mRNA_P-wetherbeei_contig1983.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1983.1.2
Unique NamemRNA_P-wetherbeei_contig1983.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A2V3IJB5_9FLOR (Lysophospholipid acyltransferase LPEAT1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB5_9FLOR)

HSP 1 Score: 233 bits (594), Expect = 2.150e-66
Identity = 158/454 (34.80%), Postives = 228/454 (50.22%), Query Frame = 3
Query:  240 STFEKVDETFKPYVRLASREPATRPYELMRTAVCAVVLLPVRAVLMIVLGLLMTLVAKIAMIGIP------------------TDSVEGVFMPLSTPRAVALMVLRPMARVVLWC-LGIWVICRKKVNWEDLAEVAPKEQQPPVKSRYTKPFVVAANHLGYIDIAVLFVAYGGAFVAKDAIANVPLVGTIARAIQTLFVRPKAHVADEIRERVLRSYEIHDHLFGTGSGSSXXXXXXXXXXXXXXXXXXXXXXXXXGGVDGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGSTVHGREGC--CGACLSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKT-AEEALQTARELTLQD 1535
            +T ++V + F P+ R++    +   YE+++T +  V + P+R + + + GL+M  VA IA IG+                    D  + +F P S  R   +++L P+AR +L+   G++ I   K     +A      ++ PV+  Y    V+ ANHLGYIDI VL   Y  +FV+K  + + PLVG+IARA+Q +FVR    +  ++  R+  +YE H                                                                                  R+ C  C AC+S LVIFPEGTT NG AMV FRTGVF AG+PV+PV +  PWR FN SWETI F++H+FRTMTQ VN V   ELP++ PS  E ++ RLYA NVQ + +  VL+QP+ PLNR+HKF+YH ++LGK+T  +E L+ A +L  QD
Sbjct:   21 NTEKQVHQFFLPFNRISGSWDS---YEIIKTVIMGVFVFPIRLLYLALAGLIMLTVASIATIGVTPSHAQDNPIRESKDSEILVDGKDPLFTPPSPWRRFLILLLFPIARSILFVSFGVYHIKSDKAEPSCMAS----REKMPVRDAY----VIIANHLGYIDILVLLCRYRSSFVSKGELEHAPLVGSIARALQCMFVRKGQSLTTQLINRIQATYECHRK--------------------------------------------------------------------------------RQNCPGCAACMSKLVIFPEGTTANGKAMVPFRTGVFNAGLPVVPVCIRFPWRRFNLSWETIRFREHMFRTMTQFVNYVHCTELPVFVPSAEEVSNARLYALNVQNAMN-EVLNQPIVPLNRKHKFLYHSYLLGKETNVQEVLKKAYDLQEQD 382          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A1X6PJB3_PORUM (PlsC domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJB3_PORUM)

HSP 1 Score: 231 bits (590), Expect = 4.050e-66
Identity = 158/447 (35.35%), Postives = 216/447 (48.32%), Query Frame = 3
Query:  249 EKVDETFKPYVRLASREPATRPYELMRTAVCAVVLLPVRAVLMIVLGLLMTLVAKIAMIGIPTDSVEGVFMPLSTPRAVALMVLRPMARVVLWC-LGIWVICRKKVNWEDLAEVAPKEQQPPVKSRYTKPFVVAANHLGYIDIAVLFVAYGGAFVAKDAIANVPLVGTIARAIQTLFVRPKAHVADEIRERVLRSYEIHDHLFGTGSGSSXXXXXXXXXXXXXXXXXXXXXXXXXGGVDGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGSTVHGREGC--CGACLSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKTAEEALQTARELTLQDPAIAAEAVEASAGAA 1580
