mRNA_P-wetherbeei_contig1986.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A835ZFM7_9STRA (PolyA_pol domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM7_9STRA) HSP 1 Score: 591 bits (1523), Expect = 3.870e-201 Identity = 332/582 (57.04%), Postives = 393/582 (67.53%), Query Frame = 3
Query: 459 LQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQ-TVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATA-GLSEDPTERGEERRLALYSAFLLPFADSYC----RDAK-GAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQG---VWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
++LT ER LF+LLL VVEEE +GTTLRVAGGWVRDKLLG G+ VG +K+D+DIALDNCLG+ FAE +N L + G KS AVG+VSKNP+KSKHLETATM L GF IDFVNLRTESYT DSRIPNMGIGT E+DAYRRDLTIN+LFYNINT VEDFTGRG +DLAAGV+STPLPA TLLDDPLRVLRS+RFASRF F MS DLL AC PEVH AL +KVS ERIG EVD MVRS +PL AF LIC+LGLA ++F +P T + G AA L A A +F SLVYLKNMHHLL D +AA LS D +ERRLALY AFLLP A ++ RD + P+ R++++D LK RARDA VH LH AL+FQLLLRR+ AP+T N A A DR+ AGL++R+ G LW +ALLLALTGDLGTQHILD AVR R DKE D AI AY M R + MGL G VW+ +P +DG + LLP LP+GP FK ++D+Q+ W+L +P G+ + HV + +A+Y
Sbjct: 4 VKLTEGERALFRLLLGVVEEEAMGTTLRVAGGWVRDKLLGAARCGGEHMVGVDNKMDVDIALDNCLGKGFAETVNRHLAKKGMKSAAVGIVSKNPEKSKHLETATMHLLGFSIDFVNLRTESYTSDSRIPNMGIGTPEDDAYRRDLTINALFYNINTGLVEDFTGRGLTDLAAGVISTPLPAVDTLLDDPLRVLRSIRFASRFNFNMSQDLLMACKDPEVHVALAQKVSYERIGVEVDQMVRSHQPLRAFTLICDLGLAPIVFAVPPT-------------DLLGCAAGCGLDCCDPSA-----------------------PLQLDTASIFSQSLVYLKNMHHLLGDAVLAAAGIALSGDGETAVQERRLALYGAFLLPLAATHYWERGRDREVSKPHPVTRYIISDALKLRARDAEQVHRLHLSALEFQLLLRRTVGAPITDANCAAVAPDRVEAGLVLRRVGELWRMALLLALTGDLGTQHILDSAVRDRADKEADEAIICAYASMGRALEGMGLVGESPVWELKPAIDGVGIGKLLPGLPKGPVFKEILDDQIEWILRNPYGSEGEVKEHVLHKYAQY 549
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: D7G2S4_ECTSI (PolyA_pol domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S4_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 6.430e-163 Identity = 282/643 (43.86%), Postives = 376/643 (58.48%), Query Frame = 3
Query: 465 LTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQT-VGYSHKVDIDIALDNCLGREFAEKINNFLLR------IGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLL------------------------------------RDGAVAATA-------------GLSEDP----TERG-------------EERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
LT +E +LFK LL +VE+E++GTTLRVAGGWVRDKL+G+ + Q + +K+DIDIALDNC+G +FA ++N +L R ++ V +++ NP+KSKHLETAT+++ FW+DFVNLRTESY DSRIP++ IGT ED++RRDLTINSLFYN+NT VED+TG+G SDL G+V TPLP TLLDDPLR LR+VRFASR FR+ +L+ A P+VHEAL KVSRER+G E+D MVRS PL AFEL+ + + ++FP+P+ + P+ + + +VYLKNM HLL R V ATA G S+ T+RG E RRL LY+AFLLP ADS C + K A +PL + +MAD LK RA+D V L A+DFQLLLR++ PLT NS RL+ GL MR GPLW VAL+L LTGDLGT+HILD VR R DKEEDAA+ AY+ MAR + MGL+GVWD +P +G E++ +LP +PRGP F V+D+Q++WM+ +P+GT+++ + +++ + +
