRGDLRLASKDAAEVVAIHATALQLRELVHRGSAS-----------LDRLEIGKVLRASGPTWRSALQNALIMELEPAKGLETYRNGVDGIRVELSDEMKVLAKAYDEFGKRIEEMGLDGVWEVKPAVNGNELMKLLPRLRKGPMIGTIMEEQIDWMIKNPKEGADGVRAWLVEKYAE 530          
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S2EN92_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN92_TRICV)

HSP 1 Score: 346 bits (888), Expect = 1.340e-105
Identity = 243/637 (38.15%), Postives = 317/637 (49.76%), Query Frame = 3
Query:  567 KLLGRPEQA------------GQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMH-HLL------------RDGAVAATAGLSEDPTERGEE-RRLALYSAFLLPFADSYCRD--------------AKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRS--------------------------------------TCAPLTAGNSARFAVD---------------RLSAGLIMRQAGPLWTVALLLALTGDLG--TQHILDDAVRG---RRDKEE-DAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQ-ALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
            KL+G P++             G  +  SH VDIDIALD+ LGREFA+++N++L+  GR++H+VGVV KNP+KSKHLETATM++G FWIDFVNLR E YT DSRIP+ M IGTAEEDAYRRDLTIN+LFYN+NT  VED+TGRG +DLA G V+TPLP  TTLLDDPLRVLRSVRFA+R  F M  +L  A     V  AL +KV+RER+GAEVDLM+RS++P+ A  L+  L LA  +FP+  T              ++G                                            ++F   L  L   H HLL            +  A+ A+ G  E      EE RR   Y+AFL PF D    +               K A       LM D LK  ARDA     + + A  F  L+R                                         C  L  G  A   VD               RL A  I+ + GPLW  AL+L+L+  L   T+  L+ A       +D EE    + + +   A  +  +GL G+W ++P LDG E++ ++L  +P+GPAF+ V++EQ RWML HP GTR     H+R  F +Y
Sbjct:   43 KLIGTPKKESADGSSYRITDDGSLLKESHPVDIDIALDDMLGREFADRLNDWLVNHGREAHSVGVVLKNPEKSKHLETATMKVGEFWIDFVNLRAEEYTEDSRIPDLMRIGTAEEDAYRRDLTINALFYNVNTGRVEDWTGRGFADLARGAVATPLPPLTTLLDDPLRVLRSVRFAARLRFAMDTELREAARDVRVRRALAQKVARERVGAEVDLMLRSKDPVGAMRLLVNLRLAGTVFPIEGT--------------VNGQV----------------------------------------RDDIFDRGLTLLSATHDHLLDCKLSPPAWCNKKRAAMLASHGACERMLMDDEEARRFLWYAAFLKPFRDCVQAERAEADEREGGARMRGKKANRSAITRLMVDELKRPARDAEASEKIMKAADQFTDLMRNGGDLTVAAIAMREMRVKYEYDVECDVDYFLDANGDCFSVKCTMLEEGGGATKTVDVSTETDPVWKRAMEFRLKAAKILDRVGPLWRAALILSLSARLAELTEDELNSATERDILEQDFEEMRLGVVERHDAFAASLLNLGLIGIWYQQPLLDGGEMKGSVLSGIPKGPAFREVMEEQGRWMLMHPGGTRKALADHMRKRFPDY 625          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFM7_9STRA3.870e-20157.04PolyA_pol domain-containing protein n=1 Tax=Tribon... [more]