            + V   F+P+ R++   PA  PYE+++TA+    + P+R +  +VLG  + L A +AM G+     +  + PL   R   L  + P+ R V +C  G++     ++ W    +             + K  V+ ANHLGY+DI  L   Y G+FVAK  IA VPL+G++ARAIQ LFV     +   + +RV  +Y  H                                                                              T      C  CG CL+TL IFPEGTT NGTAM++FRTGVF AG PV PV V LP++ +N SWE++ F+ H++RTMTQ+ N V LVELP+Y P  AE ADPRL+A+ VQ      +   PVY L+R+HKFVYHDF+ GK  A  AL  A EL   D  + A A E +  AA
Sbjct:   11 DDVHAHFQPFRRIS---PAWTPYEVVKTALLTFFVFPLRLLSFVVLGTGIYLTAALAMAGVSAAE-DYAYRPLPRWRKTLLAGISPLVRAVAFCAFGVY-----RIRWTRADDT------------HEKALVIVANHLGYLDIVALRAVYAGSFVAKGDIAKVPLLGSVARAIQCLFVVDGKPLTTSLLQRVDATYACH------------------------------------------------------------------LSKRARLSTEAPTGEAPADCPGCGTCLNTLTIFPEGTTCNGTAMIKFRTGVFLAGKPVRPVVVKLPYKRWNTSWESVPFRYHMWRTMTQVSNSVELVELPMYVPDEAESADPRLFAERVQTDMQAVLDGVPVYELSRKHKFVYHDFLRGKVDAPAALAKAEELRRGDKLLLAAATEGAEAAA 370          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A836CEJ6_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ6_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.180e-47
Identity = 209/560 (37.32%), Postives = 264/560 (47.14%), Query Frame = 3
Query:  213 DSLLPLLVPST-FEKVDETFKPYVRLA-SREPATRPYELMRTAVCAVVLLPVRAVLMIVLGLLMTLVAKIAMIGIPTDSVEGV--------FMPLSTPRAVALMVLRPMARVVLWCLGIWVICRKKVNWEDLAEVAPKEQQPPVKSRYT---KPFVVAANHLGYIDIAVLFVAYGG-AFVAKDAIANVPLVGTIARAIQTLFVRPKAHVADEIRERV-------LRSYEIHDHLFGTGSGSSXXXXXXXXXXXXXXXXXXXXXXXXXGGVDGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGSTVHGREGCCGACLSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADP-----------------------------------------------------------------------------------------------RLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKTAEEALQTARELTLQDPAI 1544
            ++  PLL P T F  +D TF+PY+RL  S +   R Y+ +R+AVC +VLLP+R   ++V  LL  LVAK++M+G+  D +  V          P    R + L  + P+AR +LW L +W I        D+A    +  Q  ++ + T    P V+ +NH GY+DI  +   +G  AFVAK AI+ VP +G +A A+Q +FV      AD I +R        LR  +         SG+S            XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A        +         LVIFPEGTTTNG AM+RFRTGVFRA +PV P+ +  P+RHFNPSWETI F  HL R MTQL     +  LP   PS      P                                                                                               R YAD VQ + +  VL Q VYPLNR+HK VYH + LG+ TA EAL  A  +T QDP +
Sbjct:    7 EASAPLLKPPTSFTDIDSTFRPYLRLTGSADRGRRAYDAVRSAVCGIVLLPLRLATLMVCLLLSYLVAKLSMLGLEGDDLAAVNASDTHSPLKPRPYWRILLLQPIGPLARGLLWSLAVWRI--------DVAAHDGESVQSGIREQGTAALSPMVIVSNHTGYLDILAIIAVHGPCAFVAKHAISAVPCIGAVAAAMQAVFVGSGCPAADAIAQRARAAHAWQLRQLQQAGSSASCPSGNSGDDSGRGSVCGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAQRKLRVLLQRLREPTYLPLVIFPEGTTTNGAAMIRFRTGVFRAQVPVQPLVIAFPFRHFNPSWETIHFHHHLLRIMTQLTCACSVTVLPPCRPSEPPLPKPVCTDQSGAEGGLGGGVAGQSDVARIAGEQQQQQRGKDASLNNSARPPLDNVASDAGVSARGHCSAAVGGDGKPYAARFGVDAARLGLGLGLLGGAREYADEVQRAMAA-VLRQGVYPLNRKHKQVYHAYCLGRITAAEALAMAETVTAQDPGL 557          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A7S3ACB5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ACB5_9RHOD)

