mRNA_P-wetherbeei_contig19511.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Match: A0A7X8XJ65_9BURK (Ribosomal-processing cysteine protease Prp n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XJ65_9BURK) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-13 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 1 MIDIRLKRD-KGRVVALECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAEKASPPLQVAVGDGRFKVDLRKQPASEEA---YFLLGVIASSLEMLTRNYPGFVQLK 309
MI + ++RD +GR+ L CSGHA FD G+D+VCA VSAL GAL +GL + P+ ++ GD R V + + E A LL +L+ + NY G ++++
Sbjct: 1 MIQVGVRRDLRGRIRHLSCSGHARFDPEGGVDVVCAGVSALMGALAIGLTQVVGAPVSLSAGDARLLVRVPARMPEELAGPVQVLLETTVLALQEIQENYQGSLKIR 107
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Match: W6RW96_9CLOT (Uncharacterized protein n=2 Tax=Clostridium bornimense TaxID=1216932 RepID=W6RW96_9CLOT) HSP 1 Score: 50.1 bits (118), Expect = 1.280e-5 Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 1 MIDIRLKRDKGRVVALECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAEKASPPLQVAVGDGRFKVDLRK--QPASEEAYFLLGVIASSLEMLTRNYPGFVQL 306
MI I ++ ++++ SGHAGFD+ +G D+VC+AVS L+GA+ G+ E DG + L E+ L+ + SL+ L NY +V +
Sbjct: 1 MIKIDFQKHCDKLISFNISGHAGFDE-SGRDIVCSAVSVLSGAVINGVTEILKIDAPYDFSDGHMSISLSSLSDEEIEKCQVLMETMLVSLKSLEVNYKDYVNV 103
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Match: UPI001C029225 (ribosomal-processing cysteine protease Prp n=1 Tax=Coprococcus catus TaxID=116085 RepID=UPI001C029225) HSP 1 Score: 48.1 bits (113), Expect = 5.430e-5 Identity = 31/102 (30.39%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 1 MIDIRLKRDKGRVVALECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAEKASPPLQVAVGDGRFKVDLRKQPASEEAYFLLGVIASSLEMLTRNYPGFVQL 306
MIDI +++D+ L SGHAG+ +G D++CAAV+AL+G L + + ++ V G VD++ + SE+A L+ + ++ +PG++++
Sbjct: 1 MIDITVRKDR-----LTVSGHAGYA-ASGEDIICAAVTALSGTLVKSIEDLTDDKIEYDVQPGW--VDIKYRDLSEKAKALVDSFFIGICLVADEFPGYIRI 94
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Match: A0A851I1R1_9FUSO (Ribosomal-processing cysteine protease Prp n=1 Tax=Leptotrichia sp. oral taxon 223 TaxID=712363 RepID=A0A851I1R1_9FUSO) HSP 1 Score: 48.5 bits (114), Expect = 6.110e-5 Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 1 MIDIRLKRDKGRVVALECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAE--KASPPLQVAVGDGRFKVDLRKQPAS----EEAYFLLGVIASSLEMLTRNYPGFVQLKD 312
MI+I+++R K +++ E GHA F + G D++CAAVS+ GL E + L+ DG DL+ + E+A L+ + S L+ + ++Y FV+LK+
Sbjct: 1 MINIKIQRQKDKIIYFEIEGHADFSE-YGEDVICAAVSSAGQITVNGLIETLELKKKLKFTEEDGYIVCDLKNSGLTDDELEKADILVESMYSYLKEVAKSYSDFVKLKE 109
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Match: A0A6I4VYM2_9BACL (Ribosomal-processing cysteine protease Prp n=3 Tax=Shimazuella TaxID=471798 RepID=A0A6I4VYM2_9BACL) HSP 1 Score: 48.1 bits (113), Expect = 7.370e-5 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 1 MIDIRLKRDKGRVVA-LECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAEKASPPLQVAV---GDGRFKVDLRKQPA---SEEAYFLLGVIASSLEMLTRN----YPGFVQLKD 312
MI IR+KR++ +V ++ +GHA F + +G+D+VCAAVSA+T +G+ V + DG KVD R PA +EE LG++ ++++ + YP +VQ K
Sbjct: 1 MIRIRVKRNQAELVEQIKVTGHANFAE-HGMDIVCAAVSAVT----IGMVNAMEQITGVTIHQPDDGEGKVDCRV-PADLPTEEVRTQLGLLMRAMDLSLKGIADAYPDYVQYKQ 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19511.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19511.1.1 >prot_P-wetherbeei_contig19511.1.1 ID=prot_P-wetherbeei_contig19511.1.1|Name=mRNA_P-wetherbeei_contig19511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp MIDIRLKRDKGRVVALECSGHAGFDDGNGLDLVCAAVSALTGALGMGLAEback to top mRNA from alignment at P-wetherbeei_contig19511:145..462+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19511.1.1 ID=mRNA_P-wetherbeei_contig19511.1.1|Name=mRNA_P-wetherbeei_contig19511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig19511:145..462+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19511:145..462+ >mRNA_P-wetherbeei_contig19511.1.1 ID=mRNA_P-wetherbeei_contig19511.1.1|Name=mRNA_P-wetherbeei_contig19511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig19511:145..462+ (Phaeothamnion wetherbeei SAG_119_79)back to top |