Sbjct: 127 LTKEEDKLFKTLLEMVEKEKMGTTLRVAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGARKRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSFRRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASRLGFRVHPELMEAGRDPKVHEALCMKVSRERVGCELDQMVRSASPLRAFELMEGMKILPMVFPLPEGFVLPM---------------------------------------------------DDDVSRAYEFGMVYLKNMFHLLDREQTVLDDFNAFGPGVGDEGVQEEEEEVSPAAARERLKGVKATAAKKVKGAEGKVKGGGSKKAVGAGTQRGKAGITVTEGMDKEEMRRLGLYAAFLLPLADSMCPNQKRANVPLIQVMMADYLKLRAKDPQRVLQLQSAAMDFQLLLRKTARGPLTRANSKPITFPRLAPGLTMRAVGPLWRVALVLGLTGDLGTKHILDSNVRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPRGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 718
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S2V443_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V443_9STRA) HSP 1 Score: 407 bits (1047), Expect = 3.610e-129 Identity = 255/592 (43.07%), Postives = 339/592 (57.26%), Query Frame = 3
Query: 432 TAPHVRPAALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLG--------RPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPL-LPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGA-----------VLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTA-GNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDE-QVRWMLCHPDGTRDD 2138
T +V P +QL+ +E RLFKLL+R+VE+ R+GTTLRVAGGWVRDKLL R +++G VDIDIALDN LG++FA+ IN++L + GR S V VVS+NP+KSKHLETATM+LGGF IDFVNLRTE Y+ DSRIP M IGT EDA RRDLTINSLFYNINT CVED+TG G DL VV+TPLPA TTL DDPLR LR++RFA+RF F M+DDLL AC P+VH+AL KVSRER+G+EV M+ +Q PL+A LI LGL +F TP P + A + + G + A+ + ++ LV+L +M+ LL G ++E +R +ALY+AFL PF G P+ ++ D LK R+ V ++ CA+ FQ + R T + G + R GL++R++GPLW +LLL L+ DL +H V R + + Y +A+ + + GL+G WD +P +GNE+ A+LP L P A V E Q++WML HP+GT ++
Sbjct: 58 TTSYVAPLHMQLSPEEERLFKLLIRIVEDYRMGTTLRVAGGWVRDKLLHEHMSSRNVRSKRSGDV-----NVDIDIALDNMLGQDFAKTINDWLKQHGRTSKHVAVVSRNPEKSKHLETATMKLGGFSIDFVNLRTECYSEDSRIPETMCIGTPYEDALRRDLTINSLFYNINTGCVEDWTGAGVKDLERQVVATPLPALTTLRDDPLRALRAIRFAARFGFTMADDLLNACRNPQVHQALLTKVSRERVGSEVQNMITAQSPLMALNLIVYLGLGPSVFT------TPAPEHVQVAGSDVGGEEGEVDFAGQAN-----------------------------HQHDRYQAGLVHLTHMNTLLEGGG-GCLRRVAEAVASDAHQRAVALYAAFLWPFHGLQYTPPPGTKKGKRAGKLSRARPVVDVILGDNLKRGRRELREVGLVQECAVLFQNMARVHTMYDTSMHGPLPPIKLTRRELGLVVRRSGPLWRESLLLGLSADLSKRHGGLGEVFNSRHVKRHLRMLAVYEALAQTIEDYGLEGAWDLKPMFNGNEVIAILPGLKDHPRVIAEVQEVQIKWMLDHPEGTTEE 608