D7G2S4_ECTSI6.430e-16343.86PolyA_pol domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2V443_9STRA3.610e-12943.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XWT3_HETAK2.680e-11839.97Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A0K6S8F2_9ALVE2.270e-11637.89PolyA_pol domain-containing protein n=2 Tax=Chrome... [more]
A0A7S3L3Q3_9STRA1.130e-11438.39Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A4D9CTQ7_9STRA8.170e-11341.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6I9RQN8_ELAGV5.050e-10837.97putative CCA tRNA nucleotidyltransferase 2 n=2 Tax... [more]
R7QEI2_CHOCR1.880e-10640.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2EN92_TRICV1.340e-10538.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1986contigP-wetherbeei_contig1986:516..4066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2S4
PFAMsPolyA_pol,PolyA_pol_RNAbd
Model size2354
Max annot lvl2759|Eukaryota
KEGG rclassRC00078
KEGG koko:K00974
KEGG ReactionR09382,R09383,R09384,R09386
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.2e-165
EggNOG OGsCOG0617@1|root,KOG2159@2759|Eukaryota
Ec32 ortholog descriptionPoly A polymerase, head domain
Ec32 orthologEc-11_003320.1
EC2.7.7.72
DescriptionCTP:tRNA cytidylyltransferase activity
Cds size1989
COG categoryJ
BRITEko00000,ko00001,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1986.1.2prot_P-wetherbeei_contig1986.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1986 815..4000 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186183.329356-UTR-P-wetherbeei_contig1986:515..8141683186183.329356-UTR-P-wetherbeei_contig1986:515..814Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1986 516..814 +
1683186183.4005215-UTR-P-wetherbeei_contig1986:4000..40661683186183.4005215-UTR-P-wetherbeei_contig1986:4000..4066Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1986 4001..4066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186183.3463352-CDS-P-wetherbeei_contig1986:814..11351683186183.3463352-CDS-P-wetherbeei_contig1986:814..1135Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1986 815..1135 +
1683186183.360779-CDS-P-wetherbeei_contig1986:1584..16461683186183.360779-CDS-P-wetherbeei_contig1986:1584..1646Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1986 1585..1646 +
1683186183.3711193-CDS-P-wetherbeei_contig1986:1878..20821683186183.3711193-CDS-P-wetherbeei_contig1986:1878..2082Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1986 1879..2082 +
1683186183.3811522-CDS-P-wetherbeei_contig1986:2306..25561683186183.3811522-CDS-P-wetherbeei_contig1986:2306..2556Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1986 2307..2556 +