HSP 1 Score: 166 bits (419), Expect = 4.920e-44
Identity = 86/153 (56.21%), Postives = 105/153 (68.63%), Query Frame = 3
Query: 1083 HGREGC--CGACLSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKTAEEALQTARELTLQD 1535
            H ++GC  C  C   +VIFPEGTTTNG  MV  RTGVF  G+PV PVA+  P RHFN SWETI  K+H++RTMTQ  N   LVE P Y P+  +  +PR +A +VQ S +  VL  PVYPL R+HKF YH +VLG KT EEAL+ A+ELT +D
Sbjct:   15 HLKKGCGGCPTCFRNIVIFPEGTTTNGYGMVPMRTGVFVPGLPVKPVAIRFPHRHFNLSWETIYLKEHIWRTMTQFRNYAELVECPTYVPTEEDIQNPREFARHVQESLN-EVLDLPVYPLGRKHKFAYHKYVLGLKTGEEALEEAKELTEKD 166          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A5J4Z565_PORPP (Lysophospholipid acyltransferase LPEAT1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z565_PORPP)

HSP 1 Score: 156 bits (395), Expect = 2.550e-38
Identity = 76/148 (51.35%), Postives = 102/148 (68.92%), Query Frame = 3
Query: 1101 CGACLSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKTAEEALQTARELTLQDPAI 1544
            C  C + L+IFPEGTT NG AM+RFR G F AG+ VLPV V  P++HFN SWE+I FK H++R MTQ VN V + EL +Y P+  E+ D  LYA NV+   S H+  + +Y LNR+HK +YH ++LG+KTA E L+ A +  L DP++
Sbjct:  238 CSDCATNLIIFPEGTTCNGHAMIRFRRGAFAAGLAVLPVVVSFPYKHFNSSWESILFKTHMWRIMTQFVNYVDISELGVYEPAEQEKVDAHLYARNVEKLYSQHLALE-IYDLNRKHKLMYHSYLLGQKTAGEVLELASQEKLADPSL 384          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A0L0FYG1_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYG1_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 8.030e-27
Identity = 65/131 (49.62%), Postives = 79/131 (60.31%), Query Frame = 3
Query: 1113 LSTLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDFVLGKKTAEEAL 1505
            L  LVIFPEGTTTNG  MV FRTGVFR   PV PV +  P +H++ SWET+    H++R MTQ VN V ++ L  Y PS  E AD  LYADNVQ   +  +         R HK  YHD +LG  T ++AL
Sbjct:  120 LPPLVIFPEGTTTNGVEMVSFRTGVFRCKAPVTPVCLRYPNKHYSLSWETVPITTHVWRLMTQFVNFVEVIPLDEYKPSQEELADAYLYADNVQKMMAEVMECGYSTTTTREHKVAYHDSILGNLTYDQAL 250          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A7S3USD2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD2_HETAK)

HSP 1 Score: 101 bits (251), Expect = 1.010e-21
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 3
Query: 1119 TLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQ 1424
            TL +FPEGTT+NG+ +++FRTGVF AG+PV PVAV LP+  F+PS+E+I    HL R ++Q VNR+++  LPL+ PS AER D   YA  V+     H LH+