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S3XWT3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWT3_HETAK) HSP 1 Score: 380 bits (977), Expect = 2.680e-118 Identity = 245/613 (39.97%), Postives = 328/613 (53.51%), Query Frame = 3
Query: 423 GPPTAPHVRPAALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLL---------GRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLD-SRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRH----------LMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHM---------ARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
G P V A + L DE +LF+LLLR +E LGTTLRVAGGWVRDKLL G P AG + ++DID+ALDN +G FA+++N++L GR++ +V +V+KNP+KSKHLETATM++ GF +DFVNLRTE+YT + SRIP+M IG+ EDA RRDLTIN+LFYNINT VED+T RG +DL VV TPLPA TT LDDPLRVLR+VRFA R F + ++LL A + EVH+AL KVSRERIG+EV+ M+ + PL +F +I LGL ++FP P + P P VF+ SL+++ +M LL GA A L PT+ E+R+ LY+AFL PF G R LM +MLK AR+ V + R A F L+ + P V R G + +AG LW VA+L+ L D RG E + +++ HM AR + +GL GVWD +P +DGN ++ + +P+G AF ++D Q WML H +GTR+ V H+ F ++
Sbjct: 123 GEEEGPLVVDADIILRADEAKLFRLLLRASQERGLGTTLRVAGGWVRDKLLEAGGHWAVKGLP--AGSQSVDTSQIDIDVALDNMVGAAFADEVNDWLQHKGRQTKSVAIVAKNPEKSKHLETATMKISGFSLDFVNLRTETYTDEASRIPSMAIGSPAEDALRRDLTINALFYNINTGKVEDWTRRGLADLRGRVVRTPLPARTTFLDDPLRVLRAVRFAGRLGFTVDEELLGAASSKEVHQALLLKVSRERIGSEVEGMMAGRAPLHSFHIIVGLGLGPIVFPFPPMMTEPPP----------------------------------------------------PPMRVFQTSLLHMTHMTALLEGGAQRMRAHLP--PTDL--EKRMGLYAAFLWPFRHLRYSPLDGTGRKKGRQGARTEGVIYFLMQEMLKRPARERKAVETIQRAAEQFSALVAKREYGP----------VGRAELGRALVEAGELWQVAMLMGLAVD-------QSRARGDGTCESEMSLSYVKYHMGWMRKYEALAREIEALGLVGVWDMKPLVDGNAMKEIFRNIPKGKAFTELMDAQKEWMLEHQEGTREQLVTHLTQEFQDF 660
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A0K6S8F2_9ALVE (PolyA_pol domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8F2_9ALVE) HSP 1 Score: 378 bits (971), Expect = 2.270e-116 Identity = 244/644 (37.89%), Postives = 339/644 (52.64%), Query Frame = 3
Query: 456 ALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAG----------LSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLL-------------RRSTCAPLTAGNSAR------FAVDRLSAGLIMRQAGPLWTVALLLALT-------GDLGTQHILDD-------------------------AVRGRRDKE-----EDAAIADAYLHM----ARCVREMGLQGVWDRRPPLDGNELQ-ALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
++ LT +E RLF LL + E L TT+RVAGGWVRDK+LG+ DIDIALD+ G++FAEK+ ++ G ++H+VGV+ NPD+SKHLETAT + G IDF+NLRTESY +RIP IGT EEDA RRD T N+LFYNINTA VEDFTG G +DL GVV TPL A TT LDDPLRVLR+VRFASR+ F +++D+ C EVHEAL KVSRERIG E++ +++ + + AF +I +L L VIFP+P+ + G E IA H YL + LR A +A G L + G+ +R+ Y+AFL+PFA + K + P +H+M + LK RDA + +LH+ + F+ LL + +P A + A ++ R+ AG ++RQAG LW +A +LAL G L H+ + +V G + +E E ++A + L A +R +GL+GVWD +P LDG EL+ ++LP LP+GP FK V+DE++RWML HP+GT++ +H+R F ++