1683186183.3928866-CDS-P-wetherbeei_contig1986:2848..40001683186183.3928866-CDS-P-wetherbeei_contig1986:2848..4000Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1986 2849..4000 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1986.1.2

>prot_P-wetherbeei_contig1986.1.2 ID=prot_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=663bp
MDRRLSGGPFSGSGSGSGIGGVPSRSGGGGGSGAGIPPAFRGPPTAPHVR
PAALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQ
TVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKS
KHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTI
NSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVR
FASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLL
AFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASI
AGAEIAAAAAVSSSGSAAAGSGARHADAAAAEVFRHSLVYLKNMHHLLRD
GAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRH
LMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDR
LSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIAD
AYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQV
RWMLCHPDGTRDDAVAHVRNAFAEYTDAACNASGGVAGGGGGGGDTSAAA
AVAREEGRTAAV*
back to top

mRNA from alignment at P-wetherbeei_contig1986:516..4066+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1986.1.2 ID=mRNA_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3551bp|location=Sequence derived from alignment at P-wetherbeei_contig1986:516..4066+ (Phaeothamnion wetherbeei SAG_119_79)
TCTTAGCGCCTTGGCAGCCTGCCAACCCACAGACCAGCCTCTTTGGAGCC AGCGTGATGTCCGTCGTGGGCAGACGCGTCGCGGCGAGGTGACTAAAGAT CGAATCTCCACTCTCCCTGCTCGGTTCTGACCGCTTTCAACGTTGATTTT TAAGTATCGCCAATCGTCCGCGTTTTCACGACCCATCTAGCCGCCTCTCG CTGCAACATTGCTTTCTTTGCTGCTATTCTGACAAACTCATCGTCACTGT TGTTGCTGCTGCCGGTCGCTGTGGCATCAGCAGCGGCCTCCCCGACTACA TGGATCGGCGGCTTTCCGGTGGCCCCTTTTCCGGCAGCGGCAGCGGCAGC GGTATCGGCGGCGTCCCGTCCAGGTCTGGCGGCGGCGGTGGCAGTGGCGC CGGGATCCCGCCGGCCTTCCGCGGGCCGCCAACGGCGCCCCACGTGCGTC CGGCGGCGCTGCAGTTGACGACGGACGAGCGACGGCTCTTCAAGCTGCTG CTGCGCGTGGTAGAGGAGGAGCGACTGGGCACGACGCTGCGGGTAGCGGG CGGTTGGGTGCGTGACAAGCTGCTCGGGCGGCCCGAGCAGGCGGGGCAGA CCGTCGGGTACAGCCACAAGGTGAGAGGGCAAGCAAGGAAGGAAGGGAAG GGGAGAAAAGTGCTGCTGCTGCTGCTGGTGGAGTTGCGTCTGGTGGGTGT TTTGTGAATACTTTGAAGTAGGAAGAGCTCGCGGAGGCCGAAGGTTTGGC TTGAGTAGAGACAGAGTGACGCGCTTCTCGAAAACCCTTTGCGCGCCACT TGCCTGTAACCCTTTTCGTGTCGTTTTGCATTTCTTACTGTGCTCTCTGT GATGGAGGTACGACTTTGCTAATTGTGGCTTACCCTGACATAAAGATGCT GCTTATCCTGCTTTCTTTGAGTCCACGCGGTTTGCCGGTAACGAGAGAGA GGGCGCACGCCTCCTCTTTGTCGTCTTCTGCGCGTGTCTTGTAGTGTGGT