Sbjct:   18 TLAVFPEGTTSNGSCLLKFRTGVFVAGVPVCPVAVHLPFGPFSPSYESIYTAAHLVRLLSQPVNRMQVRYLPLHRPSAAERGDAARYARAVR-----HALHR 114          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A0D9Y7E3_9ORYZ (PlsC domain-containing protein n=1 Tax=Oryza glumipatula TaxID=40148 RepID=A0A0D9Y7E3_9ORYZ)

HSP 1 Score: 103 bits (256), Expect = 1.420e-20
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 3
Query: 1116 STLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQASPSLHVLHQPV 1430
            S +++FPEGTTTNG  ++ FRTG F A +PV PV +  P+  F+P+W+++    H+F  + Q VN + +V LP+YCPS  E+ DP+LYA+NV+   +  VL  P+
Sbjct:  188 SMMLLFPEGTTTNGDYLLPFRTGAFLARVPVQPVILRYPYMMFSPAWDSMDGARHVFLLLCQFVNYIEVVRLPVYCPSEQEKEDPKLYANNVRKLIATEVLFIPL 292          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: A0A388KUC0_CHABU (PlsC domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KUC0_CHABU)

HSP 1 Score: 105 bits (261), Expect = 2.360e-20
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 1122 LVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQ 1394
            +++FPEGTTTNG  ++ F+TG F A  PVLPV +  P R  +P+WETI+   H+F  M QLVNR+ +   P Y PS  ER DPRLYADNV+
Sbjct:  303 MLLFPEGTTTNGEYLLPFKTGAFLAQSPVLPVLLRYPHRRLSPTWETITATRHIFLLMCQLVNRLEVTIFPTYIPSEKERLDPRLYADNVR 393          
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Match: UPI0009009D42 (lysophospholipid acyltransferase LPEAT1-like isoform X1 n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI0009009D42)

HSP 1 Score: 100 bits (250), Expect = 3.040e-20
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 3
Query: 1119 TLVIFPEGTTTNGTAMVRFRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRLVELPLYCPSPAERADPRLYADNVQ 1394
            T+++FPEGTTTNG  ++ F+TG F AG PVLPV +  P+  F+ +W+TIS   H+   + Q VN + ++ LP+Y PS  E+ DP+LYA NV+
Sbjct:  111 TIMLFPEGTTTNGDYLLTFKTGAFLAGTPVLPVILKYPYERFSVAWDTISGARHILFLLCQFVNHLEVIRLPVYYPSQEEKDDPKLYASNVR 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1983.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJB5_9FLOR2.150e-6634.80Lysophospholipid acyltransferase LPEAT1 n=1 Tax=Gr... [more]
A0A1X6PJB3_PORUM4.050e-6635.35PlsC domain-containing protein n=1 Tax=Porphyra um... [more]
A0A836CEJ6_9STRA2.180e-4737.32PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3ACB5_9RHOD4.920e-4456.21Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z565_PORPP2.550e-3851.35Lysophospholipid acyltransferase LPEAT1 n=1 Tax=Po... [more]