Sbjct: 164 SIPLTEEEARLFDLLKSALRECGLKTTMRVAGGWVRDKILGKTSP-----------DIDIALDDMTGKDFAEKVTEWMKTKGMETHSVGVIRSNPDQSKHLETATTSIAGLKIDFLNLRTESYAEHTRIPTAEIGTPEEDAKRRDFTFNALFYNINTATVEDFTGHGLTDLRRGVVRTPLDARTTFLDDPLRVLRAVRFASRYRFELTEDVRDNCRCKEVHEALANKVSRERIGVEMEGIMKKSDLVFAFGMIRDLSLCDVIFPLPE------------GEGLEGEGGSVERSYDLGIA----------------------------------HVRSYLW-LERRLRSAAQSAALGEKQRQGADLLLRAFEEQEGDHKRIGAYAAFLIPFAGLEYKTKKQRLEPAVQHVMLEGLKLPKRDADRIVLLHKSSNAFRDLLPLPETLLTEGGAISEDSSSPARASDDAASSSGASLSLSRVQAGEVLRQAGELWKMACILALCRHVTPALGSLPPPHLTTEPEPLEIPPTNGNGNGVGGVEGGAVGSVGGVQREESTGGGEGTSVASSILRHFCVGAEEIRALGLEGVWDLKPLLDGGELKKSVLPNLPKGPEFKIVLDEEMRWMLGHPEGTKEQCASHLRETFEKF 749
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S3L3Q3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3Q3_9STRA) HSP 1 Score: 375 bits (962), Expect = 1.130e-114 Identity = 253/659 (38.39%), Postives = 333/659 (50.53%), Query Frame = 3
Query: 453 AALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPE-QAGQTV-------------------------------GYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVA---------ATAGLSEDP-TERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPR-----------HLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVD---------------------------RLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRG----RRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
+++ L+ +E LF LL RV ++ L TTLRVAGGWVRDKLL PE QA TV S VDIDIALD+ LGREFA+ +N +L+ G + +VGVV KNP+KSKHLETATM++G FWIDFVNLR E YT DSRIP+ M IGTAEEDA RRDLTIN+LFYNINT VED+TGRG DL GVV+TPLP TTLLDDPLRVLRSVRFA+R F M ++L++A V AL +KVSRER+G EVDLM+RS++P+ A L+ L LA +FP+ LLP A S+ +F + L+ H L D V+ G +E TE E RRL Y+AFL P D + K +P + +LM LK RDA +V + A +F ++ T + V+ RLS IM + GPLW A+ L++ L D A+ G R EE + Y A ++ + L G+W+ +P +DG ++ +LP LP+GPAF+ V++EQ WM+ HP G+ + H++N F ++
Sbjct: 176 SSIALSEEELDLFALLRRVRKDTHLDTTLRVAGGWVRDKLLATPEFQAYHTVFDVGTKQRRLTSKFKTAASMGRQGTKVMSTNEASQPVDIDIALDDMLGREFADHLNEYLVANGEDTVSVGVVLKNPEKSKHLETATMKVGSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAMRRDLTINALFYNINTGEVEDWTGRGFDDLRRGVVATPLPPLTTLLDDPLRVLRSVRFAARLRFSMDEELVQAAKDARVRTALAQKVSRERVGGEVDLMLRSRDPVGAMRLLIHLELAETVFPLKS-------LLPKADLSV-----------------------------------------------LFAEGIELLQTAHDHLADCRVSPPIWCRFRKTAHGTTETRLTEDEESRRLLWYAAFLKPVLDYSRKSPKQEKVPKRQQTKKSNRSVLYNLMVSELKRPVRDAESVEKILNAASEFTEMISAGGDMSATMVLLSDVYVEENKCYMHGRRVDPILEEDPVWLHAMNFRLSTSKIMERVGPLWRAAMTLSIAEQLVELETTDYAIEGDVVDERQSEERLGAIERYDIFATTLQRLSLIGIWNEKPLMDGGAVKKILPNLPKGPAFRDVMEEQQSWMITHPGGSLEALSTHLQNMFPDF 780