GTCATGAGTTGCCATGCTGATGTGCAGGTTGTGCTGCTGCCGTTTGCTGT CGCTTTTCTGCTGCGGCAGGTCGACATCGACATTGCGCTGGACAACTGCC TCGGCCGCGAGTTTGCTGAGAAGATCAACAAGTACGTACTTATTTCTCCC TGGGTTGTCCTCCATTTGTAGCGGTAGCGGGCGCAGAAAGATTTTCCGAG GCTTTGCAACGTCGGGTGACTGTCAGTCGATTTGCGTTTTTTTCCCTGCC CTCCACGGTTTCCGTCGTCCTTCTGTTTAGCCGGTGCCTCACTTTCTTTC CAGTCCGCCGCCCTCACATTCGACGCACTACACGCACGCAAACCGTTGAC TGACGCGTAACAGCTTTCTGCTGCGAATCGGGCGCAAGTCGCACGCGGTG GGCGTGGTGTCGAAAAACCCGGACAAGTCGAAGCATCTGGAGACGGCGAC TATGCAGCTGGGCGGCTTTTGGATCGACTTCGTCAACCTGCGCACCGAGT CGTATACGCTCGACAGCCGCATCCCCAACATGGGCATCGGCACGGCCGAG GAAGACGCGTACCGCCGGTCAGTGAGAGGTGATCGTTTTTGAAAGGAAAG AATTTTCTGAAATTGTTCTGTTGCTGTTTTGGCCTTTCCTGTGTGCATGC AGGTTTGCCGCCTGAATATCACGTTAGTGTAGCTGTTTTGGCCTCTTTCG GCTCATTCTATCTAATTGGGTTGTCGCGCTTTTGATCGCAATGCCGGCAA TTTTAATCCCCTATCCTGCCAACCTGGAATCCCCACGGCAGGGACCTGAC CATCAATTCGCTGTTCTACAACATCAACACGGCATGCGTGGAGGACTTCA CGGGCCGCGGCGCGTCCGACCTGGCGGCCGGTGTGGTTTCGACGCCGCTG CCGGCCTCCACGACGCTGCTGGATGACCCCCTACGGGTGCTGCGCTCGGT GCGCTTCGCCAGCCGCTTCTGCTTCCGCATGTCGGACGACCTCCTGCGGG CGTGCATGACGCCCGAGGTCCACGAGGCGCTCGGCAAAAAGGTGCGTCGT TTTGCTTTGTCTACTGTCTACTTTTCTCCTTTTCCATCAGTCGTTCCTTA GGAAATTTCTCTTCTTCCTACCGGGCGTTCAGTAAGTCTGCTGGGGCGGT CCAGTTGAGTCGTGTCTGTCCATGCGTCACCCTTTTCGCTGCTTTAGCTC TGCTCGCCTAGCAGCCCCTATTTCACAGCTCATCTTTAGGTTTCTTGAAA GGATGGCATTGAAGCACCCTGTCTGTAAGAGTTCCTCCTTATTCCTATAA CCATCGTTTTCCTGCACGCGCTTGCTCCCGCAGGTCAGCCGCGAGCGCAT CGGTGCCGAGGTGGACCTCATGGTGCGGTCACAGGAGCCGCTGCTCGCCT TTGAGCTTATCTGCGAGCTCGGCCTGGCCTCAGTCATCTTCCCCATGCCC GACACCCTCATCACCCCATTGCCGCTGCTACCGGCGGCCGCCGCCTCCAT CTCGGGAACCGCCGCCGTCGCCGAACTCGGAGCTGCTGCCTCGATCGCTG GGGCCGAAATTGCTGCTGCAGCTGCCGTTTCCTCTTCCGGATCCGCCGCG GCGGGCTCCGGGGCGCGCCACGCCGACGCCGCCGCTGCGGAGGTGTTTCG GCACTCGCTCGTCTACCTGAAAAACATGCACCACCTGCTGCGAGATGGGG CGGTGGCGGCGACGGCGGGGCTGTCGGAGGACCCCACGGAGCGCGGTGAG GAGCGGCGGCTTGCACTCTACTCGGCGTTCCTGCTGCCGTTTGCCGACTC GTACTGCCGGGATGCCAAGGGAGCGGTGCTGCCGCTACCGCGGCATCTGA TGGCCGACATGCTGAAGACGCGGGCGCGGGACGCCTGCACCGTGCACGTG CTGCACCGCTGCGCGCTGGACTTTCAGCTACTGCTGCGGCGGTCAACGTG CGCGCCGCTGACTGCCGGCAACAGTGCCCGATTTGCTGTCGACCGCCTCT CGGCCGGCCTTATCATGCGGCAGGCGGGCCCGCTCTGGACGGTGGCGCTG CTGCTGGCGCTGACGGGTGACCTGGGCACACAGCACATTCTAGACGACGC GGTGCGCGGCCGCCGGGACAAGGAAGAGGACGCGGCGATCGCCGATGCCT ACCTGCACATGGCGCGCTGTGTGCGGGAGATGGGCCTGCAAGGCGTCTGG GACCGGCGGCCGCCACTGGACGGCAATGAGCTGCAGGCGCTGCTGCCGCG GCTGCCGCGGGGGCCCGCCTTCAAGGCGGTCGTGGACGAACAGGTGCGTT GGATGCTCTGCCACCCAGACGGCACGCGGGACGACGCCGTGGCGCACGTC CGGAATGCATTTGCGGAGTACACCGACGCCGCCTGCAATGCCAGCGGCGG CGTCGCCGGCGGCGGCGGTGGAGGCGGCGATACTTCTGCAGCAGCGGCAG TAGCGCGCGAGGAGGGAAGGACGGCGGCGGTGTGAGACTGCCGCCGGCGC GGGGAAGACGGCGGCAGTTGTGGCCGTTGAAGGAGACGGCGGCGCTTTTT T