A0A0L0FYG1_9EUKA8.030e-2749.62Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S3USD2_HETAK1.010e-2151.96Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0D9Y7E3_9ORYZ1.420e-2044.76PlsC domain-containing protein n=1 Tax=Oryza glumi... [more]
A0A388KUC0_CHABU2.360e-2053.85PlsC domain-containing protein n=1 Tax=Chara braun... [more]
UPI0009009D423.040e-2047.83lysophospholipid acyltransferase LPEAT1-like isofo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1983contigP-wetherbeei_contig1983:579..4359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog72019.SARC_05818T0
PFAMsAcyltransferase
Model size2045
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037
KEGG koko:K13510
KEGG ReactionR01318,R03437,R03438,R09036
KEGG Pathwayko00564,ko00565,ko01100,map00564,map00565,map01100
Hectar predicted targeting categoryother localisation
Exons9
Evalue7.34e-28
EggNOG OGsCOG0204@1|root,KOG4666@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_003760.1
EC2.3.1.23,2.3.1.67
Description1-alkylglycerophosphocholine O-acetyltransferase activity
Cds size1689
COG categoryI
BRITEko00000,ko00001,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1983.1.2prot_P-wetherbeei_contig1983.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1983 1021..4125 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186182.6794317-UTR-P-wetherbeei_contig1983:578..6761683186182.6794317-UTR-P-wetherbeei_contig1983:578..676Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1983 579..676 +
1683186182.6912458-UTR-P-wetherbeei_contig1983:996..10201683186182.6912458-UTR-P-wetherbeei_contig1983:996..1020Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1983 997..1020 +
1683186182.7908561-UTR-P-wetherbeei_contig1983:4125..43591683186182.7908561-UTR-P-wetherbeei_contig1983:4125..4359Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1983 4126..4359 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186182.7138927-CDS-P-wetherbeei_contig1983:1020..13111683186182.7138927-CDS-P-wetherbeei_contig1983:1020..1311Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 1021..1311 +
1683186182.725845-CDS-P-wetherbeei_contig1983:1552..16991683186182.725845-CDS-P-wetherbeei_contig1983:1552..1699Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 1553..1699 +
1683186182.7358384-CDS-P-wetherbeei_contig1983:1807..18791683186182.7358384-CDS-P-wetherbeei_contig1983:1807..1879Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 1808..1879 +
1683186182.7453153-CDS-P-wetherbeei_contig1983:2035..21201683186182.7453153-CDS-P-wetherbeei_contig1983:2035..2120Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 2036..2120 +
1683186182.7551236-CDS-P-wetherbeei_contig1983:2332..28291683186182.7551236-CDS-P-wetherbeei_contig1983:2332..2829Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 2333..2829 +