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A4D9CTQ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTQ7_9STRA) HSP 1 Score: 367 bits (943), Expect = 8.170e-113 Identity = 252/609 (41.38%), Postives = 324/609 (53.20%), Query Frame = 3
Query: 456 ALQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPL---------PRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAV--DRLSAGLIMRQAGPLWTVALLLALT--------GDLGTQHI-LDDAVRGRRDKEEDA----------------AIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
++ L+ E RLF+ +L VV++E LGTTLRVAGGWVRDK+LG G+ VDIDIALDN +G +FA +N +L + GR+ + VG++S NP KSKHLETATM++G F IDFVNLRTE+YT +SRIP+MGIG+ EEDA RRDLTIN+LFYN++T +EDF GRG D+ GV+ TPLPA TTLLDDPLRVLR+VRFASR F +SD+L+ A P VH AL KVSRERIG+EVDLM+RS +P A LI ELGLA +FP+P T I + G G + F L LK M LR GLS E RLALY+A LLP A+ R+ G L L R++ A MLK +A+DA + +LH+ F L V R G +M Q GPLW ALLLA G+ Q + D VR + +D + A L ++ ++ GL ++ + PPLDG L+ +LP +P GP F+ V+D QV L P+ + +R AF EY
Sbjct: 156 SIPLSPAESRLFETMLAVVKDENLGTTLRVAGGWVRDKVLGHWSADGE-------VDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKVSRERIGSEVDLMMRSGQPARAMGLIAELGLAETVFPVPLTGI-----------EMEGXXXXXXXG------------------------------------KWFPLGLKALKEMELGLR----FRHWGLSP------AEVRLALYAALLLPLANLRYREKTGKKLNLNSNKKPLEVSRYVFARMLKMKAKDADKLILLHQVVDGFVPFLEEGKEGRREXXXXXXMEVRLKREQIGGLMLQVGPLWRAALLLAAVKCSVREEEGETRAQTMGRDSFVRTGASEGKDGIEGRDGQGXXXXXXKFSYRQAALQVSDYIQSAGLSEIYLQGPPLDGEGLRRVLPGIPHGPPFRLVMDAQVGIWLREPEVGGAEMGRRLREAFPEY 700
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A6I9RQN8_ELAGV (putative CCA tRNA nucleotidyltransferase 2 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RQN8_ELAGV) HSP 1 Score: 351 bits (900), Expect = 5.050e-108 Identity = 224/590 (37.97%), Postives = 309/590 (52.37%), Query Frame = 3
Query: 459 LQLTTDERRLFKLLLRVVEEERLGTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDAKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALD--FQL--LLRRSTCAPLTAGNSARFAVD-------RLSAGLIMRQAGPLWTVALLLALTGDLGTQHILDDAVRGRRDKEEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEYTDAACNA 2195
+ LT E ++F+ LL VV +L T LRVAGGWVRDKLLG+ DIDIALDN LGREF EK+N +L IG + +GV+ NPD+SKHLETA M++ WIDFVNLR+E+Y +SRIP M GTAEEDAYRRDLTINSLFYNINT VEDFTGRG DL G + TPLP T LDDPLRVLR++RF +RF F + +DL +A EV A+ K+SRERIG EVDLM+ +PL A + IC+L L V+F P+ P P + + G RH + Y+ +LL+ + LS+ E+RRL LY A LP ++ D K +P+ +++ + LK + DA TV LH AL+ F + LL + + +D R+ AGL++RQ W VALLL+ +H+ D + + E I ++++ R + + L VW+ +P LDG + +L GP + + ++W L HP+GT ++ + ++ + A+ C A