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1986:516..4066+

>mRNA_P-wetherbeei_contig1986.1.2 ID=mRNA_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1989bp|location=Sequence derived from alignment at P-wetherbeei_contig1986:516..4066+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCGGCGGCTTTCCGGTGGCCCCTTTTCCGGCAGCGGCAGCGGCAG
CGGTATCGGCGGCGTCCCGTCCAGGTCTGGCGGCGGCGGTGGCAGTGGCG
CCGGGATCCCGCCGGCCTTCCGCGGGCCGCCAACGGCGCCCCACGTGCGT
CCGGCGGCGCTGCAGTTGACGACGGACGAGCGACGGCTCTTCAAGCTGCT
GCTGCGCGTGGTAGAGGAGGAGCGACTGGGCACGACGCTGCGGGTAGCGG
GCGGTTGGGTGCGTGACAAGCTGCTCGGGCGGCCCGAGCAGGCGGGGCAG
ACCGTCGGGTACAGCCACAAGGTCGACATCGACATTGCGCTGGACAACTG
CCTCGGCCGCGAGTTTGCTGAGAAGATCAACAACTTTCTGCTGCGAATCG
GGCGCAAGTCGCACGCGGTGGGCGTGGTGTCGAAAAACCCGGACAAGTCG
AAGCATCTGGAGACGGCGACTATGCAGCTGGGCGGCTTTTGGATCGACTT
CGTCAACCTGCGCACCGAGTCGTATACGCTCGACAGCCGCATCCCCAACA
TGGGCATCGGCACGGCCGAGGAAGACGCGTACCGCCGGGACCTGACCATC
AATTCGCTGTTCTACAACATCAACACGGCATGCGTGGAGGACTTCACGGG
CCGCGGCGCGTCCGACCTGGCGGCCGGTGTGGTTTCGACGCCGCTGCCGG
CCTCCACGACGCTGCTGGATGACCCCCTACGGGTGCTGCGCTCGGTGCGC
TTCGCCAGCCGCTTCTGCTTCCGCATGTCGGACGACCTCCTGCGGGCGTG
CATGACGCCCGAGGTCCACGAGGCGCTCGGCAAAAAGGTCAGCCGCGAGC
GCATCGGTGCCGAGGTGGACCTCATGGTGCGGTCACAGGAGCCGCTGCTC
GCCTTTGAGCTTATCTGCGAGCTCGGCCTGGCCTCAGTCATCTTCCCCAT
GCCCGACACCCTCATCACCCCATTGCCGCTGCTACCGGCGGCCGCCGCCT
CCATCTCGGGAACCGCCGCCGTCGCCGAACTCGGAGCTGCTGCCTCGATC
GCTGGGGCCGAAATTGCTGCTGCAGCTGCCGTTTCCTCTTCCGGATCCGC
CGCGGCGGGCTCCGGGGCGCGCCACGCCGACGCCGCCGCTGCGGAGGTGT
TTCGGCACTCGCTCGTCTACCTGAAAAACATGCACCACCTGCTGCGAGAT
GGGGCGGTGGCGGCGACGGCGGGGCTGTCGGAGGACCCCACGGAGCGCGG
TGAGGAGCGGCGGCTTGCACTCTACTCGGCGTTCCTGCTGCCGTTTGCCG
ACTCGTACTGCCGGGATGCCAAGGGAGCGGTGCTGCCGCTACCGCGGCAT
CTGATGGCCGACATGCTGAAGACGCGGGCGCGGGACGCCTGCACCGTGCA
CGTGCTGCACCGCTGCGCGCTGGACTTTCAGCTACTGCTGCGGCGGTCAA
CGTGCGCGCCGCTGACTGCCGGCAACAGTGCCCGATTTGCTGTCGACCGC
CTCTCGGCCGGCCTTATCATGCGGCAGGCGGGCCCGCTCTGGACGGTGGC
GCTGCTGCTGGCGCTGACGGGTGACCTGGGCACACAGCACATTCTAGACG
ACGCGGTGCGCGGCCGCCGGGACAAGGAAGAGGACGCGGCGATCGCCGAT
GCCTACCTGCACATGGCGCGCTGTGTGCGGGAGATGGGCCTGCAAGGCGT
CTGGGACCGGCGGCCGCCACTGGACGGCAATGAGCTGCAGGCGCTGCTGC
CGCGGCTGCCGCGGGGGCCCGCCTTCAAGGCGGTCGTGGACGAACAGGTG
CGTTGGATGCTCTGCCACCCAGACGGCACGCGGGACGACGCCGTGGCGCA
CGTCCGGAATGCATTTGCGGAGTACACCGACGCCGCCTGCAATGCCAGCG
GCGGCGTCGCCGGCGGCGGCGGTGGAGGCGGCGATACTTCTGCAGCAGCG
GCAGTAGCGCGCGAGGAGGGAAGGACGGCGGCGGTGTGA
back to top