1683186182.7653995-CDS-P-wetherbeei_contig1983:3089..32831683186182.7653995-CDS-P-wetherbeei_contig1983:3089..3283Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 3090..3283 +
1683186182.7735298-CDS-P-wetherbeei_contig1983:3521..35661683186182.7735298-CDS-P-wetherbeei_contig1983:3521..3566Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 3522..3566 +
1683186182.7814822-CDS-P-wetherbeei_contig1983:3767..41251683186182.7814822-CDS-P-wetherbeei_contig1983:3767..4125Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1983 3768..4125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1983.1.2

>prot_P-wetherbeei_contig1983.1.2 ID=prot_P-wetherbeei_contig1983.1.2|Name=mRNA_P-wetherbeei_contig1983.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=563bp
MATVTEREQHAAEGPPHPATSTDKSLPRPDDSLLPLLVPSTFEKVDETFK
PYVRLASREPATRPYELMRTAVCAVVLLPVRAVLMIVLGLLMTLVAKIAM
IGIPTDSVEGVFMPLSTPRAVALMVLRPMARVVLWCLGIWVICRKKVNWE
DLAEVAPKEQQPPVKSRYTKPFVVAANHLGYIDIAVLFVAYGGAFVAKDA
IANVPLVGTIARAIQTLFVRPKAHVADEIRERVLRSYEIHDHLFGTGSGS
SESGSGCSGDGGGGEGGGESSGSGSGGGVDGGESGSGVRAGGGGNKSGGE
GGGGGGGGRPAGGGAHGSTVHGREGCCGACLSTLVIFPEGTTTNGTAMVR
FRTGVFRAGMPVLPVAVVLPWRHFNPSWETISFKDHLFRTMTQLVNRVRL
VELPLYCPSPAERADPRLYADNVQASPSLHVLHQPVYPLNRRHKFVYHDF
VLGKKTAEEALQTARELTLQDPAIAAEAVEASAGAAATVTEPGTATTTVA
AATTTVTATAAEPGTATTTVAATTTTVTATAAALAGEAAPVAAAAAEAKE
EENQATHEPAVR*
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mRNA from alignment at P-wetherbeei_contig1983:579..4359+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1983.1.2 ID=mRNA_P-wetherbeei_contig1983.1.2|Name=mRNA_P-wetherbeei_contig1983.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3781bp|location=Sequence derived from alignment at P-wetherbeei_contig1983:579..4359+ (Phaeothamnion wetherbeei SAG_119_79)
TATTCTCTCACGGCACACAGCCACACAGCGTGTGCCCTCTCCTCGGTGAA GCAGACAGTGGCGGCACAATCCTCATCCAAGTTCGGCGGCCTCAAAAAGT GCGACCTTCTCTTGAAAGCTTTCAGTCTCCAGAACTTTCAAAAGGTTCAT CGATTTCTCTGCTCCTGAACCCGTTTTTGCTTCTCTTCGGAAGCGCTGTT TGTTTCTACTTCTGAGAGAAGCCGATGCGTCGCAGGGCAATAGAGAATTT AAACCCTGAAAGCAAGGGTCAGATGTGCATGTGAGATGTGCTGTAGCAGC GGCAGCGATATAGCCAAATCTAAAAGCACGCATTCTCCATCCAAGTTTTT TTCCTCTTTCGCACCTAAAGCTTATATTACCAAGCTCACTTTACCATTGA ATTCTTCTTCCCAAACAGAGCAAAGGAGTGAGATAGCGGACCATGGCGAC GGTCACGGAGCGCGAACAACACGCTGCTGAAGGCCCTCCGCACCCGGCCA CCTCTACGGACAAGTCACTGCCCCGCCCTGACGACAGTCTCCTGCCGCTG CTCGTTCCGAGCACCTTTGAAAAAGTCGACGAGACCTTCAAACCCTACGT GCGCCTGGCGTCGCGGGAGCCGGCCACCCGTCCATATGAGCTGATGCGCA CGGCAGTGTGCGCGGTGGTACTGCTTCCGGTGCGCGCCGTCCTCATGATC GTCCTGGGGCTTCTCATGACGCTGGTAGCGAAGGTGTGCCAAACCATGGC