Sbjct: 63 IDLTEKEEKIFRRLLDVVRHFKLETQLRVAGGWVRDKLLGKD-----------CYDIDIALDNMLGREFCEKVNEYLHSIGEEQQGIGVIQCNPDQSKHLETARMRIYDIWIDFVNLRSETYVENSRIPTMKFGTAEEDAYRRDLTINSLFYNINTDSVEDFTGRGVQDLKTGYIVTPLPPKATFLDDPLRVLRAIRFGARFGFVLDEDLKKAASDEEVRAAIADKISRERIGHEVDLMISGNQPLRAMDYICDLQLFYVVFTFPEN---PQPSI------VEGCD---------------------------------------------RHCVSYMDAAWNLLQSTGYSI---LSD------EQRRLYLYGALFLPVRNTIYEDKKSKKIPVASYIIRNSLKLKNSDAETVMSLH-VALERFFSIISLLESDKDSKIVEAKLEDEFLDIPFDSRIRVLAGLLLRQIKTFWRVALLLSALLYPKVEHV-GDPLTNNFETERSREI---FVNIERVISKSDLDNVWEMKPLLDGKAIMGVLQLKSGGPLIREWQERLIKWQLAHPEGTTEECLDWMKQSQAKRVKLDCCA 573
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: R7QEI2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEI2_CHOCR) HSP 1 Score: 345 bits (886), Expect = 1.880e-106 Identity = 246/603 (40.80%), Postives = 315/603 (52.24%), Query Frame = 3
Query: 408 PPAFRGPPTAPHVRPAALQLTTDERRLFKLLLRVVEEERL-GTTLRVAGGWVRDKLLGRPEQAGQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPNMGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMP--DTLIT---PLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMHHLLRDGAVAATAGLSEDPTERGEERRLALYSAFLLPFADSYCRDA----KGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRSTCAPLTAGNSARFAVDRLSAGLIMRQAGPLWTVALLLALTGDLGTQHILD---DAVRGRRDK--EEDAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAE 2171
P A PP H P LT E RLF LLL VV E+ L TLRVAGGWVRDKLL RP T VDIDIALD LGR+FAE+IN +LL G + +VG++ KNPD+SKHLETATM++ W+D VNLRTE+Y+ DSRIP++ IGT EDA RRDLTIN+LFYNINTA +ED T RG D+ A +V TPLP TTLLDDPLR LR+VRFASR F + L AC VH ALG KVSRERI AE+D + + P A L+ EL L V+F +P D L+ P P LPA A LGA LL A AG + R+A Y+A L A C A K P+ +++ L+ ++DA V +H AL + L+ R + + +DRL G ++R +GP W AL AL +L L+ + V G R + +E +A AY + + EMGL GVW+ +P ++GNEL LLPRL +GP +++EQ+ WM+ +P D A + +AE
Sbjct: 16 PSAEPAPPIPTHHPP--FPLTPLEHRLFTLLLDVVREQALPNLTLRVAGGWVRDKLL-RPHADLGTA-----VDIDIALDTMLGRDFAERINAYLLDHGLHASSVGLIQKNPDQSKHLETATMRVMDVWLDLVNLRTETYSHDSRIPDVAIGTPLEDAMRRDLTINALFYNINTAALEDHTHRGFDDIRARLVRTPLPPLTTLLDDPLRALRAVRFASRLNFSVDSALFDACRDTNVHAALGAKVSRERISAEIDRCMGCENPSHAIGLLIELSLFPVVFRIPPEDELVDEPRPPPDLPALA-----------LGA--------------------------------------------------LLNLRAFPEPAGAAP--------LRIARYAALLSSLAACRCLFADCGRKRRPNPVVLYMLRGDLRLASKDAAEVVAIHATALQLRELVHRGSAS-----------LDRLEIGKVLRASGPTWRSALQNALIMELEPAKGLETYRNGVDGIRVELSDEMKVLAKAYDEFGKRIEEMGLDGVWEVKPAVNGNELMKLLPRLRKGPMIGTIMEEQIDWMIKNPKEGADGVRAWLVEKYAE 530
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Match: A0A7S2EN92_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN92_TRICV) HSP 1 Score: 346 bits (888), Expect = 1.340e-105 Identity = 243/637 (38.15%), Postives = 317/637 (49.76%), Query Frame = 3