TTTTTAATCTGGTTGCGGGCATCTGGAATCCTTTTGCAGCTTCTACGTTA AACCATGTTCGGTCTTGGGTTGACGTGGCAAGCCGCCTTCGTTACTGCGT CTTTTGGCGTATTGTTAAAAGGTGGTTTGGGGTTGTTGCGTGCCTCGAAT GCTTTCTGGTCTGCACCAAAACGTTTCAATGCCACACTCATGTTTTCCGC CCCTCGTCGCGGCTACTCCCACAGATCGCGATGATAGGCATACCGACGGA TTCGGTGGAGGGTGTCTTCATGCCGCTGTCAACACCGCGCGCCGTGGCCC TTATGGTGCTGCGGCCCATGGCCCGCGTTGTGCTGTGGTGCTTGGGTATC TGGGTCATCTGCCGCAAAAAGGTATGTTCTGCTTCTTCTGACTTAGAGTT GGATCCTGTTCAGGCCGTCTCATCAAGGTCTGCTTTCTGAACGAGTGGTC TGCGTTCCTTGCGCGGCGCGGAAGGATAGGTGAACTGGGAGGACTTGGCG GAAGTGGCACCGAAGGAGCAGCAACCGCCAGTCAAGTCGCGCTACACCAA GGTGTGTTTTCGTTAAGCTGTTTGCGGTGTTTCCCTGTAATAAGGTTCTT TCTCTGTGGCGTTGTATTATTATTTGTTATGTCGCCATGCTGTCTATATC TGTTTTTCCTCCTTATTAATGACTCTGGTCGCCGCTTCTCAACTCCGTCC TATGCAGCCATTCGTTGTTGCTGCAAATCACCTGGGCTACATCGACATCG CCGTCCTCTTCGTAGCCTATGGCGGCGCCTTCGTTGCGAAAGGCTAGTTA ATGCTTCACATGGAGGTTTAACAACAGCACTGCTCCCTGTCTTCTTGAAT GCCTCTCAAACAATTGACGATTCTTCCACCAAGAGCAGAGGCGAGTATTA CATCAAAGTTGGCCGGCCCTTTCCGTTTTGCACTGACTGGTCCACTAACT TTTGCAATTGCCACCAACCGCCGCCGTTCGTCCATTCCCGCGATGTGCTT GCAGATGCCATCGCCAACGTTCCGCTCGTTGGCACCATCGCCCGCGCCAT CCAGACGCTCTTCGTGCGCCCGAAGGCCCACGTCGCCGACGAGATCCGGG AGCGCGTTTTGCGCTCGTATGAGATCCACGATCACCTGTTTGGCACCGGC AGTGGCAGCAGCGAGAGCGGCAGCGGCTGCAGTGGCGACGGCGGTGGCGG CGAGGGCGGCGGCGAAAGCAGCGGCAGCGGCAGTGGTGGCGGCGTTGACG GCGGCGAGAGCGGCAGTGGCGTCCGCGCTGGTGGCGGCGGCAATAAGAGC GGCGGTGAGGGTGGCGGTGGCGGCGGCGGCGGCCGTCCTGCCGGCGGCGG CGCCCATGGGTCGACTGTGCACGGGCGCGAGGGATGCTGCGGTGCGTGTC TTTCGACGCTGGTCATCTTCCCCGAGGGGACGACAACCAACGGGACTGCC ATGGTCCGCTTCCGCACGGGCGTGTTTCGTGCCGGGATGCCCGTCCTGCC GGTGCGCTGAATTAAGAAGTGCTGTGGGTTGTGTTAAGACAATTGCCCTT CATATTTGAAAGCAGGAGCTAACCATTGCGCCTGAGAGTACCATTTGCTT TGCAAATAGAACTTTGACTGTGAAGGAAACTCAAGAGGCCTTCGCCGTTA CCCGCGTGCTGCCTCCTATCGTTGTACCGCACGATGACTCGGCTTTACCA ACAACCCGTCATCAACATCCGCTCAACCCCCGTGCTTCCTCGCTTCCGTT CTCGGGGGCAGGTGGCCGTGGTGCTCCCGTGGCGGCATTTCAACCCGTCT TGGGAGACCATTTCCTTCAAAGACCATCTCTTCCGCACCATGACGCAGCT CGTCAACCGCGTCCGCCTCGTCGAGCTGCCACTGTACTGCCCGTCGCCGG CGGAGCGGGCCGACCCGCGCCTCTACGCCGACAACGTCCAGGCGAGTCCC TCTCTGTTCCGCAAACTTGGTGGCGACAGGCAAGGCCTGAAATTAGTTTA GTCTGGGAGGGAGATCTTGGCTCACGAGGATTCGCGGGAGTCCTTTGGTG CCTGCTTCCCTTTACCCAACATTCTGGAATCTCGCTAATTGTACGTGTGG TCCAAAGGATCGTTAAATCTTTGTTACTGACTTCTTTTTTTGTTTGGACC TCTGACGACTGTTTTTTGGGGGGCGCGTGCAGGCACTATTGAGTCACGTT CTTCACCAGCCTGTGTACCCGCTCAACAGACGTCACAAGTAAGCGTGCAT CTTCAGCTAAGATTCAGCTTCCCTTATCGGAAACATTAACATTTCTTTAC GACATCTCTTTTTTCATAGCGGCTGCAATCACTACCGCGCCGCTGAAGCC GCCGTGCCACAGCAGCCCCTGCCATTGCCCGCAATGCCACGCCTCAACTT CCATTTTTCTGCCACTTCCGGTCCCTGTTGCGGCTGCAGATTCGTCTACC ACGACTTCGTCCTCGGCAAGAAAACTGCGGAAGAGGCCCTACAGACGGCA CGAGAACTGACTTTACAGGACCCGGCCATCGCCGCCGAGGCGGTGGAGGC