Query: 567 KLLGRPEQA------------GQTVGYSHKVDIDIALDNCLGREFAEKINNFLLRIGRKSHAVGVVSKNPDKSKHLETATMQLGGFWIDFVNLRTESYTLDSRIPN-MGIGTAEEDAYRRDLTINSLFYNINTACVEDFTGRGASDLAAGVVSTPLPASTTLLDDPLRVLRSVRFASRFCFRMSDDLLRACMTPEVHEALGKKVSRERIGAEVDLMVRSQEPLLAFELICELGLASVIFPMPDTLITPLPLLPAAAASISGTAAVAELGAAASIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVFRHSLVYLKNMH-HLL------------RDGAVAATAGLSEDPTERGEE-RRLALYSAFLLPFADSYCRD--------------AKGAVLPLPRHLMADMLKTRARDACTVHVLHRCALDFQLLLRRS--------------------------------------TCAPLTAGNSARFAVD---------------RLSAGLIMRQAGPLWTVALLLALTGDLG--TQHILDDAVRG---RRDKEE-DAAIADAYLHMARCVREMGLQGVWDRRPPLDGNELQ-ALLPRLPRGPAFKAVVDEQVRWMLCHPDGTRDDAVAHVRNAFAEY 2174
KL+G P++ G + SH VDIDIALD+ LGREFA+++N++L+ GR++H+VGVV KNP+KSKHLETATM++G FWIDFVNLR E YT DSRIP+ M IGTAEEDAYRRDLTIN+LFYN+NT VED+TGRG +DLA G V+TPLP TTLLDDPLRVLRSVRFA+R F M +L A V AL +KV+RER+GAEVDLM+RS++P+ A L+ L LA +FP+ T ++G ++F L L H HLL + A+ A+ G E EE RR Y+AFL PF D + K A LM D LK ARDA + + A F L+R C L G A VD RL A I+ + GPLW AL+L+L+ L T+ L+ A +D EE + + + A + +GL G+W ++P LDG E++ ++L +P+GPAF+ V++EQ RWML HP GTR H+R F +Y
Sbjct: 43 KLIGTPKKESADGSSYRITDDGSLLKESHPVDIDIALDDMLGREFADRLNDWLVNHGREAHSVGVVLKNPEKSKHLETATMKVGEFWIDFVNLRAEEYTEDSRIPDLMRIGTAEEDAYRRDLTINALFYNVNTGRVEDWTGRGFADLARGAVATPLPPLTTLLDDPLRVLRSVRFAARLRFAMDTELREAARDVRVRRALAQKVARERVGAEVDLMLRSKDPVGAMRLLVNLRLAGTVFPIEGT--------------VNGQV----------------------------------------RDDIFDRGLTLLSATHDHLLDCKLSPPAWCNKKRAAMLASHGACERMLMDDEEARRFLWYAAFLKPFRDCVQAERAEADEREGGARMRGKKANRSAITRLMVDELKRPARDAEASEKIMKAADQFTDLMRNGGDLTVAAIAMREMRVKYEYDVECDVDYFLDANGDCFSVKCTMLEEGGGATKTVDVSTETDPVWKRAMEFRLKAAKILDRVGPLWRAALILSLSARLAELTEDELNSATERDILEQDFEEMRLGVVERHDAFAASLLNLGLIGIWYQQPLLDGGEMKGSVLSGIPKGPAFREVMEEQGRWMLMHPGGTRKALADHMRKRFPDY 625 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1986.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1986.1.2 >prot_P-wetherbeei_contig1986.1.2 ID=prot_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=663bp MDRRLSGGPFSGSGSGSGIGGVPSRSGGGGGSGAGIPPAFRGPPTAPHVRback to top mRNA from alignment at P-wetherbeei_contig1986:516..4066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1986.1.2 ID=mRNA_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3551bp|location=Sequence derived from alignment at P-wetherbeei_contig1986:516..4066+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1986:516..4066+ >mRNA_P-wetherbeei_contig1986.1.2 ID=mRNA_P-wetherbeei_contig1986.1.2|Name=mRNA_P-wetherbeei_contig1986.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1989bp|location=Sequence derived from alignment at P-wetherbeei_contig1986:516..4066+ (Phaeothamnion wetherbeei SAG_119_79)back to top |