ATCGGCGGGAGCGGCGGCGACAGTGACGGAGCCGGGGACGGCGACGACGA CAGTGGCGGCGGCGACGACGACGGTGACGGCGACTGCCGCGGAGCCGGGG ACGGCGACGACGACAGTGGCGGCGACGACGACGACGGTGACGGCGACTGC CGCGGCGTTGGCAGGAGAAGCGGCACCGGTCGCAGCGGCGGCGGCGGAGG CGAAGGAAGAGGAGAATCAAGCAACGCACGAGCCAGCAGTCCGCTGATCG CTTGATGCTGGAGAAAGGAGGTCGATTGTGTCGGTGAGCTGAAAGTGGGT TCCCTGGGCCTTCGTTCGTGGAAGCATCGTGTTGTGCAGCAGGCAGGGTA GACGAATTTTTGCGTGGTTGTCCTAAACCTGGACGGGATTGGTCACCATC CCATTGTGAAAAGCCAGTCATGCATTGCCATCAAATCAGGGGAGAGTTTA CTGACAATAATGAAACGGGAATGCTCACTGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1983:579..4359+

>mRNA_P-wetherbeei_contig1983.1.2 ID=mRNA_P-wetherbeei_contig1983.1.2|Name=mRNA_P-wetherbeei_contig1983.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1689bp|location=Sequence derived from alignment at P-wetherbeei_contig1983:579..4359+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGGTCACGGAGCGCGAACAACACGCTGCTGAAGGCCCTCCGCA
CCCGGCCACCTCTACGGACAAGTCACTGCCCCGCCCTGACGACAGTCTCC
TGCCGCTGCTCGTTCCGAGCACCTTTGAAAAAGTCGACGAGACCTTCAAA
CCCTACGTGCGCCTGGCGTCGCGGGAGCCGGCCACCCGTCCATATGAGCT
GATGCGCACGGCAGTGTGCGCGGTGGTACTGCTTCCGGTGCGCGCCGTCC
TCATGATCGTCCTGGGGCTTCTCATGACGCTGGTAGCGAAGATCGCGATG
ATAGGCATACCGACGGATTCGGTGGAGGGTGTCTTCATGCCGCTGTCAAC
ACCGCGCGCCGTGGCCCTTATGGTGCTGCGGCCCATGGCCCGCGTTGTGC
TGTGGTGCTTGGGTATCTGGGTCATCTGCCGCAAAAAGGTGAACTGGGAG
GACTTGGCGGAAGTGGCACCGAAGGAGCAGCAACCGCCAGTCAAGTCGCG
CTACACCAAGCCATTCGTTGTTGCTGCAAATCACCTGGGCTACATCGACA
TCGCCGTCCTCTTCGTAGCCTATGGCGGCGCCTTCGTTGCGAAAGATGCC
ATCGCCAACGTTCCGCTCGTTGGCACCATCGCCCGCGCCATCCAGACGCT
CTTCGTGCGCCCGAAGGCCCACGTCGCCGACGAGATCCGGGAGCGCGTTT
TGCGCTCGTATGAGATCCACGATCACCTGTTTGGCACCGGCAGTGGCAGC
AGCGAGAGCGGCAGCGGCTGCAGTGGCGACGGCGGTGGCGGCGAGGGCGG
CGGCGAAAGCAGCGGCAGCGGCAGTGGTGGCGGCGTTGACGGCGGCGAGA
GCGGCAGTGGCGTCCGCGCTGGTGGCGGCGGCAATAAGAGCGGCGGTGAG
GGTGGCGGTGGCGGCGGCGGCGGCCGTCCTGCCGGCGGCGGCGCCCATGG
GTCGACTGTGCACGGGCGCGAGGGATGCTGCGGTGCGTGTCTTTCGACGC
TGGTCATCTTCCCCGAGGGGACGACAACCAACGGGACTGCCATGGTCCGC
TTCCGCACGGGCGTGTTTCGTGCCGGGATGCCCGTCCTGCCGGTGGCCGT
GGTGCTCCCGTGGCGGCATTTCAACCCGTCTTGGGAGACCATTTCCTTCA
AAGACCATCTCTTCCGCACCATGACGCAGCTCGTCAACCGCGTCCGCCTC
GTCGAGCTGCCACTGTACTGCCCGTCGCCGGCGGAGCGGGCCGACCCGCG
CCTCTACGCCGACAACGTCCAGGCGAGTCCCTCTCTTCACGTTCTTCACC
AGCCTGTGTACCCGCTCAACAGACGTCACAAATTCGTCTACCACGACTTC
GTCCTCGGCAAGAAAACTGCGGAAGAGGCCCTACAGACGGCACGAGAACT
GACTTTACAGGACCCGGCCATCGCCGCCGAGGCGGTGGAGGCATCGGCGG
GAGCGGCGGCGACAGTGACGGAGCCGGGGACGGCGACGACGACAGTGGCG
GCGGCGACGACGACGGTGACGGCGACTGCCGCGGAGCCGGGGACGGCGAC
GACGACAGTGGCGGCGACGACGACGACGGTGACGGCGACTGCCGCGGCGT
TGGCAGGAGAAGCGGCACCGGTCGCAGCGGCGGCGGCGGAGGCGAAGGAA
GAGGAGAATCAAGCAACGCACGAGCCAGCAGTCCGCTGA
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